Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X36:X35
Extra
PDB:
ATOM 1 O3' U A 35 -2.994 -11.547 12.094 1.00 46.70 O
ATOM 2 P C A 36 -3.700 -11.762 13.504 1.00 46.49 P
ATOM 3 OP1 C A 36 -5.019 -11.085 13.530 1.00 45.80 O
ATOM 4 OP2 C A 36 -2.675 -11.471 14.531 1.00 45.28 O
ATOM 5 O5' C A 36 -4.040 -13.311 13.469 1.00 46.83 O
ATOM 6 C5' C A 36 -3.028 -14.131 13.930 1.00 47.29 C
ATOM 7 C4' C A 36 -3.078 -15.507 13.321 1.00 47.17 C
ATOM 8 O4' C A 36 -2.402 -15.529 12.035 1.00 46.75 O
ATOM 9 C3' C A 36 -2.285 -16.414 14.231 1.00 46.86 C
ATOM 10 O3' C A 36 -3.203 -17.085 15.071 1.00 46.89 O
ATOM 11 C2' C A 36 -1.515 -17.295 13.254 1.00 46.82 C
ATOM 12 O2' C A 36 -2.289 -18.370 12.747 1.00 47.51 O
ATOM 13 C1' C A 36 -1.199 -16.272 12.157 1.00 45.95 C
ATOM 14 N1 C A 36 -0.029 -15.327 12.435 1.00 45.83 N
ATOM 15 C2 C A 36 1.232 -15.815 12.849 1.00 45.33 C
ATOM 16 O2 C A 36 1.409 -17.029 13.002 1.00 45.04 O
ATOM 17 N3 C A 36 2.240 -14.929 13.094 1.00 44.56 N
ATOM 18 C4 C A 36 2.046 -13.618 12.938 1.00 44.30 C
ATOM 19 N4 C A 36 3.071 -12.799 13.179 1.00 44.64 N
ATOM 20 C5 C A 36 0.791 -13.096 12.514 1.00 44.63 C
ATOM 21 C6 C A 36 -0.197 -13.971 12.275 1.00 45.44 C
ATOM 22 P U A 37 -3.392 -16.628 16.596 1.00 47.05 P
ATOM 23 OP1 U A 37 -4.411 -17.521 17.205 1.00 47.95 O
ATOM 24 OP2 U A 37 -3.600 -15.167 16.655 1.00 46.92 O
ATOM 25 O5' U A 37 -1.978 -16.979 17.247 1.00 47.24 O
TER
ATOM 1 O3' U B 34 -4.281 -6.379 8.510 1.00 49.03 O
ATOM 2 P U B 35 -4.715 -6.649 10.022 1.00 50.03 P
ATOM 3 OP1 U B 35 -6.172 -6.935 10.014 1.00 49.92 O
ATOM 4 OP2 U B 35 -4.181 -5.574 10.888 1.00 49.55 O
ATOM 5 O5' U B 35 -3.947 -7.997 10.373 1.00 48.90 O
ATOM 6 C5' U B 35 -4.221 -9.231 9.724 1.00 47.48 C
ATOM 7 C4' U B 35 -3.112 -10.179 10.132 1.00 47.41 C
ATOM 8 O4' U B 35 -1.857 -9.719 9.574 1.00 47.11 O
ATOM 9 C3' U B 35 -2.882 -10.220 11.639 1.00 47.28 C
ATOM 10 O3' U B 35 -2.994 -11.547 12.094 1.00 46.70 O
ATOM 11 C2' U B 35 -1.489 -9.630 11.851 1.00 47.26 C
ATOM 12 O2' U B 35 -0.784 -10.194 12.938 1.00 47.06 O
ATOM 13 C1' U B 35 -0.863 -10.026 10.522 1.00 48.30 C
ATOM 14 N1 U B 35 0.414 -9.345 10.156 1.00 48.29 N
ATOM 15 C2 U B 35 1.448 -10.127 9.687 1.00 48.50 C
ATOM 16 O2 U B 35 1.355 -11.336 9.560 1.00 49.15 O
ATOM 17 N3 U B 35 2.594 -9.435 9.365 1.00 48.75 N
ATOM 18 C4 U B 35 2.788 -8.064 9.468 1.00 48.76 C
ATOM 19 O4 U B 35 3.859 -7.572 9.145 1.00 49.37 O
ATOM 20 C5 U B 35 1.664 -7.316 9.967 1.00 49.16 C
ATOM 21 C6 U B 35 0.539 -7.973 10.280 1.00 48.72 C
