Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A540:A856
Extra
PDB:
ATOM 1 O3' U A 539 155.318 100.247 -12.428 1.00 55.34 O
ATOM 2 P C A 540 154.080 99.284 -12.126 1.00 55.91 P
ATOM 3 OP1 C A 540 153.641 99.605 -10.727 1.00 58.58 O
ATOM 4 OP2 C A 540 154.434 97.897 -12.502 1.00 54.57 O
ATOM 5 O5' C A 540 152.941 99.814 -13.065 1.00 55.89 O
ATOM 6 C5' C A 540 153.206 100.180 -14.411 1.00 55.39 C
ATOM 7 C4' C A 540 152.120 99.656 -15.303 1.00 56.08 C
ATOM 8 O4' C A 540 152.790 99.190 -16.491 1.00 57.63 O
ATOM 9 C3' C A 540 151.333 98.468 -14.743 1.00 56.52 C
ATOM 10 O3' C A 540 149.952 98.432 -15.223 1.00 55.85 O
ATOM 11 C2' C A 540 152.068 97.277 -15.334 1.00 57.74 C
ATOM 12 O2' C A 540 151.200 96.186 -15.544 1.00 60.82 O
ATOM 13 C1' C A 540 152.529 97.827 -16.680 1.00 58.27 C
ATOM 14 N1 C A 540 153.745 97.195 -17.206 1.00 60.09 N
ATOM 15 C2 C A 540 153.683 96.570 -18.456 1.00 62.00 C
ATOM 16 O2 C A 540 152.614 96.594 -19.083 1.00 62.98 O
ATOM 17 N3 C A 540 154.789 95.960 -18.949 1.00 62.79 N
ATOM 18 C4 C A 540 155.925 95.973 -18.245 1.00 62.52 C
ATOM 19 N4 C A 540 156.989 95.368 -18.767 1.00 62.71 N
ATOM 20 C5 C A 540 156.019 96.612 -16.973 1.00 62.67 C
ATOM 21 C6 C A 540 154.916 97.207 -16.497 1.00 61.56 C
ATOM 22 P A A 541 148.775 99.180 -14.402 1.00 54.53 P
ATOM 23 OP1 A A 541 149.147 99.271 -12.942 1.00 52.11 O
ATOM 24 OP2 A A 541 147.485 98.575 -14.782 1.00 50.49 O
ATOM 25 O5' A A 541 148.857 100.653 -14.995 1.00 53.53 O
TER
ATOM 1 O3' C B 855 162.623 98.160 -22.860 1.00 52.90 O
ATOM 2 P U B 856 162.548 96.863 -21.930 1.00 55.17 P
ATOM 3 OP1 U B 856 163.960 96.432 -21.682 1.00 54.29 O
ATOM 4 OP2 U B 856 161.537 95.935 -22.515 1.00 53.71 O
ATOM 5 O5' U B 856 162.000 97.441 -20.602 1.00 55.28 O
ATOM 6 C5' U B 856 162.713 98.462 -19.938 1.00 54.86 C
ATOM 7 C4' U B 856 162.069 98.739 -18.631 1.00 55.48 C
ATOM 8 O4' U B 856 160.804 99.416 -18.868 1.00 55.99 O
ATOM 9 C3' U B 856 161.774 97.504 -17.791 1.00 54.94 C
ATOM 10 O3' U B 856 162.102 97.794 -16.459 1.00 56.53 O
ATOM 11 C2' U B 856 160.260 97.331 -17.945 1.00 55.41 C
ATOM 12 O2' U B 856 159.645 96.764 -16.805 1.00 54.42 O
ATOM 13 C1' U B 856 159.793 98.778 -18.126 1.00 56.26 C
ATOM 14 N1 U B 856 158.493 98.990 -18.793 1.00 57.33 N
ATOM 15 C2 U B 856 157.695 100.044 -18.347 1.00 57.48 C
ATOM 16 O2 U B 856 158.052 100.844 -17.501 1.00 58.49 O
ATOM 17 N3 U B 856 156.465 100.134 -18.944 1.00 57.68 N
ATOM 18 C4 U B 856 155.962 99.325 -19.937 1.00 58.13 C
ATOM 19 O4 U B 856 154.796 99.477 -20.312 1.00 58.80 O
ATOM 20 C5 U B 856 156.855 98.305 -20.378 1.00 57.81 C
ATOM 21 C6 U B 856 158.057 98.172 -19.806 1.00 57.65 C
