Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02396:02395
Extra
PDB:
ATOM 1 O3' U A2395 66.335 119.561 138.721 1.00 48.00 O
ATOM 2 P C A2396 67.738 118.880 139.015 1.00 49.08 P
ATOM 3 OP1 C A2396 68.252 118.295 137.756 1.00 50.52 O
ATOM 4 OP2 C A2396 67.496 118.007 140.182 1.00 49.52 O
ATOM 5 O5' C A2396 68.629 120.131 139.420 1.00 47.46 O
ATOM 6 C5' C A2396 70.059 120.110 139.318 1.00 46.06 C
ATOM 7 C4' C A2396 70.578 121.525 139.217 1.00 45.69 C
ATOM 8 O4' C A2396 70.266 122.071 137.903 1.00 46.46 O
ATOM 9 C3' C A2396 69.942 122.520 140.178 1.00 44.58 C
ATOM 10 O3' C A2396 70.476 122.443 141.492 1.00 44.14 O
ATOM 11 C2' C A2396 70.220 123.843 139.477 1.00 45.44 C
ATOM 12 O2' C A2396 71.561 124.274 139.598 1.00 45.64 O
ATOM 13 C1' C A2396 69.957 123.457 138.020 1.00 44.50 C
ATOM 14 N1 C A2396 68.542 123.670 137.627 1.00 43.49 N
ATOM 15 C2 C A2396 68.070 124.988 137.455 1.00 42.58 C
ATOM 16 O2 C A2396 68.842 125.939 137.641 1.00 43.16 O
ATOM 17 N3 C A2396 66.787 125.187 137.089 1.00 41.60 N
ATOM 18 C4 C A2396 65.979 124.147 136.887 1.00 41.30 C
ATOM 19 N4 C A2396 64.737 124.401 136.496 1.00 39.67 N
ATOM 20 C5 C A2396 66.418 122.802 137.068 1.00 41.89 C
ATOM 21 C6 C A2396 67.695 122.610 137.433 1.00 42.75 C
ATOM 22 P C A2397 69.530 122.742 142.763 1.00 45.71 P
ATOM 23 OP1 C A2397 70.352 122.472 143.964 1.00 46.80 O
ATOM 24 OP2 C A2397 68.206 122.080 142.627 1.00 43.64 O
ATOM 25 O5' C A2397 69.285 124.311 142.677 1.00 47.09 O
TER
ATOM 1 O3' A B2394 63.007 115.278 135.869 1.00 43.65 O
ATOM 2 P U B2395 63.017 115.934 137.330 1.00 46.47 P
ATOM 3 OP1 U B2395 64.314 115.566 137.931 1.00 46.20 O
ATOM 4 OP2 U B2395 61.766 115.570 138.028 1.00 47.73 O
ATOM 5 O5' U B2395 63.019 117.498 137.042 1.00 44.57 O
ATOM 6 C5' U B2395 64.051 118.091 136.234 1.00 44.52 C
ATOM 7 C4' U B2395 64.767 119.164 137.013 1.00 44.49 C
ATOM 8 O4' U B2395 63.896 120.309 137.207 1.00 44.99 O
ATOM 9 C3' U B2395 65.225 118.761 138.403 1.00 45.30 C
ATOM 10 O3' U B2395 66.335 119.561 138.721 1.00 48.00 O
ATOM 11 C2' U B2395 64.062 119.202 139.275 1.00 44.11 C
ATOM 12 O2' U B2395 64.470 119.429 140.607 1.00 44.16 O
ATOM 13 C1' U B2395 63.659 120.508 138.585 1.00 42.41 C
ATOM 14 N1 U B2395 62.241 120.865 138.738 1.00 41.29 N
ATOM 15 C2 U B2395 61.924 122.175 139.058 1.00 40.20 C
ATOM 16 O2 U B2395 62.760 123.051 139.218 1.00 39.54 O
ATOM 17 N3 U B2395 60.584 122.423 139.182 1.00 39.17 N
ATOM 18 C4 U B2395 59.557 121.521 139.022 1.00 39.51 C
ATOM 19 O4 U B2395 58.410 121.869 139.270 1.00 41.66 O
ATOM 20 C5 U B2395 59.963 120.201 138.681 1.00 39.82 C
ATOM 21 C6 U B2395 61.254 119.922 138.559 1.00 40.77 C
