Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0970:0968
Extra
PDB:
ATOM 1 O3' C A 969 57.988 52.651 110.646 1.00 49.67 O
ATOM 2 P C A 970 56.728 53.243 109.850 1.00 51.31 P
ATOM 3 OP1 C A 970 55.858 52.107 109.449 1.00 51.99 O
ATOM 4 OP2 C A 970 57.253 54.179 108.806 1.00 50.10 O
ATOM 5 O5' C A 970 55.951 54.064 110.973 1.00 45.77 O
ATOM 6 C5' C A 970 54.729 54.746 110.690 1.00 41.94 C
ATOM 7 C4' C A 970 54.162 55.315 111.965 1.00 42.67 C
ATOM 8 O4' C A 970 55.155 56.140 112.631 1.00 43.48 O
ATOM 9 C3' C A 970 52.977 56.240 111.785 1.00 41.98 C
ATOM 10 O3' C A 970 51.781 55.506 111.633 1.00 41.01 O
ATOM 11 C2' C A 970 53.007 57.055 113.068 1.00 43.06 C
ATOM 12 O2' C A 970 52.480 56.361 114.181 1.00 44.35 O
ATOM 13 C1' C A 970 54.513 57.240 113.263 1.00 44.42 C
ATOM 14 N1 C A 970 55.034 58.505 112.688 1.00 45.69 N
ATOM 15 C2 C A 970 54.570 59.727 113.202 1.00 45.90 C
ATOM 16 O2 C A 970 53.714 59.720 114.098 1.00 47.73 O
ATOM 17 N3 C A 970 55.064 60.884 112.710 1.00 46.03 N
ATOM 18 C4 C A 970 55.981 60.860 111.743 1.00 46.62 C
ATOM 19 N4 C A 970 56.458 62.033 111.307 1.00 47.35 N
ATOM 20 C5 C A 970 56.456 59.637 111.184 1.00 46.54 C
ATOM 21 C6 C A 970 55.960 58.495 111.679 1.00 46.36 C
ATOM 22 P A A 971 50.903 55.702 110.310 1.00 41.05 P
ATOM 23 OP1 A A 971 49.714 54.817 110.410 1.00 41.59 O
ATOM 24 OP2 A A 971 51.816 55.576 109.147 1.00 40.90 O
ATOM 25 O5' A A 971 50.402 57.208 110.422 1.00 41.86 O
TER
ATOM 1 O3' C B 967 65.644 62.523 107.919 1.00 37.05 O
ATOM 2 P U B 968 64.433 61.694 107.234 1.00 37.82 P
ATOM 3 OP1 U B 968 65.029 60.712 106.302 1.00 36.93 O
ATOM 4 OP2 U B 968 63.426 62.658 106.725 1.00 40.22 O
ATOM 5 O5' U B 968 63.730 60.903 108.425 1.00 38.49 O
ATOM 6 C5' U B 968 64.353 59.765 109.041 1.00 41.10 C
ATOM 7 C4' U B 968 63.388 59.092 109.993 1.00 43.71 C
ATOM 8 O4' U B 968 62.940 60.064 110.980 1.00 44.98 O
ATOM 9 C3' U B 968 62.120 58.506 109.377 1.00 44.49 C
ATOM 10 O3' U B 968 61.725 57.372 110.135 1.00 46.90 O
ATOM 11 C2' U B 968 61.099 59.620 109.587 1.00 44.68 C
ATOM 12 O2' U B 968 59.771 59.143 109.662 1.00 43.13 O
ATOM 13 C1' U B 968 61.530 60.171 110.941 1.00 45.29 C
ATOM 14 N1 U B 968 61.164 61.579 111.157 1.00 47.09 N
ATOM 15 C2 U B 968 60.107 61.852 112.013 1.00 48.74 C
ATOM 16 O2 U B 968 59.449 60.983 112.558 1.00 48.65 O
ATOM 17 N3 U B 968 59.847 63.188 112.203 1.00 50.15 N
ATOM 18 C4 U B 968 60.510 64.255 111.628 1.00 49.71 C
ATOM 19 O4 U B 968 60.169 65.407 111.907 1.00 49.41 O
ATOM 20 C5 U B 968 61.570 63.888 110.742 1.00 49.08 C
ATOM 21 C6 U B 968 61.852 62.597 110.541 1.00 47.62 C