ATOM 22 P G B 857 163.039 96.791 -15.618 1.00 58.07 P
ATOM 23 OP1 G B 857 162.963 95.437 -16.255 1.00 57.17 O
ATOM 24 OP2 G B 857 162.652 96.964 -14.184 1.00 60.39 O
ATOM 25 O5' G B 857 164.491 97.361 -15.802 1.00 53.83 O
TER
ATOM 2 P C A 540 154.080 99.284 -12.126 1.00 55.91 P
ATOM 3 OP1 C A 540 153.641 99.605 -10.727 1.00 58.58 O
ATOM 4 OP2 C A 540 154.434 97.897 -12.502 1.00 54.57 O
ATOM 5 O5' C A 540 152.941 99.814 -13.065 1.00 55.89 O
ATOM 6 C5' C A 540 153.206 100.180 -14.411 1.00 55.39 C
ATOM 7 C4' C A 540 152.120 99.656 -15.303 1.00 56.08 C
ATOM 8 O4' C A 540 152.790 99.190 -16.491 1.00 57.63 O
ATOM 9 C3' C A 540 151.333 98.468 -14.743 1.00 56.52 C
ATOM 10 O3' C A 540 149.952 98.432 -15.223 1.00 55.85 O
ATOM 11 C2' C A 540 152.068 97.277 -15.334 1.00 57.74 C
ATOM 12 O2' C A 540 151.200 96.186 -15.544 1.00 60.82 O
ATOM 13 C1' C A 540 152.529 97.827 -16.680 1.00 58.27 C
ATOM 14 N1 C A 540 153.745 97.195 -17.206 1.00 60.09 N
ATOM 15 C2 C A 540 153.683 96.570 -18.456 1.00 62.00 C
ATOM 16 O2 C A 540 152.614 96.594 -19.083 1.00 62.98 O
ATOM 17 N3 C A 540 154.789 95.960 -18.949 1.00 62.79 N
ATOM 18 C4 C A 540 155.925 95.973 -18.245 1.00 62.52 C
ATOM 19 N4 C A 540 156.989 95.368 -18.767 1.00 62.71 N
ATOM 20 C5 C A 540 156.019 96.612 -16.973 1.00 62.67 C
ATOM 21 C6 C A 540 154.916 97.207 -16.497 1.00 61.56 C
ATOM 22 P A A 541 148.775 99.180 -14.402 1.00 54.53 P
ATOM 23 OP1 A A 541 149.147 99.271 -12.942 1.00 52.11 O
ATOM 24 OP2 A A 541 147.485 98.575 -14.782 1.00 50.49 O
ATOM 25 O5' A A 541 148.857 100.653 -14.995 1.00 53.53 O
TER
ATOM 1 O3' C B 855 162.623 98.160 -22.860 1.00 52.90 O
ATOM 2 P U B 856 162.548 96.863 -21.930 1.00 55.17 P
ATOM 3 OP1 U B 856 163.960 96.432 -21.682 1.00 54.29 O
ATOM 4 OP2 U B 856 161.537 95.935 -22.515 1.00 53.71 O
ATOM 5 O5' U B 856 162.000 97.441 -20.602 1.00 55.28 O
ATOM 6 C5' U B 856 162.713 98.462 -19.938 1.00 54.86 C
ATOM 7 C4' U B 856 162.069 98.739 -18.631 1.00 55.48 C
ATOM 8 O4' U B 856 160.804 99.416 -18.868 1.00 55.99 O
ATOM 9 C3' U B 856 161.774 97.504 -17.791 1.00 54.94 C
ATOM 10 O3' U B 856 162.102 97.794 -16.459 1.00 56.53 O
ATOM 11 C2' U B 856 160.260 97.331 -17.945 1.00 55.41 C
ATOM 12 O2' U B 856 159.645 96.764 -16.805 1.00 54.42 O
ATOM 13 C1' U B 856 159.793 98.778 -18.126 1.00 56.26 C
ATOM 14 N1 U B 856 158.493 98.990 -18.793 1.00 57.33 N
ATOM 15 C2 U B 856 157.695 100.044 -18.347 1.00 57.48 C
ATOM 16 O2 U B 856 158.052 100.844 -17.501 1.00 58.49 O
ATOM 17 N3 U B 856 156.465 100.134 -18.944 1.00 57.68 N
ATOM 18 C4 U B 856 155.962 99.325 -19.937 1.00 58.13 C
ATOM 19 O4 U B 856 154.796 99.477 -20.312 1.00 58.80 O
ATOM 20 C5 U B 856 156.855 98.305 -20.378 1.00 57.81 C
