Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A35:A34
Extra
PDB:
ATOM 1 O3' U A 34 -20.473 9.388 -28.982 1.00 45.96 O
ATOM 2 P C A 35 -19.496 9.552 -30.240 1.00 48.77 P
ATOM 3 OP1 C A 35 -20.100 10.529 -31.172 1.00 51.34 O
ATOM 4 OP2 C A 35 -19.131 8.201 -30.722 1.00 45.30 O
ATOM 5 O5' C A 35 -18.200 10.224 -29.592 1.00 45.34 O
ATOM 6 C5' C A 35 -16.993 10.304 -30.335 1.00 42.30 C
ATOM 7 C4' C A 35 -15.837 10.601 -29.402 1.00 42.14 C
ATOM 8 O4' C A 35 -16.005 11.917 -28.814 1.00 41.31 O
ATOM 9 C3' C A 35 -15.746 9.680 -28.197 1.00 37.95 C
ATOM 10 O3' C A 35 -15.105 8.459 -28.532 1.00 38.58 O
ATOM 11 C2' C A 35 -14.891 10.530 -27.267 1.00 35.12 C
ATOM 12 O2' C A 35 -13.537 10.557 -27.666 1.00 34.45 O
ATOM 13 C1' C A 35 -15.523 11.900 -27.482 1.00 39.02 C
ATOM 14 N1 C A 35 -16.644 12.178 -26.533 1.00 39.09 N
ATOM 15 C2 C A 35 -16.345 12.526 -25.212 1.00 37.14 C
ATOM 16 O2 C A 35 -15.161 12.598 -24.863 1.00 36.33 O
ATOM 17 N3 C A 35 -17.361 12.778 -24.351 1.00 37.32 N
ATOM 18 C4 C A 35 -18.627 12.691 -24.765 1.00 38.94 C
ATOM 19 N4 C A 35 -19.594 12.947 -23.877 1.00 35.26 N
ATOM 20 C5 C A 35 -18.952 12.335 -26.108 1.00 40.32 C
ATOM 21 C6 C A 35 -17.940 12.089 -26.949 1.00 41.47 C
ATOM 22 P C A 36 -15.474 7.146 -27.699 1.00 37.24 P
ATOM 23 OP1 C A 36 -14.801 5.993 -28.331 1.00 41.20 O
ATOM 24 OP2 C A 36 -16.935 7.131 -27.474 1.00 34.30 O
ATOM 25 O5' C A 36 -14.761 7.407 -26.296 1.00 33.19 O
TER
ATOM 1 O3' G B 33 -21.485 14.541 -31.491 1.00 55.83 O
ATOM 2 P U B 34 -22.785 14.231 -30.616 1.00 63.56 P
ATOM 3 OP1 U B 34 -23.962 14.735 -31.358 1.00 65.43 O
ATOM 4 OP2 U B 34 -22.529 14.699 -29.236 1.00 62.26 O
ATOM 5 O5' U B 34 -22.837 12.632 -30.634 1.00 59.13 O
ATOM 6 C5' U B 34 -23.207 11.916 -29.464 1.00 54.11 C
ATOM 7 C4' U B 34 -21.984 11.277 -28.833 1.00 49.90 C
ATOM 8 O4' U B 34 -22.065 11.439 -27.396 1.00 49.06 O
ATOM 9 C3' U B 34 -21.841 9.777 -29.063 1.00 51.72 C
ATOM 10 O3' U B 34 -20.473 9.388 -28.982 1.00 45.96 O
ATOM 11 C2' U B 34 -22.629 9.223 -27.882 1.00 51.41 C
ATOM 12 O2' U B 34 -22.275 7.891 -27.566 1.00 54.91 O
ATOM 13 C1' U B 34 -22.152 10.168 -26.786 1.00 49.96 C
ATOM 14 N1 U B 34 -23.072 10.270 -25.621 1.00 51.15 N
ATOM 15 C2 U B 34 -22.545 10.172 -24.351 1.00 47.50 C
ATOM 16 O2 U B 34 -21.357 10.006 -24.138 1.00 43.28 O
ATOM 17 N3 U B 34 -23.461 10.277 -23.335 1.00 45.26 N
ATOM 18 C4 U B 34 -24.825 10.464 -23.463 1.00 51.40 C
ATOM 19 O4 U B 34 -25.525 10.537 -22.457 1.00 54.63 O
ATOM 20 C5 U B 34 -25.299 10.556 -24.821 1.00 50.82 C
ATOM 21 C6 U B 34 -24.424 10.458 -25.829 1.00 49.10 C
ATOM 22 P C B 35 -19.496 9.552 -30.240 1.00 48.77 P
