Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2RFK:E6:E5
Extra
PDB:
ATOM 1 O3' U A 5 -10.342 41.724 81.257 1.00 40.46 O
ATOM 2 P C A 6 -11.756 41.405 81.919 1.00 40.28 P
ATOM 3 OP1 C A 6 -12.892 41.907 81.118 1.00 39.47 O
ATOM 4 OP2 C A 6 -11.632 41.856 83.316 1.00 41.63 O
ATOM 5 O5' C A 6 -11.715 39.804 81.845 1.00 39.85 O
ATOM 6 C5' C A 6 -12.852 39.026 81.501 1.00 40.89 C
ATOM 7 C4' C A 6 -12.531 37.542 81.569 1.00 41.54 C
ATOM 8 O4' C A 6 -11.561 37.209 80.547 1.00 41.47 O
ATOM 9 C3' C A 6 -11.843 37.104 82.852 1.00 42.87 C
ATOM 10 O3' C A 6 -12.788 36.738 83.822 1.00 44.60 O
ATOM 11 C2' C A 6 -11.028 35.887 82.415 1.00 42.19 C
ATOM 12 O2' C A 6 -11.760 34.681 82.334 1.00 40.03 O
ATOM 13 C1' C A 6 -10.573 36.318 81.042 1.00 40.62 C
ATOM 14 N1 C A 6 -9.223 36.956 81.078 1.00 39.44 N
ATOM 15 C2 C A 6 -8.109 36.139 80.890 1.00 38.85 C
ATOM 16 O2 C A 6 -8.279 34.936 80.709 1.00 39.46 O
ATOM 17 N3 C A 6 -6.876 36.680 80.899 1.00 39.19 N
ATOM 18 C4 C A 6 -6.751 37.993 81.091 1.00 40.41 C
ATOM 19 N4 C A 6 -5.514 38.514 81.101 1.00 40.92 N
ATOM 20 C5 C A 6 -7.879 38.847 81.292 1.00 39.66 C
ATOM 21 C6 C A 6 -9.088 38.294 81.281 1.00 38.47 C
ATOM 22 P G A 7 -12.350 36.825 85.351 1.00 44.87 P
ATOM 23 OP1 G A 7 -13.531 36.372 86.117 1.00 45.06 O
ATOM 24 OP2 G A 7 -11.740 38.164 85.553 1.00 45.29 O
ATOM 25 O5' G A 7 -11.214 35.713 85.553 1.00 44.27 O
TER
ATOM 1 O3' U B 4 -9.109 46.142 77.490 1.00 43.83 O
ATOM 2 P U B 5 -10.100 46.585 78.678 1.00 43.39 P
ATOM 3 OP1 U B 5 -11.221 47.350 78.094 1.00 44.12 O
ATOM 4 OP2 U B 5 -9.262 47.245 79.681 1.00 45.04 O
ATOM 5 O5' U B 5 -10.682 45.273 79.378 1.00 41.87 O
ATOM 6 C5' U B 5 -11.153 44.184 78.648 1.00 41.15 C
ATOM 7 C4' U B 5 -10.484 42.911 79.137 1.00 41.46 C
ATOM 8 O4' U B 5 -9.346 42.597 78.290 1.00 41.30 O
ATOM 9 C3' U B 5 -9.999 42.916 80.591 1.00 41.06 C
ATOM 10 O3' U B 5 -10.342 41.724 81.257 1.00 40.46 O
ATOM 11 C2' U B 5 -8.487 42.926 80.450 1.00 41.38 C
ATOM 12 O2' U B 5 -7.854 42.130 81.426 1.00 41.97 O
ATOM 13 C1' U B 5 -8.268 42.241 79.118 1.00 41.72 C
ATOM 14 N1 U B 5 -7.004 42.700 78.535 1.00 41.93 N
ATOM 15 C2 U B 5 -6.006 41.773 78.306 1.00 41.99 C
ATOM 16 O2 U B 5 -6.124 40.587 78.550 1.00 43.00 O
ATOM 17 N3 U B 5 -4.850 42.278 77.770 1.00 41.11 N
ATOM 18 C4 U B 5 -4.609 43.602 77.449 1.00 41.83 C
ATOM 19 O4 U B 5 -3.521 43.928 76.973 1.00 42.41 O
ATOM 20 C5 U B 5 -5.706 44.504 77.722 1.00 42.27 C
ATOM 21 C6 U B 5 -6.844 44.037 78.250 1.00 41.04 C
