Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B35:B34
Extra
PDB:
ATOM 1 O3' U A 34 -23.898 45.364 1.293 1.00 51.68 O
ATOM 2 P C A 35 -23.058 45.085 2.627 1.00 55.72 P
ATOM 3 OP1 C A 35 -23.759 44.055 3.423 1.00 46.91 O
ATOM 4 OP2 C A 35 -22.737 46.395 3.238 1.00 53.90 O
ATOM 5 O5' C A 35 -21.708 44.444 2.056 1.00 44.08 O
ATOM 6 C5' C A 35 -20.582 44.311 2.912 1.00 44.79 C
ATOM 7 C4' C A 35 -19.310 44.170 2.099 1.00 44.08 C
ATOM 8 O4' C A 35 -19.283 42.870 1.457 1.00 40.73 O
ATOM 9 C3' C A 35 -19.162 45.164 0.955 1.00 39.97 C
ATOM 10 O3' C A 35 -18.600 46.377 1.418 1.00 41.85 O
ATOM 11 C2' C A 35 -18.175 44.422 0.068 1.00 41.26 C
ATOM 12 O2' C A 35 -16.865 44.480 0.593 1.00 38.65 O
ATOM 13 C1' C A 35 -18.700 42.996 0.174 1.00 39.86 C
ATOM 14 N1 C A 35 -19.716 42.649 -0.858 1.00 42.81 N
ATOM 15 C2 C A 35 -19.293 42.391 -2.165 1.00 42.57 C
ATOM 16 O2 C A 35 -18.087 42.465 -2.430 1.00 39.37 O
ATOM 17 N3 C A 35 -20.215 42.070 -3.105 1.00 43.03 N
ATOM 18 C4 C A 35 -21.505 42.001 -2.776 1.00 44.65 C
ATOM 19 N4 C A 35 -22.376 41.679 -3.739 1.00 42.63 N
ATOM 20 C5 C A 35 -21.957 42.261 -1.448 1.00 47.05 C
ATOM 21 C6 C A 35 -21.037 42.576 -0.529 1.00 44.02 C
ATOM 22 P C A 36 -18.893 47.736 0.625 1.00 43.00 P
ATOM 23 OP1 C A 36 -18.302 48.843 1.408 1.00 41.08 O
ATOM 24 OP2 C A 36 -20.326 47.752 0.260 1.00 42.94 O
ATOM 25 O5' C A 36 -18.035 47.573 -0.716 1.00 41.53 O
TER
ATOM 1 O3' G B 33 -24.960 40.277 3.577 1.00 59.46 O
ATOM 2 P U B 34 -26.299 40.144 2.713 1.00 64.05 P
ATOM 3 OP1 U B 34 -27.412 40.689 3.526 1.00 56.91 O
ATOM 4 OP2 U B 34 -26.368 38.764 2.183 1.00 56.97 O
ATOM 5 O5' U B 34 -26.044 41.161 1.507 1.00 55.47 O
ATOM 6 C5' U B 34 -26.171 42.556 1.741 1.00 53.76 C
ATOM 7 C4' U B 34 -25.157 43.335 0.926 1.00 53.21 C
ATOM 8 O4' U B 34 -25.372 43.107 -0.491 1.00 51.59 O
ATOM 9 C3' U B 34 -25.211 44.847 1.132 1.00 52.71 C
ATOM 10 O3' U B 34 -23.898 45.364 1.293 1.00 51.68 O
ATOM 11 C2' U B 34 -25.846 45.353 -0.158 1.00 52.34 C
ATOM 12 O2' U B 34 -25.426 46.660 -0.490 1.00 55.00 O
ATOM 13 C1' U B 34 -25.279 44.351 -1.152 1.00 51.40 C
ATOM 14 N1 U B 34 -26.028 44.296 -2.435 1.00 52.37 N
ATOM 15 C2 U B 34 -27.278 43.715 -2.474 1.00 56.25 C
ATOM 16 O2 U B 34 -27.820 43.230 -1.498 1.00 62.86 O
ATOM 17 N3 U B 34 -27.878 43.721 -3.708 1.00 58.04 N
ATOM 18 C4 U B 34 -27.364 44.239 -4.882 1.00 56.26 C
ATOM 19 O4 U B 34 -28.019 44.172 -5.917 1.00 60.47 O
ATOM 20 C5 U B 34 -26.057 44.829 -4.758 1.00 54.20 C
ATOM 21 C6 U B 34 -25.451 44.834 -3.566 1.00 53.71 C