ATOM 22 P C B 969 61.665 55.921 109.448 1.00 49.34 P
ATOM 23 OP1 C B 969 63.047 55.379 109.402 1.00 46.87 O
ATOM 24 OP2 C B 969 60.881 56.023 108.190 1.00 49.90 O
ATOM 25 O5' C B 969 60.802 55.087 110.498 1.00 48.51 O
TER
ATOM 2 P C A 970 56.728 53.243 109.850 1.00 51.31 P
ATOM 3 OP1 C A 970 55.858 52.107 109.449 1.00 51.99 O
ATOM 4 OP2 C A 970 57.253 54.179 108.806 1.00 50.10 O
ATOM 5 O5' C A 970 55.951 54.064 110.973 1.00 45.77 O
ATOM 6 C5' C A 970 54.729 54.746 110.690 1.00 41.94 C
ATOM 7 C4' C A 970 54.162 55.315 111.965 1.00 42.67 C
ATOM 8 O4' C A 970 55.155 56.140 112.631 1.00 43.48 O
ATOM 9 C3' C A 970 52.977 56.240 111.785 1.00 41.98 C
ATOM 10 O3' C A 970 51.781 55.506 111.633 1.00 41.01 O
ATOM 11 C2' C A 970 53.007 57.055 113.068 1.00 43.06 C
ATOM 12 O2' C A 970 52.480 56.361 114.181 1.00 44.35 O
ATOM 13 C1' C A 970 54.513 57.240 113.263 1.00 44.42 C
ATOM 14 N1 C A 970 55.034 58.505 112.688 1.00 45.69 N
ATOM 15 C2 C A 970 54.570 59.727 113.202 1.00 45.90 C
ATOM 16 O2 C A 970 53.714 59.720 114.098 1.00 47.73 O
ATOM 17 N3 C A 970 55.064 60.884 112.710 1.00 46.03 N
ATOM 18 C4 C A 970 55.981 60.860 111.743 1.00 46.62 C
ATOM 19 N4 C A 970 56.458 62.033 111.307 1.00 47.35 N
ATOM 20 C5 C A 970 56.456 59.637 111.184 1.00 46.54 C
ATOM 21 C6 C A 970 55.960 58.495 111.679 1.00 46.36 C
ATOM 22 P A A 971 50.903 55.702 110.310 1.00 41.05 P
ATOM 23 OP1 A A 971 49.714 54.817 110.410 1.00 41.59 O
ATOM 24 OP2 A A 971 51.816 55.576 109.147 1.00 40.90 O
ATOM 25 O5' A A 971 50.402 57.208 110.422 1.00 41.86 O
TER
ATOM 1 O3' C B 967 65.644 62.523 107.919 1.00 37.05 O
ATOM 2 P U B 968 64.433 61.694 107.234 1.00 37.82 P
ATOM 3 OP1 U B 968 65.029 60.712 106.302 1.00 36.93 O
ATOM 4 OP2 U B 968 63.426 62.658 106.725 1.00 40.22 O
ATOM 5 O5' U B 968 63.730 60.903 108.425 1.00 38.49 O
ATOM 6 C5' U B 968 64.353 59.765 109.041 1.00 41.10 C
ATOM 7 C4' U B 968 63.388 59.092 109.993 1.00 43.71 C
ATOM 8 O4' U B 968 62.940 60.064 110.980 1.00 44.98 O
ATOM 9 C3' U B 968 62.120 58.506 109.377 1.00 44.49 C
ATOM 10 O3' U B 968 61.725 57.372 110.135 1.00 46.90 O
ATOM 11 C2' U B 968 61.099 59.620 109.587 1.00 44.68 C
ATOM 12 O2' U B 968 59.771 59.143 109.662 1.00 43.13 O
ATOM 13 C1' U B 968 61.530 60.171 110.941 1.00 45.29 C
ATOM 14 N1 U B 968 61.164 61.579 111.157 1.00 47.09 N
ATOM 15 C2 U B 968 60.107 61.852 112.013 1.00 48.74 C
ATOM 16 O2 U B 968 59.449 60.983 112.558 1.00 48.65 O
ATOM 17 N3 U B 968 59.847 63.188 112.203 1.00 50.15 N
ATOM 18 C4 U B 968 60.510 64.255 111.628 1.00 49.71 C
ATOM 19 O4 U B 968 60.169 65.407 111.907 1.00 49.41 O