ATOM 22 P C B 6 -11.756 41.405 81.919 1.00 40.28 P
ATOM 23 OP1 C B 6 -12.892 41.907 81.118 1.00 39.47 O
ATOM 24 OP2 C B 6 -11.632 41.856 83.316 1.00 41.63 O
ATOM 25 O5' C B 6 -11.715 39.804 81.845 1.00 39.85 O
TER
ATOM 2 P C A 6 -11.756 41.405 81.919 1.00 40.28 P
ATOM 3 OP1 C A 6 -12.892 41.907 81.118 1.00 39.47 O
ATOM 4 OP2 C A 6 -11.632 41.856 83.316 1.00 41.63 O
ATOM 5 O5' C A 6 -11.715 39.804 81.845 1.00 39.85 O
ATOM 6 C5' C A 6 -12.852 39.026 81.501 1.00 40.89 C
ATOM 7 C4' C A 6 -12.531 37.542 81.569 1.00 41.54 C
ATOM 8 O4' C A 6 -11.561 37.209 80.547 1.00 41.47 O
ATOM 9 C3' C A 6 -11.843 37.104 82.852 1.00 42.87 C
ATOM 10 O3' C A 6 -12.788 36.738 83.822 1.00 44.60 O
ATOM 11 C2' C A 6 -11.028 35.887 82.415 1.00 42.19 C
ATOM 12 O2' C A 6 -11.760 34.681 82.334 1.00 40.03 O
ATOM 13 C1' C A 6 -10.573 36.318 81.042 1.00 40.62 C
ATOM 14 N1 C A 6 -9.223 36.956 81.078 1.00 39.44 N
ATOM 15 C2 C A 6 -8.109 36.139 80.890 1.00 38.85 C
ATOM 16 O2 C A 6 -8.279 34.936 80.709 1.00 39.46 O
ATOM 17 N3 C A 6 -6.876 36.680 80.899 1.00 39.19 N
ATOM 18 C4 C A 6 -6.751 37.993 81.091 1.00 40.41 C
ATOM 19 N4 C A 6 -5.514 38.514 81.101 1.00 40.92 N
ATOM 20 C5 C A 6 -7.879 38.847 81.292 1.00 39.66 C
ATOM 21 C6 C A 6 -9.088 38.294 81.281 1.00 38.47 C
ATOM 22 P G A 7 -12.350 36.825 85.351 1.00 44.87 P
ATOM 23 OP1 G A 7 -13.531 36.372 86.117 1.00 45.06 O
ATOM 24 OP2 G A 7 -11.740 38.164 85.553 1.00 45.29 O
ATOM 25 O5' G A 7 -11.214 35.713 85.553 1.00 44.27 O
TER
ATOM 1 O3' U B 4 -9.109 46.142 77.490 1.00 43.83 O
ATOM 2 P U B 5 -10.100 46.585 78.678 1.00 43.39 P
ATOM 3 OP1 U B 5 -11.221 47.350 78.094 1.00 44.12 O
ATOM 4 OP2 U B 5 -9.262 47.245 79.681 1.00 45.04 O
ATOM 5 O5' U B 5 -10.682 45.273 79.378 1.00 41.87 O
ATOM 6 C5' U B 5 -11.153 44.184 78.648 1.00 41.15 C
ATOM 7 C4' U B 5 -10.484 42.911 79.137 1.00 41.46 C
ATOM 8 O4' U B 5 -9.346 42.597 78.290 1.00 41.30 O
ATOM 9 C3' U B 5 -9.999 42.916 80.591 1.00 41.06 C
ATOM 10 O3' U B 5 -10.342 41.724 81.257 1.00 40.46 O
ATOM 11 C2' U B 5 -8.487 42.926 80.450 1.00 41.38 C
ATOM 12 O2' U B 5 -7.854 42.130 81.426 1.00 41.97 O
ATOM 13 C1' U B 5 -8.268 42.241 79.118 1.00 41.72 C
ATOM 14 N1 U B 5 -7.004 42.700 78.535 1.00 41.93 N
ATOM 15 C2 U B 5 -6.006 41.773 78.306 1.00 41.99 C
ATOM 16 O2 U B 5 -6.124 40.587 78.550 1.00 43.00 O
ATOM 17 N3 U B 5 -4.850 42.278 77.770 1.00 41.11 N
ATOM 18 C4 U B 5 -4.609 43.602 77.449 1.00 41.83 C
ATOM 19 O4 U B 5 -3.521 43.928 76.973 1.00 42.41 O
ATOM 20 C5 U B 5 -5.706 44.504 77.722 1.00 42.27 C
