Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02396:02395
Extra
PDB:
ATOM 1 O3' U A2395 66.467 119.227 138.297 1.00 38.26 O
ATOM 2 P C A2396 67.904 118.584 138.567 1.00 40.83 P
ATOM 3 OP1 C A2396 68.455 118.056 137.294 1.00 42.66 O
ATOM 4 OP2 C A2396 67.773 117.684 139.736 1.00 41.99 O
ATOM 5 O5' C A2396 68.753 119.854 138.990 1.00 38.31 O
ATOM 6 C5' C A2396 70.160 119.904 138.799 1.00 36.01 C
ATOM 7 C4' C A2396 70.592 121.337 138.706 1.00 35.89 C
ATOM 8 O4' C A2396 70.208 121.886 137.420 1.00 36.99 O
ATOM 9 C3' C A2396 69.916 122.255 139.705 1.00 34.96 C
ATOM 10 O3' C A2396 70.525 122.164 140.977 1.00 34.50 O
ATOM 11 C2' C A2396 70.088 123.614 139.046 1.00 35.68 C
ATOM 12 O2' C A2396 71.394 124.130 139.194 1.00 34.42 O
ATOM 13 C1' C A2396 69.852 123.252 137.577 1.00 35.93 C
ATOM 14 N1 C A2396 68.445 123.420 137.169 1.00 36.95 N
ATOM 15 C2 C A2396 67.961 124.715 136.932 1.00 37.61 C
ATOM 16 O2 C A2396 68.731 125.681 137.068 1.00 37.90 O
ATOM 17 N3 C A2396 66.672 124.880 136.562 1.00 37.21 N
ATOM 18 C4 C A2396 65.875 123.821 136.424 1.00 36.84 C
ATOM 19 N4 C A2396 64.613 124.037 136.056 1.00 37.42 N
ATOM 20 C5 C A2396 66.339 122.493 136.658 1.00 37.39 C
ATOM 21 C6 C A2396 67.617 122.339 137.025 1.00 36.03 C
ATOM 22 P C A2397 69.640 122.348 142.302 1.00 35.87 P
ATOM 23 OP1 C A2397 70.536 121.991 143.427 1.00 35.80 O
ATOM 24 OP2 C A2397 68.339 121.643 142.149 1.00 35.17 O
ATOM 25 O5' C A2397 69.358 123.913 142.347 1.00 34.67 O
TER
ATOM 1 O3' A B2394 62.973 114.890 135.480 1.00 39.58 O
ATOM 2 P U B2395 62.965 115.625 136.909 1.00 42.68 P
ATOM 3 OP1 U B2395 64.216 115.202 137.594 1.00 41.95 O
ATOM 4 OP2 U B2395 61.651 115.394 137.569 1.00 42.66 O
ATOM 5 O5' U B2395 63.100 117.172 136.558 1.00 39.06 O
ATOM 6 C5' U B2395 64.227 117.658 135.812 1.00 38.05 C
ATOM 7 C4' U B2395 64.922 118.758 136.578 1.00 37.26 C
ATOM 8 O4' U B2395 64.022 119.888 136.728 1.00 37.15 O
ATOM 9 C3' U B2395 65.371 118.400 137.987 1.00 36.25 C
ATOM 10 O3' U B2395 66.467 119.227 138.297 1.00 38.26 O
ATOM 11 C2' U B2395 64.192 118.853 138.831 1.00 35.79 C
ATOM 12 O2' U B2395 64.562 119.150 140.159 1.00 37.00 O
ATOM 13 C1' U B2395 63.783 120.130 138.099 1.00 34.25 C
ATOM 14 N1 U B2395 62.367 120.501 138.255 1.00 32.00 N
ATOM 15 C2 U B2395 62.075 121.820 138.572 1.00 31.00 C
ATOM 16 O2 U B2395 62.931 122.679 138.718 1.00 29.87 O
ATOM 17 N3 U B2395 60.741 122.098 138.705 1.00 28.92 N
ATOM 18 C4 U B2395 59.695 121.221 138.552 1.00 29.44 C
ATOM 19 O4 U B2395 58.547 121.622 138.712 1.00 29.60 O
ATOM 20 C5 U B2395 60.075 119.885 138.222 1.00 29.82 C
ATOM 21 C6 U B2395 61.363 119.577 138.090 1.00 29.38 C