ATOM 20 C5 U B 968 61.570 63.888 110.742 1.00 49.08 C
ATOM 21 C6 U B 968 61.852 62.597 110.541 1.00 47.62 C
ATOM 22 P C B 969 61.665 55.921 109.448 1.00 49.34 P
ATOM 23 OP1 C B 969 63.047 55.379 109.402 1.00 46.87 O
ATOM 24 OP2 C B 969 60.881 56.023 108.190 1.00 49.90 O
ATOM 25 O5' C B 969 60.802 55.087 110.498 1.00 48.51 O
TER
Atoms:
C2: (54.570,59.727,113.202)
OP1: (55.858,52.107,109.449)
OP2: (57.253,54.179,108.806)
C4: (55.981,60.860,111.743)
O5': (55.951,54.064,110.973)
C3': (52.977,56.240,111.785)
C1': (54.513,57.240,113.263)
O4': (55.155,56.140,112.631)
C5': (54.729,54.746,110.690)
P: (56.728,53.243,109.850)
O2: (53.714,59.720,114.098)
C4': (54.162,55.315,111.965)
C2': (53.007,57.055,113.068)
O2': (52.480,56.361,114.181)
N1: (55.034,58.505,112.688)
N3: (55.064,60.884,112.710)
N4: (56.458,62.033,111.307)
C6: (55.960,58.495,111.679)
C5: (56.456,59.637,111.184)
O3': (51.781,55.506,111.633)
OP1: (55.858,52.107,109.449)
OP2: (57.253,54.179,108.806)
C4: (55.981,60.860,111.743)
O5': (55.951,54.064,110.973)
C3': (52.977,56.240,111.785)
C1': (54.513,57.240,113.263)
O4': (55.155,56.140,112.631)
C5': (54.729,54.746,110.690)
P: (56.728,53.243,109.850)
O2: (53.714,59.720,114.098)
C4': (54.162,55.315,111.965)
C2': (53.007,57.055,113.068)
O2': (52.480,56.361,114.181)
N1: (55.034,58.505,112.688)
N3: (55.064,60.884,112.710)
N4: (56.458,62.033,111.307)
C6: (55.960,58.495,111.679)
C5: (56.456,59.637,111.184)
O3': (51.781,55.506,111.633)
C4: (60.510,64.255,111.628)
N3: (59.847,63.188,112.203)
OP1: (65.029,60.712,106.302)
OP2: (63.426,62.658,106.725)
C2: (60.107,61.852,112.013)
C1': (61.530,60.171,110.941)
C3': (62.120,58.506,109.377)
O5': (63.730,60.903,108.425)
O4': (62.940,60.064,110.980)
C5': (64.353,59.765,109.041)
P: (64.433,61.694,107.234)
C4': (63.388,59.092,109.993)
C2': (61.099,59.620,109.587)
O2': (59.771,59.143,109.662)
N1: (61.164,61.579,111.157)
O4: (60.169,65.407,111.907)
O2: (59.449,60.983,112.558)
C6: (61.852,62.597,110.541)
C5: (61.570,63.888,110.742)
O3': (61.725,57.372,110.135)
N3: (59.847,63.188,112.203)
OP1: (65.029,60.712,106.302)
OP2: (63.426,62.658,106.725)
C2: (60.107,61.852,112.013)
C1': (61.530,60.171,110.941)
C3': (62.120,58.506,109.377)
O5': (63.730,60.903,108.425)
O4': (62.940,60.064,110.980)
C5': (64.353,59.765,109.041)
P: (64.433,61.694,107.234)
C4': (63.388,59.092,109.993)
C2': (61.099,59.620,109.587)
O2': (59.771,59.143,109.662)
N1: (61.164,61.579,111.157)
O4: (60.169,65.407,111.907)
O2: (59.449,60.983,112.558)
C6: (61.852,62.597,110.541)
C5: (61.570,63.888,110.742)
O3': (61.725,57.372,110.135)
Image (generated by PyMOL):