ATOM 22 P C B2396 67.738 118.880 139.015 1.00 49.08 P
ATOM 23 OP1 C B2396 68.252 118.295 137.756 1.00 50.52 O
ATOM 24 OP2 C B2396 67.496 118.007 140.182 1.00 49.52 O
ATOM 25 O5' C B2396 68.629 120.131 139.420 1.00 47.46 O
TER
ATOM 2 P C A2396 67.738 118.880 139.015 1.00 49.08 P
ATOM 3 OP1 C A2396 68.252 118.295 137.756 1.00 50.52 O
ATOM 4 OP2 C A2396 67.496 118.007 140.182 1.00 49.52 O
ATOM 5 O5' C A2396 68.629 120.131 139.420 1.00 47.46 O
ATOM 6 C5' C A2396 70.059 120.110 139.318 1.00 46.06 C
ATOM 7 C4' C A2396 70.578 121.525 139.217 1.00 45.69 C
ATOM 8 O4' C A2396 70.266 122.071 137.903 1.00 46.46 O
ATOM 9 C3' C A2396 69.942 122.520 140.178 1.00 44.58 C
ATOM 10 O3' C A2396 70.476 122.443 141.492 1.00 44.14 O
ATOM 11 C2' C A2396 70.220 123.843 139.477 1.00 45.44 C
ATOM 12 O2' C A2396 71.561 124.274 139.598 1.00 45.64 O
ATOM 13 C1' C A2396 69.957 123.457 138.020 1.00 44.50 C
ATOM 14 N1 C A2396 68.542 123.670 137.627 1.00 43.49 N
ATOM 15 C2 C A2396 68.070 124.988 137.455 1.00 42.58 C
ATOM 16 O2 C A2396 68.842 125.939 137.641 1.00 43.16 O
ATOM 17 N3 C A2396 66.787 125.187 137.089 1.00 41.60 N
ATOM 18 C4 C A2396 65.979 124.147 136.887 1.00 41.30 C
ATOM 19 N4 C A2396 64.737 124.401 136.496 1.00 39.67 N
ATOM 20 C5 C A2396 66.418 122.802 137.068 1.00 41.89 C
ATOM 21 C6 C A2396 67.695 122.610 137.433 1.00 42.75 C
ATOM 22 P C A2397 69.530 122.742 142.763 1.00 45.71 P
ATOM 23 OP1 C A2397 70.352 122.472 143.964 1.00 46.80 O
ATOM 24 OP2 C A2397 68.206 122.080 142.627 1.00 43.64 O
ATOM 25 O5' C A2397 69.285 124.311 142.677 1.00 47.09 O
TER
ATOM 1 O3' A B2394 63.007 115.278 135.869 1.00 43.65 O
ATOM 2 P U B2395 63.017 115.934 137.330 1.00 46.47 P
ATOM 3 OP1 U B2395 64.314 115.566 137.931 1.00 46.20 O
ATOM 4 OP2 U B2395 61.766 115.570 138.028 1.00 47.73 O
ATOM 5 O5' U B2395 63.019 117.498 137.042 1.00 44.57 O
ATOM 6 C5' U B2395 64.051 118.091 136.234 1.00 44.52 C
ATOM 7 C4' U B2395 64.767 119.164 137.013 1.00 44.49 C
ATOM 8 O4' U B2395 63.896 120.309 137.207 1.00 44.99 O
ATOM 9 C3' U B2395 65.225 118.761 138.403 1.00 45.30 C
ATOM 10 O3' U B2395 66.335 119.561 138.721 1.00 48.00 O
ATOM 11 C2' U B2395 64.062 119.202 139.275 1.00 44.11 C
ATOM 12 O2' U B2395 64.470 119.429 140.607 1.00 44.16 O
ATOM 13 C1' U B2395 63.659 120.508 138.585 1.00 42.41 C
ATOM 14 N1 U B2395 62.241 120.865 138.738 1.00 41.29 N
ATOM 15 C2 U B2395 61.924 122.175 139.058 1.00 40.20 C
ATOM 16 O2 U B2395 62.760 123.051 139.218 1.00 39.54 O
ATOM 17 N3 U B2395 60.584 122.423 139.182 1.00 39.17 N
ATOM 18 C4 U B2395 59.557 121.521 139.022 1.00 39.51 C
ATOM 19 O4 U B2395 58.410 121.869 139.270 1.00 41.66 O
ATOM 20 C5 U B2395 59.963 120.201 138.681 1.00 39.82 C