ATOM 22 P C B2396 67.904 118.584 138.567 1.00 40.83 P
ATOM 23 OP1 C B2396 68.455 118.056 137.294 1.00 42.66 O
ATOM 24 OP2 C B2396 67.773 117.684 139.736 1.00 41.99 O
ATOM 25 O5' C B2396 68.753 119.854 138.990 1.00 38.31 O
TER
ATOM 2 P C A2396 67.904 118.584 138.567 1.00 40.83 P
ATOM 3 OP1 C A2396 68.455 118.056 137.294 1.00 42.66 O
ATOM 4 OP2 C A2396 67.773 117.684 139.736 1.00 41.99 O
ATOM 5 O5' C A2396 68.753 119.854 138.990 1.00 38.31 O
ATOM 6 C5' C A2396 70.160 119.904 138.799 1.00 36.01 C
ATOM 7 C4' C A2396 70.592 121.337 138.706 1.00 35.89 C
ATOM 8 O4' C A2396 70.208 121.886 137.420 1.00 36.99 O
ATOM 9 C3' C A2396 69.916 122.255 139.705 1.00 34.96 C
ATOM 10 O3' C A2396 70.525 122.164 140.977 1.00 34.50 O
ATOM 11 C2' C A2396 70.088 123.614 139.046 1.00 35.68 C
ATOM 12 O2' C A2396 71.394 124.130 139.194 1.00 34.42 O
ATOM 13 C1' C A2396 69.852 123.252 137.577 1.00 35.93 C
ATOM 14 N1 C A2396 68.445 123.420 137.169 1.00 36.95 N
ATOM 15 C2 C A2396 67.961 124.715 136.932 1.00 37.61 C
ATOM 16 O2 C A2396 68.731 125.681 137.068 1.00 37.90 O
ATOM 17 N3 C A2396 66.672 124.880 136.562 1.00 37.21 N
ATOM 18 C4 C A2396 65.875 123.821 136.424 1.00 36.84 C
ATOM 19 N4 C A2396 64.613 124.037 136.056 1.00 37.42 N
ATOM 20 C5 C A2396 66.339 122.493 136.658 1.00 37.39 C
ATOM 21 C6 C A2396 67.617 122.339 137.025 1.00 36.03 C
ATOM 22 P C A2397 69.640 122.348 142.302 1.00 35.87 P
ATOM 23 OP1 C A2397 70.536 121.991 143.427 1.00 35.80 O
ATOM 24 OP2 C A2397 68.339 121.643 142.149 1.00 35.17 O
ATOM 25 O5' C A2397 69.358 123.913 142.347 1.00 34.67 O
TER
ATOM 1 O3' A B2394 62.973 114.890 135.480 1.00 39.58 O
ATOM 2 P U B2395 62.965 115.625 136.909 1.00 42.68 P
ATOM 3 OP1 U B2395 64.216 115.202 137.594 1.00 41.95 O
ATOM 4 OP2 U B2395 61.651 115.394 137.569 1.00 42.66 O
ATOM 5 O5' U B2395 63.100 117.172 136.558 1.00 39.06 O
ATOM 6 C5' U B2395 64.227 117.658 135.812 1.00 38.05 C
ATOM 7 C4' U B2395 64.922 118.758 136.578 1.00 37.26 C
ATOM 8 O4' U B2395 64.022 119.888 136.728 1.00 37.15 O
ATOM 9 C3' U B2395 65.371 118.400 137.987 1.00 36.25 C
ATOM 10 O3' U B2395 66.467 119.227 138.297 1.00 38.26 O
ATOM 11 C2' U B2395 64.192 118.853 138.831 1.00 35.79 C
ATOM 12 O2' U B2395 64.562 119.150 140.159 1.00 37.00 O
ATOM 13 C1' U B2395 63.783 120.130 138.099 1.00 34.25 C
ATOM 14 N1 U B2395 62.367 120.501 138.255 1.00 32.00 N
ATOM 15 C2 U B2395 62.075 121.820 138.572 1.00 31.00 C
ATOM 16 O2 U B2395 62.931 122.679 138.718 1.00 29.87 O
ATOM 17 N3 U B2395 60.741 122.098 138.705 1.00 28.92 N
ATOM 18 C4 U B2395 59.695 121.221 138.552 1.00 29.44 C
ATOM 19 O4 U B2395 58.547 121.622 138.712 1.00 29.60 O
ATOM 20 C5 U B2395 60.075 119.885 138.222 1.00 29.82 C
