Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0970:0968
Extra
PDB:
ATOM 1 O3' C A 969 57.762 52.590 110.835 1.00 45.03 O
ATOM 2 P C A 970 56.497 53.157 110.030 1.00 43.60 P
ATOM 3 OP1 C A 970 55.626 52.009 109.687 1.00 44.70 O
ATOM 4 OP2 C A 970 57.006 54.047 108.951 1.00 43.33 O
ATOM 5 O5' C A 970 55.748 54.027 111.135 1.00 40.56 O
ATOM 6 C5' C A 970 54.552 54.749 110.843 1.00 38.60 C
ATOM 7 C4' C A 970 54.017 55.369 112.107 1.00 39.41 C
ATOM 8 O4' C A 970 55.034 56.199 112.727 1.00 40.66 O
ATOM 9 C3' C A 970 52.844 56.306 111.925 1.00 39.13 C
ATOM 10 O3' C A 970 51.641 55.579 111.832 1.00 38.65 O
ATOM 11 C2' C A 970 52.906 57.143 113.192 1.00 40.84 C
ATOM 12 O2' C A 970 52.388 56.470 114.325 1.00 42.38 O
ATOM 13 C1' C A 970 54.418 57.315 113.357 1.00 41.84 C
ATOM 14 N1 C A 970 54.937 58.563 112.750 1.00 44.02 N
ATOM 15 C2 C A 970 54.466 59.802 113.229 1.00 45.34 C
ATOM 16 O2 C A 970 53.606 59.819 114.121 1.00 46.39 O
ATOM 17 N3 C A 970 54.955 60.946 112.702 1.00 46.39 N
ATOM 18 C4 C A 970 55.869 60.896 111.731 1.00 47.10 C
ATOM 19 N4 C A 970 56.331 62.058 111.251 1.00 47.60 N
ATOM 20 C5 C A 970 56.352 59.656 111.211 1.00 46.23 C
ATOM 21 C6 C A 970 55.865 58.527 111.744 1.00 44.53 C
ATOM 22 P A A 971 50.762 55.684 110.503 1.00 38.60 P
ATOM 23 OP1 A A 971 49.602 54.774 110.674 1.00 40.63 O
ATOM 24 OP2 A A 971 51.673 55.501 109.351 1.00 38.67 O
ATOM 25 O5' A A 971 50.220 57.179 110.528 1.00 39.36 O
TER
ATOM 1 O3' C B 967 65.446 62.412 107.999 1.00 36.04 O
ATOM 2 P U B 968 64.210 61.626 107.316 1.00 37.62 P
ATOM 3 OP1 U B 968 64.761 60.645 106.345 1.00 36.78 O
ATOM 4 OP2 U B 968 63.211 62.627 106.865 1.00 38.61 O
ATOM 5 O5' U B 968 63.515 60.815 108.493 1.00 38.38 O
ATOM 6 C5' U B 968 64.128 59.650 109.066 1.00 39.11 C
ATOM 7 C4' U B 968 63.167 58.979 110.019 1.00 40.76 C
ATOM 8 O4' U B 968 62.721 59.959 111.000 1.00 40.03 O
ATOM 9 C3' U B 968 61.898 58.405 109.391 1.00 40.93 C
ATOM 10 O3' U B 968 61.473 57.287 110.152 1.00 43.29 O
ATOM 11 C2' U B 968 60.891 59.531 109.586 1.00 41.09 C
ATOM 12 O2' U B 968 59.560 59.067 109.650 1.00 39.70 O
ATOM 13 C1' U B 968 61.313 60.080 110.945 1.00 41.02 C
ATOM 14 N1 U B 968 60.958 61.491 111.143 1.00 42.29 N
ATOM 15 C2 U B 968 59.897 61.777 111.979 1.00 43.76 C
ATOM 16 O2 U B 968 59.220 60.917 112.511 1.00 43.91 O
ATOM 17 N3 U B 968 59.649 63.114 112.161 1.00 45.17 N
ATOM 18 C4 U B 968 60.326 64.170 111.587 1.00 45.38 C
ATOM 19 O4 U B 968 59.988 65.324 111.852 1.00 46.28 O
ATOM 20 C5 U B 968 61.390 63.790 110.714 1.00 45.40 C
ATOM 21 C6 U B 968 61.664 62.496 110.528 1.00 43.68 C