ATOM 21 C6 U B2395 61.254 119.922 138.559 1.00 40.77 C
ATOM 22 P C B2396 67.738 118.880 139.015 1.00 49.08 P
ATOM 23 OP1 C B2396 68.252 118.295 137.756 1.00 50.52 O
ATOM 24 OP2 C B2396 67.496 118.007 140.182 1.00 49.52 O
ATOM 25 O5' C B2396 68.629 120.131 139.420 1.00 47.46 O
TER
Atoms:
C2: (68.070,124.988,137.455)
OP1: (68.252,118.295,137.756)
OP2: (67.496,118.007,140.182)
C4: (65.979,124.147,136.887)
O5': (68.629,120.131,139.420)
C3': (69.942,122.520,140.178)
C1': (69.957,123.457,138.020)
O4': (70.266,122.071,137.903)
C5': (70.059,120.110,139.318)
P: (67.738,118.880,139.015)
O2: (68.842,125.939,137.641)
C4': (70.578,121.525,139.217)
C2': (70.220,123.843,139.477)
O2': (71.561,124.274,139.598)
N1: (68.542,123.670,137.627)
N3: (66.787,125.187,137.089)
N4: (64.737,124.401,136.496)
C6: (67.695,122.610,137.433)
C5: (66.418,122.802,137.068)
O3': (70.476,122.443,141.492)
OP1: (68.252,118.295,137.756)
OP2: (67.496,118.007,140.182)
C4: (65.979,124.147,136.887)
O5': (68.629,120.131,139.420)
C3': (69.942,122.520,140.178)
C1': (69.957,123.457,138.020)
O4': (70.266,122.071,137.903)
C5': (70.059,120.110,139.318)
P: (67.738,118.880,139.015)
O2: (68.842,125.939,137.641)
C4': (70.578,121.525,139.217)
C2': (70.220,123.843,139.477)
O2': (71.561,124.274,139.598)
N1: (68.542,123.670,137.627)
N3: (66.787,125.187,137.089)
N4: (64.737,124.401,136.496)
C6: (67.695,122.610,137.433)
C5: (66.418,122.802,137.068)
O3': (70.476,122.443,141.492)
C4: (59.557,121.521,139.022)
N3: (60.584,122.423,139.182)
OP1: (64.314,115.566,137.931)
OP2: (61.766,115.570,138.028)
C2: (61.924,122.175,139.058)
C1': (63.659,120.508,138.585)
C3': (65.225,118.761,138.403)
O5': (63.019,117.498,137.042)
O4': (63.896,120.309,137.207)
C5': (64.051,118.091,136.234)
P: (63.017,115.934,137.330)
C4': (64.767,119.164,137.013)
C2': (64.062,119.202,139.275)
O2': (64.470,119.429,140.607)
N1: (62.241,120.865,138.738)
O4: (58.410,121.869,139.270)
O2: (62.760,123.051,139.218)
C6: (61.254,119.922,138.559)
C5: (59.963,120.201,138.681)
O3': (66.335,119.561,138.721)
N3: (60.584,122.423,139.182)
OP1: (64.314,115.566,137.931)
OP2: (61.766,115.570,138.028)
C2: (61.924,122.175,139.058)
C1': (63.659,120.508,138.585)
C3': (65.225,118.761,138.403)
O5': (63.019,117.498,137.042)
O4': (63.896,120.309,137.207)
C5': (64.051,118.091,136.234)
P: (63.017,115.934,137.330)
C4': (64.767,119.164,137.013)
C2': (64.062,119.202,139.275)
O2': (64.470,119.429,140.607)
N1: (62.241,120.865,138.738)
O4: (58.410,121.869,139.270)
O2: (62.760,123.051,139.218)
C6: (61.254,119.922,138.559)
C5: (59.963,120.201,138.681)
O3': (66.335,119.561,138.721)
Image (generated by PyMOL):