ATOM 22 P C B 35 -23.058 45.085 2.627 1.00 55.72 P
ATOM 23 OP1 C B 35 -23.759 44.055 3.423 1.00 46.91 O
ATOM 24 OP2 C B 35 -22.737 46.395 3.238 1.00 53.90 O
ATOM 25 O5' C B 35 -21.708 44.444 2.056 1.00 44.08 O
TER
ATOM 2 P C A 35 -23.058 45.085 2.627 1.00 55.72 P
ATOM 3 OP1 C A 35 -23.759 44.055 3.423 1.00 46.91 O
ATOM 4 OP2 C A 35 -22.737 46.395 3.238 1.00 53.90 O
ATOM 5 O5' C A 35 -21.708 44.444 2.056 1.00 44.08 O
ATOM 6 C5' C A 35 -20.582 44.311 2.912 1.00 44.79 C
ATOM 7 C4' C A 35 -19.310 44.170 2.099 1.00 44.08 C
ATOM 8 O4' C A 35 -19.283 42.870 1.457 1.00 40.73 O
ATOM 9 C3' C A 35 -19.162 45.164 0.955 1.00 39.97 C
ATOM 10 O3' C A 35 -18.600 46.377 1.418 1.00 41.85 O
ATOM 11 C2' C A 35 -18.175 44.422 0.068 1.00 41.26 C
ATOM 12 O2' C A 35 -16.865 44.480 0.593 1.00 38.65 O
ATOM 13 C1' C A 35 -18.700 42.996 0.174 1.00 39.86 C
ATOM 14 N1 C A 35 -19.716 42.649 -0.858 1.00 42.81 N
ATOM 15 C2 C A 35 -19.293 42.391 -2.165 1.00 42.57 C
ATOM 16 O2 C A 35 -18.087 42.465 -2.430 1.00 39.37 O
ATOM 17 N3 C A 35 -20.215 42.070 -3.105 1.00 43.03 N
ATOM 18 C4 C A 35 -21.505 42.001 -2.776 1.00 44.65 C
ATOM 19 N4 C A 35 -22.376 41.679 -3.739 1.00 42.63 N
ATOM 20 C5 C A 35 -21.957 42.261 -1.448 1.00 47.05 C
ATOM 21 C6 C A 35 -21.037 42.576 -0.529 1.00 44.02 C
ATOM 22 P C A 36 -18.893 47.736 0.625 1.00 43.00 P
ATOM 23 OP1 C A 36 -18.302 48.843 1.408 1.00 41.08 O
ATOM 24 OP2 C A 36 -20.326 47.752 0.260 1.00 42.94 O
ATOM 25 O5' C A 36 -18.035 47.573 -0.716 1.00 41.53 O
TER
ATOM 1 O3' G B 33 -24.960 40.277 3.577 1.00 59.46 O
ATOM 2 P U B 34 -26.299 40.144 2.713 1.00 64.05 P
ATOM 3 OP1 U B 34 -27.412 40.689 3.526 1.00 56.91 O
ATOM 4 OP2 U B 34 -26.368 38.764 2.183 1.00 56.97 O
ATOM 5 O5' U B 34 -26.044 41.161 1.507 1.00 55.47 O
ATOM 6 C5' U B 34 -26.171 42.556 1.741 1.00 53.76 C
ATOM 7 C4' U B 34 -25.157 43.335 0.926 1.00 53.21 C
ATOM 8 O4' U B 34 -25.372 43.107 -0.491 1.00 51.59 O
ATOM 9 C3' U B 34 -25.211 44.847 1.132 1.00 52.71 C
ATOM 10 O3' U B 34 -23.898 45.364 1.293 1.00 51.68 O
ATOM 11 C2' U B 34 -25.846 45.353 -0.158 1.00 52.34 C
ATOM 12 O2' U B 34 -25.426 46.660 -0.490 1.00 55.00 O
ATOM 13 C1' U B 34 -25.279 44.351 -1.152 1.00 51.40 C
ATOM 14 N1 U B 34 -26.028 44.296 -2.435 1.00 52.37 N
ATOM 15 C2 U B 34 -27.278 43.715 -2.474 1.00 56.25 C
ATOM 16 O2 U B 34 -27.820 43.230 -1.498 1.00 62.86 O
ATOM 17 N3 U B 34 -27.878 43.721 -3.708 1.00 58.04 N
ATOM 18 C4 U B 34 -27.364 44.239 -4.882 1.00 56.26 C
ATOM 19 O4 U B 34 -28.019 44.172 -5.917 1.00 60.47 O
ATOM 20 C5 U B 34 -26.057 44.829 -4.758 1.00 54.20 C