ATOM 22 P C B 969 61.430 55.832 109.486 1.00 45.61 P
ATOM 23 OP1 C B 969 62.800 55.278 109.551 1.00 45.43 O
ATOM 24 OP2 C B 969 60.741 55.915 108.174 1.00 44.84 O
ATOM 25 O5' C B 969 60.507 55.016 110.494 1.00 45.83 O
TER
ATOM 2 P C A 970 56.497 53.157 110.030 1.00 43.60 P
ATOM 3 OP1 C A 970 55.626 52.009 109.687 1.00 44.70 O
ATOM 4 OP2 C A 970 57.006 54.047 108.951 1.00 43.33 O
ATOM 5 O5' C A 970 55.748 54.027 111.135 1.00 40.56 O
ATOM 6 C5' C A 970 54.552 54.749 110.843 1.00 38.60 C
ATOM 7 C4' C A 970 54.017 55.369 112.107 1.00 39.41 C
ATOM 8 O4' C A 970 55.034 56.199 112.727 1.00 40.66 O
ATOM 9 C3' C A 970 52.844 56.306 111.925 1.00 39.13 C
ATOM 10 O3' C A 970 51.641 55.579 111.832 1.00 38.65 O
ATOM 11 C2' C A 970 52.906 57.143 113.192 1.00 40.84 C
ATOM 12 O2' C A 970 52.388 56.470 114.325 1.00 42.38 O
ATOM 13 C1' C A 970 54.418 57.315 113.357 1.00 41.84 C
ATOM 14 N1 C A 970 54.937 58.563 112.750 1.00 44.02 N
ATOM 15 C2 C A 970 54.466 59.802 113.229 1.00 45.34 C
ATOM 16 O2 C A 970 53.606 59.819 114.121 1.00 46.39 O
ATOM 17 N3 C A 970 54.955 60.946 112.702 1.00 46.39 N
ATOM 18 C4 C A 970 55.869 60.896 111.731 1.00 47.10 C
ATOM 19 N4 C A 970 56.331 62.058 111.251 1.00 47.60 N
ATOM 20 C5 C A 970 56.352 59.656 111.211 1.00 46.23 C
ATOM 21 C6 C A 970 55.865 58.527 111.744 1.00 44.53 C
ATOM 22 P A A 971 50.762 55.684 110.503 1.00 38.60 P
ATOM 23 OP1 A A 971 49.602 54.774 110.674 1.00 40.63 O
ATOM 24 OP2 A A 971 51.673 55.501 109.351 1.00 38.67 O
ATOM 25 O5' A A 971 50.220 57.179 110.528 1.00 39.36 O
TER
ATOM 1 O3' C B 967 65.446 62.412 107.999 1.00 36.04 O
ATOM 2 P U B 968 64.210 61.626 107.316 1.00 37.62 P
ATOM 3 OP1 U B 968 64.761 60.645 106.345 1.00 36.78 O
ATOM 4 OP2 U B 968 63.211 62.627 106.865 1.00 38.61 O
ATOM 5 O5' U B 968 63.515 60.815 108.493 1.00 38.38 O
ATOM 6 C5' U B 968 64.128 59.650 109.066 1.00 39.11 C
ATOM 7 C4' U B 968 63.167 58.979 110.019 1.00 40.76 C
ATOM 8 O4' U B 968 62.721 59.959 111.000 1.00 40.03 O
ATOM 9 C3' U B 968 61.898 58.405 109.391 1.00 40.93 C
ATOM 10 O3' U B 968 61.473 57.287 110.152 1.00 43.29 O
ATOM 11 C2' U B 968 60.891 59.531 109.586 1.00 41.09 C
ATOM 12 O2' U B 968 59.560 59.067 109.650 1.00 39.70 O
ATOM 13 C1' U B 968 61.313 60.080 110.945 1.00 41.02 C
ATOM 14 N1 U B 968 60.958 61.491 111.143 1.00 42.29 N
ATOM 15 C2 U B 968 59.897 61.777 111.979 1.00 43.76 C
ATOM 16 O2 U B 968 59.220 60.917 112.511 1.00 43.91 O
ATOM 17 N3 U B 968 59.649 63.114 112.161 1.00 45.17 N
ATOM 18 C4 U B 968 60.326 64.170 111.587 1.00 45.38 C
ATOM 19 O4 U B 968 59.988 65.324 111.852 1.00 46.28 O