ATOM 22 P C B 36 -3.700 -11.762 13.504 1.00 46.49 P
ATOM 23 OP1 C B 36 -5.019 -11.085 13.530 1.00 45.80 O
ATOM 24 OP2 C B 36 -2.675 -11.471 14.531 1.00 45.28 O
ATOM 25 O5' C B 36 -4.040 -13.311 13.469 1.00 46.83 O
TER
ATOM 2 P C A 36 -3.700 -11.762 13.504 1.00 46.49 P
ATOM 3 OP1 C A 36 -5.019 -11.085 13.530 1.00 45.80 O
ATOM 4 OP2 C A 36 -2.675 -11.471 14.531 1.00 45.28 O
ATOM 5 O5' C A 36 -4.040 -13.311 13.469 1.00 46.83 O
ATOM 6 C5' C A 36 -3.028 -14.131 13.930 1.00 47.29 C
ATOM 7 C4' C A 36 -3.078 -15.507 13.321 1.00 47.17 C
ATOM 8 O4' C A 36 -2.402 -15.529 12.035 1.00 46.75 O
ATOM 9 C3' C A 36 -2.285 -16.414 14.231 1.00 46.86 C
ATOM 10 O3' C A 36 -3.203 -17.085 15.071 1.00 46.89 O
ATOM 11 C2' C A 36 -1.515 -17.295 13.254 1.00 46.82 C
ATOM 12 O2' C A 36 -2.289 -18.370 12.747 1.00 47.51 O
ATOM 13 C1' C A 36 -1.199 -16.272 12.157 1.00 45.95 C
ATOM 14 N1 C A 36 -0.029 -15.327 12.435 1.00 45.83 N
ATOM 15 C2 C A 36 1.232 -15.815 12.849 1.00 45.33 C
ATOM 16 O2 C A 36 1.409 -17.029 13.002 1.00 45.04 O
ATOM 17 N3 C A 36 2.240 -14.929 13.094 1.00 44.56 N
ATOM 18 C4 C A 36 2.046 -13.618 12.938 1.00 44.30 C
ATOM 19 N4 C A 36 3.071 -12.799 13.179 1.00 44.64 N
ATOM 20 C5 C A 36 0.791 -13.096 12.514 1.00 44.63 C
ATOM 21 C6 C A 36 -0.197 -13.971 12.275 1.00 45.44 C
ATOM 22 P U A 37 -3.392 -16.628 16.596 1.00 47.05 P
ATOM 23 OP1 U A 37 -4.411 -17.521 17.205 1.00 47.95 O
ATOM 24 OP2 U A 37 -3.600 -15.167 16.655 1.00 46.92 O
ATOM 25 O5' U A 37 -1.978 -16.979 17.247 1.00 47.24 O
TER
ATOM 1 O3' U B 34 -4.281 -6.379 8.510 1.00 49.03 O
ATOM 2 P U B 35 -4.715 -6.649 10.022 1.00 50.03 P
ATOM 3 OP1 U B 35 -6.172 -6.935 10.014 1.00 49.92 O
ATOM 4 OP2 U B 35 -4.181 -5.574 10.888 1.00 49.55 O
ATOM 5 O5' U B 35 -3.947 -7.997 10.373 1.00 48.90 O
ATOM 6 C5' U B 35 -4.221 -9.231 9.724 1.00 47.48 C
ATOM 7 C4' U B 35 -3.112 -10.179 10.132 1.00 47.41 C
ATOM 8 O4' U B 35 -1.857 -9.719 9.574 1.00 47.11 O
ATOM 9 C3' U B 35 -2.882 -10.220 11.639 1.00 47.28 C
ATOM 10 O3' U B 35 -2.994 -11.547 12.094 1.00 46.70 O
ATOM 11 C2' U B 35 -1.489 -9.630 11.851 1.00 47.26 C
ATOM 12 O2' U B 35 -0.784 -10.194 12.938 1.00 47.06 O
ATOM 13 C1' U B 35 -0.863 -10.026 10.522 1.00 48.30 C
ATOM 14 N1 U B 35 0.414 -9.345 10.156 1.00 48.29 N
ATOM 15 C2 U B 35 1.448 -10.127 9.687 1.00 48.50 C
ATOM 16 O2 U B 35 1.355 -11.336 9.560 1.00 49.15 O
ATOM 17 N3 U B 35 2.594 -9.435 9.365 1.00 48.75 N
ATOM 18 C4 U B 35 2.788 -8.064 9.468 1.00 48.76 C
ATOM 19 O4 U B 35 3.859 -7.572 9.145 1.00 49.37 O
