Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:A35:A34
Extra
PDB:
ATOM 1 O3' U A 34 -20.702 -9.603 29.123 1.00 60.61 O
ATOM 2 P C A 35 -19.586 -9.537 30.273 1.00 59.72 P
ATOM 3 OP1 C A 35 -19.890 -10.689 31.168 1.00 64.47 O
ATOM 4 OP2 C A 35 -19.515 -8.144 30.715 1.00 65.65 O
ATOM 5 O5' C A 35 -18.179 -9.927 29.617 1.00 56.71 O
ATOM 6 C5' C A 35 -17.102 -10.338 30.452 1.00 53.01 C
ATOM 7 C4' C A 35 -15.998 -10.724 29.486 1.00 52.07 C
ATOM 8 O4' C A 35 -16.386 -11.972 28.846 1.00 51.35 O
ATOM 9 C3' C A 35 -15.882 -9.757 28.312 1.00 53.46 C
ATOM 10 O3' C A 35 -15.064 -8.589 28.576 1.00 51.57 O
ATOM 11 C2' C A 35 -15.252 -10.642 27.245 1.00 48.54 C
ATOM 12 O2' C A 35 -13.884 -10.868 27.476 1.00 48.59 O
ATOM 13 C1' C A 35 -15.947 -11.962 27.496 1.00 48.94 C
ATOM 14 N1 C A 35 -17.068 -12.222 26.547 1.00 49.68 N
ATOM 15 C2 C A 35 -16.735 -12.506 25.225 1.00 44.34 C
ATOM 16 O2 C A 35 -15.545 -12.514 24.888 1.00 39.39 O
ATOM 17 N3 C A 35 -17.737 -12.754 24.365 1.00 44.69 N
ATOM 18 C4 C A 35 -19.015 -12.730 24.765 1.00 43.11 C
ATOM 19 N4 C A 35 -19.958 -13.011 23.848 1.00 39.86 N
ATOM 20 C5 C A 35 -19.375 -12.456 26.107 1.00 48.58 C
ATOM 21 C6 C A 35 -18.372 -12.208 26.955 1.00 50.35 C
ATOM 22 P C A 36 -15.438 -7.198 27.810 1.00 58.59 P
ATOM 23 OP1 C A 36 -14.643 -6.174 28.545 1.00 54.61 O
ATOM 24 OP2 C A 36 -16.895 -7.034 27.594 1.00 55.63 O
ATOM 25 O5' C A 36 -14.854 -7.335 26.339 1.00 49.80 O
TER
ATOM 1 O3' G B 33 -21.654 -14.004 30.951 1.00 67.44 O
ATOM 2 P U B 34 -23.112 -14.617 30.686 1.00 71.86 P
ATOM 3 OP1 U B 34 -23.831 -14.475 31.987 1.00 72.60 O
ATOM 4 OP2 U B 34 -23.023 -15.950 30.038 1.00 67.70 O
ATOM 5 O5' U B 34 -23.697 -13.530 29.647 1.00 64.76 O
ATOM 6 C5' U B 34 -23.427 -12.120 29.899 1.00 70.01 C
ATOM 7 C4' U B 34 -22.208 -11.516 29.195 1.00 65.00 C
ATOM 8 O4' U B 34 -22.408 -11.624 27.758 1.00 64.72 O
ATOM 9 C3' U B 34 -22.030 -10.019 29.395 1.00 58.47 C
ATOM 10 O3' U B 34 -20.702 -9.603 29.123 1.00 60.61 O
ATOM 11 C2' U B 34 -22.905 -9.480 28.274 1.00 62.74 C
ATOM 12 O2' U B 34 -22.699 -8.107 27.986 1.00 72.72 O
ATOM 13 C1' U B 34 -22.312 -10.331 27.171 1.00 63.35 C
ATOM 14 N1 U B 34 -23.062 -10.297 25.863 1.00 64.61 N
ATOM 15 C2 U B 34 -24.401 -10.632 25.931 1.00 65.56 C
ATOM 16 O2 U B 34 -24.922 -10.918 26.999 1.00 68.93 O
ATOM 17 N3 U B 34 -25.095 -10.612 24.734 1.00 62.65 N
ATOM 18 C4 U B 34 -24.580 -10.285 23.488 1.00 62.98 C
ATOM 19 O4 U B 34 -25.334 -10.302 22.506 1.00 62.26 O
ATOM 20 C5 U B 34 -23.162 -9.956 23.498 1.00 56.92 C
ATOM 21 C6 U B 34 -22.454 -9.966 24.646 1.00 55.64 C