ATOM 20 C5 U B 968 61.390 63.790 110.714 1.00 45.40 C
ATOM 21 C6 U B 968 61.664 62.496 110.528 1.00 43.68 C
ATOM 22 P C B 969 61.430 55.832 109.486 1.00 45.61 P
ATOM 23 OP1 C B 969 62.800 55.278 109.551 1.00 45.43 O
ATOM 24 OP2 C B 969 60.741 55.915 108.174 1.00 44.84 O
ATOM 25 O5' C B 969 60.507 55.016 110.494 1.00 45.83 O
TER
Atoms:
C2: (54.466,59.802,113.229)
OP1: (55.626,52.009,109.687)
OP2: (57.006,54.047,108.951)
C4: (55.869,60.896,111.731)
O5': (55.748,54.027,111.135)
C3': (52.844,56.306,111.925)
C1': (54.418,57.315,113.357)
O4': (55.034,56.199,112.727)
C5': (54.552,54.749,110.843)
P: (56.497,53.157,110.030)
O2: (53.606,59.819,114.121)
C4': (54.017,55.369,112.107)
C2': (52.906,57.143,113.192)
O2': (52.388,56.470,114.325)
N1: (54.937,58.563,112.750)
N3: (54.955,60.946,112.702)
N4: (56.331,62.058,111.251)
C6: (55.865,58.527,111.744)
C5: (56.352,59.656,111.211)
O3': (51.641,55.579,111.832)
OP1: (55.626,52.009,109.687)
OP2: (57.006,54.047,108.951)
C4: (55.869,60.896,111.731)
O5': (55.748,54.027,111.135)
C3': (52.844,56.306,111.925)
C1': (54.418,57.315,113.357)
O4': (55.034,56.199,112.727)
C5': (54.552,54.749,110.843)
P: (56.497,53.157,110.030)
O2: (53.606,59.819,114.121)
C4': (54.017,55.369,112.107)
C2': (52.906,57.143,113.192)
O2': (52.388,56.470,114.325)
N1: (54.937,58.563,112.750)
N3: (54.955,60.946,112.702)
N4: (56.331,62.058,111.251)
C6: (55.865,58.527,111.744)
C5: (56.352,59.656,111.211)
O3': (51.641,55.579,111.832)
C4: (60.326,64.170,111.587)
N3: (59.649,63.114,112.161)
OP1: (64.761,60.645,106.345)
OP2: (63.211,62.627,106.865)
C2: (59.897,61.777,111.979)
C1': (61.313,60.080,110.945)
C3': (61.898,58.405,109.391)
O5': (63.515,60.815,108.493)
O4': (62.721,59.959,111.000)
C5': (64.128,59.650,109.066)
P: (64.210,61.626,107.316)
C4': (63.167,58.979,110.019)
C2': (60.891,59.531,109.586)
O2': (59.560,59.067,109.650)
N1: (60.958,61.491,111.143)
O4: (59.988,65.324,111.852)
O2: (59.220,60.917,112.511)
C6: (61.664,62.496,110.528)
C5: (61.390,63.790,110.714)
O3': (61.473,57.287,110.152)
N3: (59.649,63.114,112.161)
OP1: (64.761,60.645,106.345)
OP2: (63.211,62.627,106.865)
C2: (59.897,61.777,111.979)
C1': (61.313,60.080,110.945)
C3': (61.898,58.405,109.391)
O5': (63.515,60.815,108.493)
O4': (62.721,59.959,111.000)
C5': (64.128,59.650,109.066)
P: (64.210,61.626,107.316)
C4': (63.167,58.979,110.019)
C2': (60.891,59.531,109.586)
O2': (59.560,59.067,109.650)
N1: (60.958,61.491,111.143)
O4: (59.988,65.324,111.852)
O2: (59.220,60.917,112.511)
C6: (61.664,62.496,110.528)
C5: (61.390,63.790,110.714)
O3': (61.473,57.287,110.152)
Image (generated by PyMOL):