ATOM 20 C5 U B 35 1.664 -7.316 9.967 1.00 49.16 C
ATOM 21 C6 U B 35 0.539 -7.973 10.280 1.00 48.72 C
ATOM 22 P C B 36 -3.700 -11.762 13.504 1.00 46.49 P
ATOM 23 OP1 C B 36 -5.019 -11.085 13.530 1.00 45.80 O
ATOM 24 OP2 C B 36 -2.675 -11.471 14.531 1.00 45.28 O
ATOM 25 O5' C B 36 -4.040 -13.311 13.469 1.00 46.83 O
TER
Atoms:
C2: (1.232,-15.815,12.849)
OP1: (-5.019,-11.085,13.530)
OP2: (-2.675,-11.471,14.531)
C4: (2.046,-13.618,12.938)
O5': (-4.040,-13.311,13.469)
C3': (-2.285,-16.414,14.231)
C1': (-1.199,-16.272,12.157)
O4': (-2.402,-15.529,12.035)
C5': (-3.028,-14.131,13.930)
P: (-3.700,-11.762,13.504)
O2: (1.409,-17.029,13.002)
C4': (-3.078,-15.507,13.321)
C2': (-1.515,-17.295,13.254)
O2': (-2.289,-18.370,12.747)
N1: (-0.029,-15.327,12.435)
N3: (2.240,-14.929,13.094)
N4: (3.071,-12.799,13.179)
C6: (-0.197,-13.971,12.275)
C5: (0.791,-13.096,12.514)
O3': (-3.203,-17.085,15.071)
OP1: (-5.019,-11.085,13.530)
OP2: (-2.675,-11.471,14.531)
C4: (2.046,-13.618,12.938)
O5': (-4.040,-13.311,13.469)
C3': (-2.285,-16.414,14.231)
C1': (-1.199,-16.272,12.157)
O4': (-2.402,-15.529,12.035)
C5': (-3.028,-14.131,13.930)
P: (-3.700,-11.762,13.504)
O2: (1.409,-17.029,13.002)
C4': (-3.078,-15.507,13.321)
C2': (-1.515,-17.295,13.254)
O2': (-2.289,-18.370,12.747)
N1: (-0.029,-15.327,12.435)
N3: (2.240,-14.929,13.094)
N4: (3.071,-12.799,13.179)
C6: (-0.197,-13.971,12.275)
C5: (0.791,-13.096,12.514)
O3': (-3.203,-17.085,15.071)
C4: (2.788,-8.064,9.468)
N3: (2.594,-9.435,9.365)
OP1: (-6.172,-6.935,10.014)
OP2: (-4.181,-5.574,10.888)
C2: (1.448,-10.127,9.687)
C1': (-0.863,-10.026,10.522)
C3': (-2.882,-10.220,11.639)
O5': (-3.947,-7.997,10.373)
O4': (-1.857,-9.719,9.574)
C5': (-4.221,-9.231,9.724)
P: (-4.715,-6.649,10.022)
C4': (-3.112,-10.179,10.132)
C2': (-1.489,-9.630,11.851)
O2': (-0.784,-10.194,12.938)
N1: (0.414,-9.345,10.156)
O4: (3.859,-7.572,9.145)
O2: (1.355,-11.336,9.560)
C6: (0.539,-7.973,10.280)
C5: (1.664,-7.316,9.967)
O3': (-2.994,-11.547,12.094)
N3: (2.594,-9.435,9.365)
OP1: (-6.172,-6.935,10.014)
OP2: (-4.181,-5.574,10.888)
C2: (1.448,-10.127,9.687)
C1': (-0.863,-10.026,10.522)
C3': (-2.882,-10.220,11.639)
O5': (-3.947,-7.997,10.373)
O4': (-1.857,-9.719,9.574)
C5': (-4.221,-9.231,9.724)
P: (-4.715,-6.649,10.022)
C4': (-3.112,-10.179,10.132)
C2': (-1.489,-9.630,11.851)
O2': (-0.784,-10.194,12.938)
N1: (0.414,-9.345,10.156)
O4: (3.859,-7.572,9.145)
O2: (1.355,-11.336,9.560)
C6: (0.539,-7.973,10.280)
C5: (1.664,-7.316,9.967)
O3': (-2.994,-11.547,12.094)
Image (generated by PyMOL):