Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0970:0968
Extra
PDB:
ATOM 1 O3' C A 969 58.323 52.922 111.080 1.00 50.86 O
ATOM 2 P C A 970 57.106 53.530 110.228 1.00 52.98 P
ATOM 3 OP1 C A 970 56.208 52.430 109.803 1.00 53.83 O
ATOM 4 OP2 C A 970 57.698 54.437 109.196 1.00 51.23 O
ATOM 5 O5' C A 970 56.313 54.370 111.331 1.00 50.00 O
ATOM 6 C5' C A 970 55.032 54.955 111.069 1.00 46.07 C
ATOM 7 C4' C A 970 54.456 55.514 112.347 1.00 46.20 C
ATOM 8 O4' C A 970 55.437 56.345 113.018 1.00 47.00 O
ATOM 9 C3' C A 970 53.263 56.429 112.178 1.00 46.05 C
ATOM 10 O3' C A 970 52.070 55.687 112.035 1.00 45.95 O
ATOM 11 C2' C A 970 53.282 57.224 113.473 1.00 46.58 C
ATOM 12 O2' C A 970 52.785 56.488 114.567 1.00 49.29 O
ATOM 13 C1' C A 970 54.782 57.423 113.676 1.00 47.63 C
ATOM 14 N1 C A 970 55.274 58.704 113.121 1.00 49.76 N
ATOM 15 C2 C A 970 54.860 59.911 113.716 1.00 49.74 C
ATOM 16 O2 C A 970 54.090 59.876 114.681 1.00 50.14 O
ATOM 17 N3 C A 970 55.313 61.081 113.221 1.00 50.14 N
ATOM 18 C4 C A 970 56.144 61.087 112.176 1.00 51.30 C
ATOM 19 N4 C A 970 56.568 62.273 111.720 1.00 52.99 N
ATOM 20 C5 C A 970 56.579 59.881 111.550 1.00 50.43 C
ATOM 21 C6 C A 970 56.125 58.726 112.047 1.00 50.37 C
ATOM 22 P A A 971 51.100 55.984 110.797 1.00 45.77 P
ATOM 23 OP1 A A 971 49.903 55.098 110.944 1.00 42.69 O
ATOM 24 OP2 A A 971 51.929 55.910 109.564 1.00 42.12 O
ATOM 25 O5' A A 971 50.678 57.505 111.020 1.00 45.61 O
TER
ATOM 1 O3' C B 967 65.814 62.804 108.339 1.00 40.61 O
ATOM 2 P U B 968 64.586 61.986 107.664 1.00 42.48 P
ATOM 3 OP1 U B 968 65.160 60.988 106.731 1.00 37.36 O
ATOM 4 OP2 U B 968 63.601 62.974 107.157 1.00 43.47 O
ATOM 5 O5' U B 968 63.876 61.205 108.859 1.00 41.86 O
ATOM 6 C5' U B 968 64.481 60.045 109.455 1.00 44.42 C
ATOM 7 C4' U B 968 63.514 59.364 110.399 1.00 45.51 C
ATOM 8 O4' U B 968 63.073 60.323 111.396 1.00 46.48 O
ATOM 9 C3' U B 968 62.244 58.782 109.786 1.00 46.94 C
ATOM 10 O3' U B 968 61.859 57.641 110.540 1.00 48.85 O
ATOM 11 C2' U B 968 61.221 59.892 110.015 1.00 46.51 C
ATOM 12 O2' U B 968 59.900 59.391 110.103 1.00 43.21 O
ATOM 13 C1' U B 968 61.664 60.439 111.369 1.00 46.96 C
ATOM 14 N1 U B 968 61.314 61.851 111.594 1.00 49.59 N
ATOM 15 C2 U B 968 60.209 62.143 112.397 1.00 52.00 C
ATOM 16 O2 U B 968 59.509 61.286 112.920 1.00 52.73 O
ATOM 17 N3 U B 968 59.959 63.484 112.569 1.00 52.32 N
ATOM 18 C4 U B 968 60.682 64.540 112.044 1.00 52.01 C
ATOM 19 O4 U B 968 60.339 65.702 112.293 1.00 50.59 O
ATOM 20 C5 U B 968 61.797 64.152 111.233 1.00 51.77 C
ATOM 21 C6 U B 968 62.063 62.858 111.037 1.00 49.68 C