ATOM 21 C6 U B2395 61.363 119.577 138.090 1.00 29.38 C
ATOM 22 P C B2396 67.904 118.584 138.567 1.00 40.83 P
ATOM 23 OP1 C B2396 68.455 118.056 137.294 1.00 42.66 O
ATOM 24 OP2 C B2396 67.773 117.684 139.736 1.00 41.99 O
ATOM 25 O5' C B2396 68.753 119.854 138.990 1.00 38.31 O
TER
Atoms:
C2: (67.961,124.715,136.932)
OP1: (68.455,118.056,137.294)
OP2: (67.773,117.684,139.736)
C4: (65.875,123.821,136.424)
O5': (68.753,119.854,138.990)
C3': (69.916,122.255,139.705)
C1': (69.852,123.252,137.577)
O4': (70.208,121.886,137.420)
C5': (70.160,119.904,138.799)
P: (67.904,118.584,138.567)
O2: (68.731,125.681,137.068)
C4': (70.592,121.337,138.706)
C2': (70.088,123.614,139.046)
O2': (71.394,124.130,139.194)
N1: (68.445,123.420,137.169)
N3: (66.672,124.880,136.562)
N4: (64.613,124.037,136.056)
C6: (67.617,122.339,137.025)
C5: (66.339,122.493,136.658)
O3': (70.525,122.164,140.977)
OP1: (68.455,118.056,137.294)
OP2: (67.773,117.684,139.736)
C4: (65.875,123.821,136.424)
O5': (68.753,119.854,138.990)
C3': (69.916,122.255,139.705)
C1': (69.852,123.252,137.577)
O4': (70.208,121.886,137.420)
C5': (70.160,119.904,138.799)
P: (67.904,118.584,138.567)
O2: (68.731,125.681,137.068)
C4': (70.592,121.337,138.706)
C2': (70.088,123.614,139.046)
O2': (71.394,124.130,139.194)
N1: (68.445,123.420,137.169)
N3: (66.672,124.880,136.562)
N4: (64.613,124.037,136.056)
C6: (67.617,122.339,137.025)
C5: (66.339,122.493,136.658)
O3': (70.525,122.164,140.977)
C4: (59.695,121.221,138.552)
N3: (60.741,122.098,138.705)
OP1: (64.216,115.202,137.594)
OP2: (61.651,115.394,137.569)
C2: (62.075,121.820,138.572)
C1': (63.783,120.130,138.099)
C3': (65.371,118.400,137.987)
O5': (63.100,117.172,136.558)
O4': (64.022,119.888,136.728)
C5': (64.227,117.658,135.812)
P: (62.965,115.625,136.909)
C4': (64.922,118.758,136.578)
C2': (64.192,118.853,138.831)
O2': (64.562,119.150,140.159)
N1: (62.367,120.501,138.255)
O4: (58.547,121.622,138.712)
O2: (62.931,122.679,138.718)
C6: (61.363,119.577,138.090)
C5: (60.075,119.885,138.222)
O3': (66.467,119.227,138.297)
N3: (60.741,122.098,138.705)
OP1: (64.216,115.202,137.594)
OP2: (61.651,115.394,137.569)
C2: (62.075,121.820,138.572)
C1': (63.783,120.130,138.099)
C3': (65.371,118.400,137.987)
O5': (63.100,117.172,136.558)
O4': (64.022,119.888,136.728)
C5': (64.227,117.658,135.812)
P: (62.965,115.625,136.909)
C4': (64.922,118.758,136.578)
C2': (64.192,118.853,138.831)
O2': (64.562,119.150,140.159)
N1: (62.367,120.501,138.255)
O4: (58.547,121.622,138.712)
O2: (62.931,122.679,138.718)
C6: (61.363,119.577,138.090)
C5: (60.075,119.885,138.222)
O3': (66.467,119.227,138.297)
Image (generated by PyMOL):