ATOM 23 OP1 C B 35 -20.100 10.529 -31.172 1.00 51.34 O
ATOM 24 OP2 C B 35 -19.131 8.201 -30.722 1.00 45.30 O
ATOM 25 O5' C B 35 -18.200 10.224 -29.592 1.00 45.34 O
TER
ATOM 2 P C A 35 -19.496 9.552 -30.240 1.00 48.77 P
ATOM 3 OP1 C A 35 -20.100 10.529 -31.172 1.00 51.34 O
ATOM 4 OP2 C A 35 -19.131 8.201 -30.722 1.00 45.30 O
ATOM 5 O5' C A 35 -18.200 10.224 -29.592 1.00 45.34 O
ATOM 6 C5' C A 35 -16.993 10.304 -30.335 1.00 42.30 C
ATOM 7 C4' C A 35 -15.837 10.601 -29.402 1.00 42.14 C
ATOM 8 O4' C A 35 -16.005 11.917 -28.814 1.00 41.31 O
ATOM 9 C3' C A 35 -15.746 9.680 -28.197 1.00 37.95 C
ATOM 10 O3' C A 35 -15.105 8.459 -28.532 1.00 38.58 O
ATOM 11 C2' C A 35 -14.891 10.530 -27.267 1.00 35.12 C
ATOM 12 O2' C A 35 -13.537 10.557 -27.666 1.00 34.45 O
ATOM 13 C1' C A 35 -15.523 11.900 -27.482 1.00 39.02 C
ATOM 14 N1 C A 35 -16.644 12.178 -26.533 1.00 39.09 N
ATOM 15 C2 C A 35 -16.345 12.526 -25.212 1.00 37.14 C
ATOM 16 O2 C A 35 -15.161 12.598 -24.863 1.00 36.33 O
ATOM 17 N3 C A 35 -17.361 12.778 -24.351 1.00 37.32 N
ATOM 18 C4 C A 35 -18.627 12.691 -24.765 1.00 38.94 C
ATOM 19 N4 C A 35 -19.594 12.947 -23.877 1.00 35.26 N
ATOM 20 C5 C A 35 -18.952 12.335 -26.108 1.00 40.32 C
ATOM 21 C6 C A 35 -17.940 12.089 -26.949 1.00 41.47 C
ATOM 22 P C A 36 -15.474 7.146 -27.699 1.00 37.24 P
ATOM 23 OP1 C A 36 -14.801 5.993 -28.331 1.00 41.20 O
ATOM 24 OP2 C A 36 -16.935 7.131 -27.474 1.00 34.30 O
ATOM 25 O5' C A 36 -14.761 7.407 -26.296 1.00 33.19 O
TER
ATOM 1 O3' G B 33 -21.485 14.541 -31.491 1.00 55.83 O
ATOM 2 P U B 34 -22.785 14.231 -30.616 1.00 63.56 P
ATOM 3 OP1 U B 34 -23.962 14.735 -31.358 1.00 65.43 O
ATOM 4 OP2 U B 34 -22.529 14.699 -29.236 1.00 62.26 O
ATOM 5 O5' U B 34 -22.837 12.632 -30.634 1.00 59.13 O
ATOM 6 C5' U B 34 -23.207 11.916 -29.464 1.00 54.11 C
ATOM 7 C4' U B 34 -21.984 11.277 -28.833 1.00 49.90 C
ATOM 8 O4' U B 34 -22.065 11.439 -27.396 1.00 49.06 O
ATOM 9 C3' U B 34 -21.841 9.777 -29.063 1.00 51.72 C
ATOM 10 O3' U B 34 -20.473 9.388 -28.982 1.00 45.96 O
ATOM 11 C2' U B 34 -22.629 9.223 -27.882 1.00 51.41 C
ATOM 12 O2' U B 34 -22.275 7.891 -27.566 1.00 54.91 O
ATOM 13 C1' U B 34 -22.152 10.168 -26.786 1.00 49.96 C
ATOM 14 N1 U B 34 -23.072 10.270 -25.621 1.00 51.15 N
ATOM 15 C2 U B 34 -22.545 10.172 -24.351 1.00 47.50 C
ATOM 16 O2 U B 34 -21.357 10.006 -24.138 1.00 43.28 O
ATOM 17 N3 U B 34 -23.461 10.277 -23.335 1.00 45.26 N
ATOM 18 C4 U B 34 -24.825 10.464 -23.463 1.00 51.40 C
ATOM 19 O4 U B 34 -25.525 10.537 -22.457 1.00 54.63 O
ATOM 20 C5 U B 34 -25.299 10.556 -24.821 1.00 50.82 C