ATOM 21 C6 U B 5 -6.844 44.037 78.250 1.00 41.04 C
ATOM 22 P C B 6 -11.756 41.405 81.919 1.00 40.28 P
ATOM 23 OP1 C B 6 -12.892 41.907 81.118 1.00 39.47 O
ATOM 24 OP2 C B 6 -11.632 41.856 83.316 1.00 41.63 O
ATOM 25 O5' C B 6 -11.715 39.804 81.845 1.00 39.85 O
TER
Atoms:
C2: (-8.109,36.139,80.890)
OP1: (-12.892,41.907,81.118)
OP2: (-11.632,41.856,83.316)
C4: (-6.751,37.993,81.091)
O5': (-11.715,39.804,81.845)
C3': (-11.843,37.104,82.852)
C1': (-10.573,36.318,81.042)
O4': (-11.561,37.209,80.547)
C5': (-12.852,39.026,81.501)
P: (-11.756,41.405,81.919)
O2: (-8.279,34.936,80.709)
C4': (-12.531,37.542,81.569)
C2': (-11.028,35.887,82.415)
O2': (-11.760,34.681,82.334)
N1: (-9.223,36.956,81.078)
N3: (-6.876,36.680,80.899)
N4: (-5.514,38.514,81.101)
C6: (-9.088,38.294,81.281)
C5: (-7.879,38.847,81.292)
O3': (-12.788,36.738,83.822)
OP1: (-12.892,41.907,81.118)
OP2: (-11.632,41.856,83.316)
C4: (-6.751,37.993,81.091)
O5': (-11.715,39.804,81.845)
C3': (-11.843,37.104,82.852)
C1': (-10.573,36.318,81.042)
O4': (-11.561,37.209,80.547)
C5': (-12.852,39.026,81.501)
P: (-11.756,41.405,81.919)
O2: (-8.279,34.936,80.709)
C4': (-12.531,37.542,81.569)
C2': (-11.028,35.887,82.415)
O2': (-11.760,34.681,82.334)
N1: (-9.223,36.956,81.078)
N3: (-6.876,36.680,80.899)
N4: (-5.514,38.514,81.101)
C6: (-9.088,38.294,81.281)
C5: (-7.879,38.847,81.292)
O3': (-12.788,36.738,83.822)
C4: (-4.609,43.602,77.449)
N3: (-4.850,42.278,77.770)
OP1: (-11.221,47.350,78.094)
OP2: (-9.262,47.245,79.681)
C2: (-6.006,41.773,78.306)
C1': (-8.268,42.241,79.118)
C3': (-9.999,42.916,80.591)
O5': (-10.682,45.273,79.378)
O4': (-9.346,42.597,78.290)
C5': (-11.153,44.184,78.648)
P: (-10.100,46.585,78.678)
C4': (-10.484,42.911,79.137)
C2': (-8.487,42.926,80.450)
O2': (-7.854,42.130,81.426)
N1: (-7.004,42.700,78.535)
O4: (-3.521,43.928,76.973)
O2: (-6.124,40.587,78.550)
C6: (-6.844,44.037,78.250)
C5: (-5.706,44.504,77.722)
O3': (-10.342,41.724,81.257)
N3: (-4.850,42.278,77.770)
OP1: (-11.221,47.350,78.094)
OP2: (-9.262,47.245,79.681)
C2: (-6.006,41.773,78.306)
C1': (-8.268,42.241,79.118)
C3': (-9.999,42.916,80.591)
O5': (-10.682,45.273,79.378)
O4': (-9.346,42.597,78.290)
C5': (-11.153,44.184,78.648)
P: (-10.100,46.585,78.678)
C4': (-10.484,42.911,79.137)
C2': (-8.487,42.926,80.450)
O2': (-7.854,42.130,81.426)
N1: (-7.004,42.700,78.535)
O4: (-3.521,43.928,76.973)
O2: (-6.124,40.587,78.550)
C6: (-6.844,44.037,78.250)
C5: (-5.706,44.504,77.722)
O3': (-10.342,41.724,81.257)
Image (generated by PyMOL):