ATOM 22 P C B 969 61.856 56.182 109.867 1.00 51.33 P
ATOM 23 OP1 C B 969 63.261 55.706 109.841 1.00 50.44 O
ATOM 24 OP2 C B 969 61.070 56.198 108.604 1.00 49.58 O
ATOM 25 O5' C B 969 61.033 55.346 110.942 1.00 50.42 O
TER
ATOM 2 P C A 970 57.106 53.530 110.228 1.00 52.98 P
ATOM 3 OP1 C A 970 56.208 52.430 109.803 1.00 53.83 O
ATOM 4 OP2 C A 970 57.698 54.437 109.196 1.00 51.23 O
ATOM 5 O5' C A 970 56.313 54.370 111.331 1.00 50.00 O
ATOM 6 C5' C A 970 55.032 54.955 111.069 1.00 46.07 C
ATOM 7 C4' C A 970 54.456 55.514 112.347 1.00 46.20 C
ATOM 8 O4' C A 970 55.437 56.345 113.018 1.00 47.00 O
ATOM 9 C3' C A 970 53.263 56.429 112.178 1.00 46.05 C
ATOM 10 O3' C A 970 52.070 55.687 112.035 1.00 45.95 O
ATOM 11 C2' C A 970 53.282 57.224 113.473 1.00 46.58 C
ATOM 12 O2' C A 970 52.785 56.488 114.567 1.00 49.29 O
ATOM 13 C1' C A 970 54.782 57.423 113.676 1.00 47.63 C
ATOM 14 N1 C A 970 55.274 58.704 113.121 1.00 49.76 N
ATOM 15 C2 C A 970 54.860 59.911 113.716 1.00 49.74 C
ATOM 16 O2 C A 970 54.090 59.876 114.681 1.00 50.14 O
ATOM 17 N3 C A 970 55.313 61.081 113.221 1.00 50.14 N
ATOM 18 C4 C A 970 56.144 61.087 112.176 1.00 51.30 C
ATOM 19 N4 C A 970 56.568 62.273 111.720 1.00 52.99 N
ATOM 20 C5 C A 970 56.579 59.881 111.550 1.00 50.43 C
ATOM 21 C6 C A 970 56.125 58.726 112.047 1.00 50.37 C
ATOM 22 P A A 971 51.100 55.984 110.797 1.00 45.77 P
ATOM 23 OP1 A A 971 49.903 55.098 110.944 1.00 42.69 O
ATOM 24 OP2 A A 971 51.929 55.910 109.564 1.00 42.12 O
ATOM 25 O5' A A 971 50.678 57.505 111.020 1.00 45.61 O
TER
ATOM 1 O3' C B 967 65.814 62.804 108.339 1.00 40.61 O
ATOM 2 P U B 968 64.586 61.986 107.664 1.00 42.48 P
ATOM 3 OP1 U B 968 65.160 60.988 106.731 1.00 37.36 O
ATOM 4 OP2 U B 968 63.601 62.974 107.157 1.00 43.47 O
ATOM 5 O5' U B 968 63.876 61.205 108.859 1.00 41.86 O
ATOM 6 C5' U B 968 64.481 60.045 109.455 1.00 44.42 C
ATOM 7 C4' U B 968 63.514 59.364 110.399 1.00 45.51 C
ATOM 8 O4' U B 968 63.073 60.323 111.396 1.00 46.48 O
ATOM 9 C3' U B 968 62.244 58.782 109.786 1.00 46.94 C
ATOM 10 O3' U B 968 61.859 57.641 110.540 1.00 48.85 O
ATOM 11 C2' U B 968 61.221 59.892 110.015 1.00 46.51 C
ATOM 12 O2' U B 968 59.900 59.391 110.103 1.00 43.21 O
ATOM 13 C1' U B 968 61.664 60.439 111.369 1.00 46.96 C
ATOM 14 N1 U B 968 61.314 61.851 111.594 1.00 49.59 N
ATOM 15 C2 U B 968 60.209 62.143 112.397 1.00 52.00 C
ATOM 16 O2 U B 968 59.509 61.286 112.920 1.00 52.73 O
ATOM 17 N3 U B 968 59.959 63.484 112.569 1.00 52.32 N
ATOM 18 C4 U B 968 60.682 64.540 112.044 1.00 52.01 C
ATOM 19 O4 U B 968 60.339 65.702 112.293 1.00 50.59 O