ATOM 21 C6 U B 34 -24.424 10.458 -25.829 1.00 49.10 C
ATOM 22 P C B 35 -19.496 9.552 -30.240 1.00 48.77 P
ATOM 23 OP1 C B 35 -20.100 10.529 -31.172 1.00 51.34 O
ATOM 24 OP2 C B 35 -19.131 8.201 -30.722 1.00 45.30 O
ATOM 25 O5' C B 35 -18.200 10.224 -29.592 1.00 45.34 O
TER
Atoms:
C2: (-16.345,12.526,-25.212)
OP1: (-20.100,10.529,-31.172)
OP2: (-19.131,8.201,-30.722)
C4: (-18.627,12.691,-24.765)
O5': (-18.200,10.224,-29.592)
C3': (-15.746,9.680,-28.197)
C1': (-15.523,11.900,-27.482)
O4': (-16.005,11.917,-28.814)
C5': (-16.993,10.304,-30.335)
P: (-19.496,9.552,-30.240)
O2: (-15.161,12.598,-24.863)
C4': (-15.837,10.601,-29.402)
C2': (-14.891,10.530,-27.267)
O2': (-13.537,10.557,-27.666)
N1: (-16.644,12.178,-26.533)
N3: (-17.361,12.778,-24.351)
N4: (-19.594,12.947,-23.877)
C6: (-17.940,12.089,-26.949)
C5: (-18.952,12.335,-26.108)
O3': (-15.105,8.459,-28.532)
OP1: (-20.100,10.529,-31.172)
OP2: (-19.131,8.201,-30.722)
C4: (-18.627,12.691,-24.765)
O5': (-18.200,10.224,-29.592)
C3': (-15.746,9.680,-28.197)
C1': (-15.523,11.900,-27.482)
O4': (-16.005,11.917,-28.814)
C5': (-16.993,10.304,-30.335)
P: (-19.496,9.552,-30.240)
O2: (-15.161,12.598,-24.863)
C4': (-15.837,10.601,-29.402)
C2': (-14.891,10.530,-27.267)
O2': (-13.537,10.557,-27.666)
N1: (-16.644,12.178,-26.533)
N3: (-17.361,12.778,-24.351)
N4: (-19.594,12.947,-23.877)
C6: (-17.940,12.089,-26.949)
C5: (-18.952,12.335,-26.108)
O3': (-15.105,8.459,-28.532)
C4: (-24.825,10.464,-23.463)
N3: (-23.461,10.277,-23.335)
OP1: (-23.962,14.735,-31.358)
OP2: (-22.529,14.699,-29.236)
C2: (-22.545,10.172,-24.351)
C1': (-22.152,10.168,-26.786)
C3': (-21.841,9.777,-29.063)
O5': (-22.837,12.632,-30.634)
O4': (-22.065,11.439,-27.396)
C5': (-23.207,11.916,-29.464)
P: (-22.785,14.231,-30.616)
C4': (-21.984,11.277,-28.833)
C2': (-22.629,9.223,-27.882)
O2': (-22.275,7.891,-27.566)
N1: (-23.072,10.270,-25.621)
O4: (-25.525,10.537,-22.457)
O2: (-21.357,10.006,-24.138)
C6: (-24.424,10.458,-25.829)
C5: (-25.299,10.556,-24.821)
O3': (-20.473,9.388,-28.982)
N3: (-23.461,10.277,-23.335)
OP1: (-23.962,14.735,-31.358)
OP2: (-22.529,14.699,-29.236)
C2: (-22.545,10.172,-24.351)
C1': (-22.152,10.168,-26.786)
C3': (-21.841,9.777,-29.063)
O5': (-22.837,12.632,-30.634)
O4': (-22.065,11.439,-27.396)
C5': (-23.207,11.916,-29.464)
P: (-22.785,14.231,-30.616)
C4': (-21.984,11.277,-28.833)
C2': (-22.629,9.223,-27.882)
O2': (-22.275,7.891,-27.566)
N1: (-23.072,10.270,-25.621)
O4: (-25.525,10.537,-22.457)
O2: (-21.357,10.006,-24.138)
C6: (-24.424,10.458,-25.829)
C5: (-25.299,10.556,-24.821)
O3': (-20.473,9.388,-28.982)
Image (generated by PyMOL):