ATOM 21 C6 U B 34 -25.451 44.834 -3.566 1.00 53.71 C
ATOM 22 P C B 35 -23.058 45.085 2.627 1.00 55.72 P
ATOM 23 OP1 C B 35 -23.759 44.055 3.423 1.00 46.91 O
ATOM 24 OP2 C B 35 -22.737 46.395 3.238 1.00 53.90 O
ATOM 25 O5' C B 35 -21.708 44.444 2.056 1.00 44.08 O
TER
Atoms:
C2: (-19.293,42.391,-2.165)
OP1: (-23.759,44.055,3.423)
OP2: (-22.737,46.395,3.238)
C4: (-21.505,42.001,-2.776)
O5': (-21.708,44.444,2.056)
C3': (-19.162,45.164,0.955)
C1': (-18.700,42.996,0.174)
O4': (-19.283,42.870,1.457)
C5': (-20.582,44.311,2.912)
P: (-23.058,45.085,2.627)
O2: (-18.087,42.465,-2.430)
C4': (-19.310,44.170,2.099)
C2': (-18.175,44.422,0.068)
O2': (-16.865,44.480,0.593)
N1: (-19.716,42.649,-0.858)
N3: (-20.215,42.070,-3.105)
N4: (-22.376,41.679,-3.739)
C6: (-21.037,42.576,-0.529)
C5: (-21.957,42.261,-1.448)
O3': (-18.600,46.377,1.418)
OP1: (-23.759,44.055,3.423)
OP2: (-22.737,46.395,3.238)
C4: (-21.505,42.001,-2.776)
O5': (-21.708,44.444,2.056)
C3': (-19.162,45.164,0.955)
C1': (-18.700,42.996,0.174)
O4': (-19.283,42.870,1.457)
C5': (-20.582,44.311,2.912)
P: (-23.058,45.085,2.627)
O2: (-18.087,42.465,-2.430)
C4': (-19.310,44.170,2.099)
C2': (-18.175,44.422,0.068)
O2': (-16.865,44.480,0.593)
N1: (-19.716,42.649,-0.858)
N3: (-20.215,42.070,-3.105)
N4: (-22.376,41.679,-3.739)
C6: (-21.037,42.576,-0.529)
C5: (-21.957,42.261,-1.448)
O3': (-18.600,46.377,1.418)
C4: (-27.364,44.239,-4.882)
N3: (-27.878,43.721,-3.708)
OP1: (-27.412,40.689,3.526)
OP2: (-26.368,38.764,2.183)
C2: (-27.278,43.715,-2.474)
C1': (-25.279,44.351,-1.152)
C3': (-25.211,44.847,1.132)
O5': (-26.044,41.161,1.507)
O4': (-25.372,43.107,-0.491)
C5': (-26.171,42.556,1.741)
P: (-26.299,40.144,2.713)
C4': (-25.157,43.335,0.926)
C2': (-25.846,45.353,-0.158)
O2': (-25.426,46.660,-0.490)
N1: (-26.028,44.296,-2.435)
O4: (-28.019,44.172,-5.917)
O2: (-27.820,43.230,-1.498)
C6: (-25.451,44.834,-3.566)
C5: (-26.057,44.829,-4.758)
O3': (-23.898,45.364,1.293)
N3: (-27.878,43.721,-3.708)
OP1: (-27.412,40.689,3.526)
OP2: (-26.368,38.764,2.183)
C2: (-27.278,43.715,-2.474)
C1': (-25.279,44.351,-1.152)
C3': (-25.211,44.847,1.132)
O5': (-26.044,41.161,1.507)
O4': (-25.372,43.107,-0.491)
C5': (-26.171,42.556,1.741)
P: (-26.299,40.144,2.713)
C4': (-25.157,43.335,0.926)
C2': (-25.846,45.353,-0.158)
O2': (-25.426,46.660,-0.490)
N1: (-26.028,44.296,-2.435)
O4: (-28.019,44.172,-5.917)
O2: (-27.820,43.230,-1.498)
C6: (-25.451,44.834,-3.566)
C5: (-26.057,44.829,-4.758)
O3': (-23.898,45.364,1.293)
Image (generated by PyMOL):