ATOM 21 C6 U B 856 158.057 98.172 -19.806 1.00 57.65 C
ATOM 22 P G B 857 163.039 96.791 -15.618 1.00 58.07 P
ATOM 23 OP1 G B 857 162.963 95.437 -16.255 1.00 57.17 O
ATOM 24 OP2 G B 857 162.652 96.964 -14.184 1.00 60.39 O
ATOM 25 O5' G B 857 164.491 97.361 -15.802 1.00 53.83 O
TER
Atoms:
C2: (153.683,96.570,-18.456)
OP1: (153.641,99.605,-10.727)
OP2: (154.434,97.897,-12.502)
C4: (155.925,95.973,-18.245)
O5': (152.941,99.814,-13.065)
C3': (151.333,98.468,-14.743)
C1': (152.529,97.827,-16.680)
O4': (152.790,99.190,-16.491)
C5': (153.206,100.180,-14.411)
P: (154.080,99.284,-12.126)
O2: (152.614,96.594,-19.083)
C4': (152.120,99.656,-15.303)
C2': (152.068,97.277,-15.334)
O2': (151.200,96.186,-15.544)
N1: (153.745,97.195,-17.206)
N3: (154.789,95.960,-18.949)
N4: (156.989,95.368,-18.767)
C6: (154.916,97.207,-16.497)
C5: (156.019,96.612,-16.973)
O3': (149.952,98.432,-15.223)
OP1: (153.641,99.605,-10.727)
OP2: (154.434,97.897,-12.502)
C4: (155.925,95.973,-18.245)
O5': (152.941,99.814,-13.065)
C3': (151.333,98.468,-14.743)
C1': (152.529,97.827,-16.680)
O4': (152.790,99.190,-16.491)
C5': (153.206,100.180,-14.411)
P: (154.080,99.284,-12.126)
O2: (152.614,96.594,-19.083)
C4': (152.120,99.656,-15.303)
C2': (152.068,97.277,-15.334)
O2': (151.200,96.186,-15.544)
N1: (153.745,97.195,-17.206)
N3: (154.789,95.960,-18.949)
N4: (156.989,95.368,-18.767)
C6: (154.916,97.207,-16.497)
C5: (156.019,96.612,-16.973)
O3': (149.952,98.432,-15.223)
C4: (155.962,99.325,-19.937)
N3: (156.465,100.134,-18.944)
OP1: (163.960,96.432,-21.682)
OP2: (161.537,95.935,-22.515)
C2: (157.695,100.044,-18.347)
C1': (159.793,98.778,-18.126)
C3': (161.774,97.504,-17.791)
O5': (162.000,97.441,-20.602)
O4': (160.804,99.416,-18.868)
C5': (162.713,98.462,-19.938)
P: (162.548,96.863,-21.930)
C4': (162.069,98.739,-18.631)
C2': (160.260,97.331,-17.945)
O2': (159.645,96.764,-16.805)
N1: (158.493,98.990,-18.793)
O4: (154.796,99.477,-20.312)
O2: (158.052,100.844,-17.501)
C6: (158.057,98.172,-19.806)
C5: (156.855,98.305,-20.378)
O3': (162.102,97.794,-16.459)
N3: (156.465,100.134,-18.944)
OP1: (163.960,96.432,-21.682)
OP2: (161.537,95.935,-22.515)
C2: (157.695,100.044,-18.347)
C1': (159.793,98.778,-18.126)
C3': (161.774,97.504,-17.791)
O5': (162.000,97.441,-20.602)
O4': (160.804,99.416,-18.868)
C5': (162.713,98.462,-19.938)
P: (162.548,96.863,-21.930)
C4': (162.069,98.739,-18.631)
C2': (160.260,97.331,-17.945)
O2': (159.645,96.764,-16.805)
N1: (158.493,98.990,-18.793)
O4: (154.796,99.477,-20.312)
O2: (158.052,100.844,-17.501)
C6: (158.057,98.172,-19.806)
C5: (156.855,98.305,-20.378)
O3': (162.102,97.794,-16.459)
Image (generated by PyMOL):