ATOM 20 C5 U B 968 61.797 64.152 111.233 1.00 51.77 C
ATOM 21 C6 U B 968 62.063 62.858 111.037 1.00 49.68 C
ATOM 22 P C B 969 61.856 56.182 109.867 1.00 51.33 P
ATOM 23 OP1 C B 969 63.261 55.706 109.841 1.00 50.44 O
ATOM 24 OP2 C B 969 61.070 56.198 108.604 1.00 49.58 O
ATOM 25 O5' C B 969 61.033 55.346 110.942 1.00 50.42 O
TER
Atoms:
C2: (54.860,59.911,113.716)
OP1: (56.208,52.430,109.803)
OP2: (57.698,54.437,109.196)
C4: (56.144,61.087,112.176)
O5': (56.313,54.370,111.331)
C3': (53.263,56.429,112.178)
C1': (54.782,57.423,113.676)
O4': (55.437,56.345,113.018)
C5': (55.032,54.955,111.069)
P: (57.106,53.530,110.228)
O2: (54.090,59.876,114.681)
C4': (54.456,55.514,112.347)
C2': (53.282,57.224,113.473)
O2': (52.785,56.488,114.567)
N1: (55.274,58.704,113.121)
N3: (55.313,61.081,113.221)
N4: (56.568,62.273,111.720)
C6: (56.125,58.726,112.047)
C5: (56.579,59.881,111.550)
O3': (52.070,55.687,112.035)
OP1: (56.208,52.430,109.803)
OP2: (57.698,54.437,109.196)
C4: (56.144,61.087,112.176)
O5': (56.313,54.370,111.331)
C3': (53.263,56.429,112.178)
C1': (54.782,57.423,113.676)
O4': (55.437,56.345,113.018)
C5': (55.032,54.955,111.069)
P: (57.106,53.530,110.228)
O2: (54.090,59.876,114.681)
C4': (54.456,55.514,112.347)
C2': (53.282,57.224,113.473)
O2': (52.785,56.488,114.567)
N1: (55.274,58.704,113.121)
N3: (55.313,61.081,113.221)
N4: (56.568,62.273,111.720)
C6: (56.125,58.726,112.047)
C5: (56.579,59.881,111.550)
O3': (52.070,55.687,112.035)
C4: (60.682,64.540,112.044)
N3: (59.959,63.484,112.569)
OP1: (65.160,60.988,106.731)
OP2: (63.601,62.974,107.157)
C2: (60.209,62.143,112.397)
C1': (61.664,60.439,111.369)
C3': (62.244,58.782,109.786)
O5': (63.876,61.205,108.859)
O4': (63.073,60.323,111.396)
C5': (64.481,60.045,109.455)
P: (64.586,61.986,107.664)
C4': (63.514,59.364,110.399)
C2': (61.221,59.892,110.015)
O2': (59.900,59.391,110.103)
N1: (61.314,61.851,111.594)
O4: (60.339,65.702,112.293)
O2: (59.509,61.286,112.920)
C6: (62.063,62.858,111.037)
C5: (61.797,64.152,111.233)
O3': (61.859,57.641,110.540)
N3: (59.959,63.484,112.569)
OP1: (65.160,60.988,106.731)
OP2: (63.601,62.974,107.157)
C2: (60.209,62.143,112.397)
C1': (61.664,60.439,111.369)
C3': (62.244,58.782,109.786)
O5': (63.876,61.205,108.859)
O4': (63.073,60.323,111.396)
C5': (64.481,60.045,109.455)
P: (64.586,61.986,107.664)
C4': (63.514,59.364,110.399)
C2': (61.221,59.892,110.015)
O2': (59.900,59.391,110.103)
N1: (61.314,61.851,111.594)
O4: (60.339,65.702,112.293)
O2: (59.509,61.286,112.920)
C6: (62.063,62.858,111.037)
C5: (61.797,64.152,111.233)
O3': (61.859,57.641,110.540)
Image (generated by PyMOL):