ATOM 22 P C B 35 -19.586 -9.537 30.273 1.00 59.72 P
ATOM 23 OP1 C B 35 -19.890 -10.689 31.168 1.00 64.47 O
ATOM 24 OP2 C B 35 -19.515 -8.144 30.715 1.00 65.65 O
ATOM 25 O5' C B 35 -18.179 -9.927 29.617 1.00 56.71 O
TER
ATOM 2 P C A 35 -19.586 -9.537 30.273 1.00 59.72 P
ATOM 3 OP1 C A 35 -19.890 -10.689 31.168 1.00 64.47 O
ATOM 4 OP2 C A 35 -19.515 -8.144 30.715 1.00 65.65 O
ATOM 5 O5' C A 35 -18.179 -9.927 29.617 1.00 56.71 O
ATOM 6 C5' C A 35 -17.102 -10.338 30.452 1.00 53.01 C
ATOM 7 C4' C A 35 -15.998 -10.724 29.486 1.00 52.07 C
ATOM 8 O4' C A 35 -16.386 -11.972 28.846 1.00 51.35 O
ATOM 9 C3' C A 35 -15.882 -9.757 28.312 1.00 53.46 C
ATOM 10 O3' C A 35 -15.064 -8.589 28.576 1.00 51.57 O
ATOM 11 C2' C A 35 -15.252 -10.642 27.245 1.00 48.54 C
ATOM 12 O2' C A 35 -13.884 -10.868 27.476 1.00 48.59 O
ATOM 13 C1' C A 35 -15.947 -11.962 27.496 1.00 48.94 C
ATOM 14 N1 C A 35 -17.068 -12.222 26.547 1.00 49.68 N
ATOM 15 C2 C A 35 -16.735 -12.506 25.225 1.00 44.34 C
ATOM 16 O2 C A 35 -15.545 -12.514 24.888 1.00 39.39 O
ATOM 17 N3 C A 35 -17.737 -12.754 24.365 1.00 44.69 N
ATOM 18 C4 C A 35 -19.015 -12.730 24.765 1.00 43.11 C
ATOM 19 N4 C A 35 -19.958 -13.011 23.848 1.00 39.86 N
ATOM 20 C5 C A 35 -19.375 -12.456 26.107 1.00 48.58 C
ATOM 21 C6 C A 35 -18.372 -12.208 26.955 1.00 50.35 C
ATOM 22 P C A 36 -15.438 -7.198 27.810 1.00 58.59 P
ATOM 23 OP1 C A 36 -14.643 -6.174 28.545 1.00 54.61 O
ATOM 24 OP2 C A 36 -16.895 -7.034 27.594 1.00 55.63 O
ATOM 25 O5' C A 36 -14.854 -7.335 26.339 1.00 49.80 O
TER
ATOM 1 O3' G B 33 -21.654 -14.004 30.951 1.00 67.44 O
ATOM 2 P U B 34 -23.112 -14.617 30.686 1.00 71.86 P
ATOM 3 OP1 U B 34 -23.831 -14.475 31.987 1.00 72.60 O
ATOM 4 OP2 U B 34 -23.023 -15.950 30.038 1.00 67.70 O
ATOM 5 O5' U B 34 -23.697 -13.530 29.647 1.00 64.76 O
ATOM 6 C5' U B 34 -23.427 -12.120 29.899 1.00 70.01 C
ATOM 7 C4' U B 34 -22.208 -11.516 29.195 1.00 65.00 C
ATOM 8 O4' U B 34 -22.408 -11.624 27.758 1.00 64.72 O
ATOM 9 C3' U B 34 -22.030 -10.019 29.395 1.00 58.47 C
ATOM 10 O3' U B 34 -20.702 -9.603 29.123 1.00 60.61 O
ATOM 11 C2' U B 34 -22.905 -9.480 28.274 1.00 62.74 C
ATOM 12 O2' U B 34 -22.699 -8.107 27.986 1.00 72.72 O
ATOM 13 C1' U B 34 -22.312 -10.331 27.171 1.00 63.35 C
ATOM 14 N1 U B 34 -23.062 -10.297 25.863 1.00 64.61 N
ATOM 15 C2 U B 34 -24.401 -10.632 25.931 1.00 65.56 C
ATOM 16 O2 U B 34 -24.922 -10.918 26.999 1.00 68.93 O
ATOM 17 N3 U B 34 -25.095 -10.612 24.734 1.00 62.65 N
ATOM 18 C4 U B 34 -24.580 -10.285 23.488 1.00 62.98 C
ATOM 19 O4 U B 34 -25.334 -10.302 22.506 1.00 62.26 O
ATOM 20 C5 U B 34 -23.162 -9.956 23.498 1.00 56.92 C
ATOM 21 C6 U B 34 -22.454 -9.966 24.646 1.00 55.64 C
ATOM 22 P C B 35 -19.586 -9.537 30.273 1.00 59.72 P
ATOM 23 OP1 C B 35 -19.890 -10.689 31.168 1.00 64.47 O
ATOM 24 OP2 C B 35 -19.515 -8.144 30.715 1.00 65.65 O
ATOM 25 O5' C B 35 -18.179 -9.927 29.617 1.00 56.71 O
TER
Atoms:
C2: (-16.735,-12.506,25.225)
OP1: (-19.890,-10.689,31.168)
OP2: (-19.515,-8.144,30.715)
C4: (-19.015,-12.730,24.765)
O5': (-18.179,-9.927,29.617)
C3': (-15.882,-9.757,28.312)
C1': (-15.947,-11.962,27.496)
O4': (-16.386,-11.972,28.846)
C5': (-17.102,-10.338,30.452)
P: (-19.586,-9.537,30.273)
O2: (-15.545,-12.514,24.888)
C4': (-15.998,-10.724,29.486)
C2': (-15.252,-10.642,27.245)
O2': (-13.884,-10.868,27.476)
N1: (-17.068,-12.222,26.547)
N3: (-17.737,-12.754,24.365)
N4: (-19.958,-13.011,23.848)
C6: (-18.372,-12.208,26.955)
C5: (-19.375,-12.456,26.107)
O3': (-15.064,-8.589,28.576)
OP1: (-19.890,-10.689,31.168)
OP2: (-19.515,-8.144,30.715)
C4: (-19.015,-12.730,24.765)
O5': (-18.179,-9.927,29.617)
C3': (-15.882,-9.757,28.312)
C1': (-15.947,-11.962,27.496)
O4': (-16.386,-11.972,28.846)
C5': (-17.102,-10.338,30.452)
P: (-19.586,-9.537,30.273)
O2: (-15.545,-12.514,24.888)
C4': (-15.998,-10.724,29.486)
C2': (-15.252,-10.642,27.245)
O2': (-13.884,-10.868,27.476)
N1: (-17.068,-12.222,26.547)
N3: (-17.737,-12.754,24.365)
N4: (-19.958,-13.011,23.848)
C6: (-18.372,-12.208,26.955)
C5: (-19.375,-12.456,26.107)
O3': (-15.064,-8.589,28.576)
C4: (-24.580,-10.285,23.488)
N3: (-25.095,-10.612,24.734)
OP1: (-23.831,-14.475,31.987)
OP2: (-23.023,-15.950,30.038)
C2: (-24.401,-10.632,25.931)
C1': (-22.312,-10.331,27.171)
C3': (-22.030,-10.019,29.395)
O5': (-23.697,-13.530,29.647)
O4': (-22.408,-11.624,27.758)
C5': (-23.427,-12.120,29.899)
P: (-23.112,-14.617,30.686)
C4': (-22.208,-11.516,29.195)
C2': (-22.905,-9.480,28.274)
O2': (-22.699,-8.107,27.986)
N1: (-23.062,-10.297,25.863)
O4: (-25.334,-10.302,22.506)
O2: (-24.922,-10.918,26.999)
C6: (-22.454,-9.966,24.646)
C5: (-23.162,-9.956,23.498)
O3': (-20.702,-9.603,29.123)
N3: (-25.095,-10.612,24.734)
OP1: (-23.831,-14.475,31.987)
OP2: (-23.023,-15.950,30.038)
C2: (-24.401,-10.632,25.931)
C1': (-22.312,-10.331,27.171)
C3': (-22.030,-10.019,29.395)
O5': (-23.697,-13.530,29.647)
O4': (-22.408,-11.624,27.758)
C5': (-23.427,-12.120,29.899)
P: (-23.112,-14.617,30.686)
C4': (-22.208,-11.516,29.195)
C2': (-22.905,-9.480,28.274)
O2': (-22.699,-8.107,27.986)
N1: (-23.062,-10.297,25.863)
O4: (-25.334,-10.302,22.506)
O2: (-24.922,-10.918,26.999)
C6: (-22.454,-9.966,24.646)
C5: (-23.162,-9.956,23.498)
O3': (-20.702,-9.603,29.123)
Image (generated by PyMOL):