Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B35:B34
Extra
PDB:
ATOM 1 O3' U A 34 -24.253 -10.334 28.512 1.00 48.08 O
ATOM 2 P C A 35 -23.561 -10.512 29.958 1.00 47.75 P
ATOM 3 OP1 C A 35 -24.348 -11.480 30.766 1.00 47.25 O
ATOM 4 OP2 C A 35 -23.305 -9.141 30.492 1.00 48.14 O
ATOM 5 O5' C A 35 -22.151 -11.177 29.617 1.00 46.35 O
ATOM 6 C5' C A 35 -21.032 -11.086 30.531 1.00 43.27 C
ATOM 7 C4' C A 35 -19.716 -11.261 29.786 1.00 41.41 C
ATOM 8 O4' C A 35 -19.693 -12.566 29.144 1.00 40.69 O
ATOM 9 C3' C A 35 -19.417 -10.270 28.665 1.00 39.87 C
ATOM 10 O3' C A 35 -18.779 -9.096 29.156 1.00 38.44 O
ATOM 11 C2' C A 35 -18.466 -11.056 27.776 1.00 39.46 C
ATOM 12 O2' C A 35 -17.158 -11.034 28.302 1.00 39.45 O
ATOM 13 C1' C A 35 -19.023 -12.475 27.899 1.00 39.49 C
ATOM 14 N1 C A 35 -19.984 -12.812 26.829 1.00 38.53 N
ATOM 15 C2 C A 35 -19.501 -13.114 25.543 1.00 38.92 C
ATOM 16 O2 C A 35 -18.279 -13.088 25.332 1.00 39.13 O
ATOM 17 N3 C A 35 -20.382 -13.418 24.561 1.00 38.90 N
ATOM 18 C4 C A 35 -21.692 -13.419 24.815 1.00 37.88 C
ATOM 19 N4 C A 35 -22.523 -13.709 23.810 1.00 36.77 N
ATOM 20 C5 C A 35 -22.207 -13.117 26.109 1.00 37.89 C
ATOM 21 C6 C A 35 -21.328 -12.825 27.076 1.00 37.68 C
ATOM 22 P C A 36 -18.956 -7.703 28.371 1.00 37.59 P
ATOM 23 OP1 C A 36 -18.310 -6.620 29.156 1.00 37.26 O
ATOM 24 OP2 C A 36 -20.393 -7.596 28.004 1.00 37.81 O
ATOM 25 O5' C A 36 -18.121 -7.891 27.028 1.00 36.91 O
TER
ATOM 1 O3' G B 33 -25.765 -15.732 30.971 1.00 49.61 O
ATOM 2 P U B 34 -26.724 -15.290 29.751 1.00 50.47 P
ATOM 3 OP1 U B 34 -28.111 -15.187 30.263 1.00 50.67 O
ATOM 4 OP2 U B 34 -26.436 -16.182 28.591 1.00 50.13 O
ATOM 5 O5' U B 34 -26.225 -13.819 29.383 1.00 50.41 O
ATOM 6 C5' U B 34 -26.495 -13.263 28.085 1.00 50.28 C
ATOM 7 C4' U B 34 -25.420 -12.279 27.701 1.00 49.69 C
ATOM 8 O4' U B 34 -25.395 -12.155 26.257 1.00 50.02 O
ATOM 9 C3' U B 34 -25.560 -10.865 28.264 1.00 49.49 C
ATOM 10 O3' U B 34 -24.253 -10.334 28.512 1.00 48.08 O
ATOM 11 C2' U B 34 -26.172 -10.099 27.087 1.00 50.27 C
ATOM 12 O2' U B 34 -25.854 -8.722 27.069 1.00 50.72 O
ATOM 13 C1' U B 34 -25.502 -10.795 25.906 1.00 50.71 C
ATOM 14 N1 U B 34 -26.139 -10.673 24.583 1.00 51.49 N
ATOM 15 C2 U B 34 -27.090 -11.612 24.185 1.00 52.16 C
ATOM 16 O2 U B 34 -27.506 -12.500 24.912 1.00 51.77 O
ATOM 17 N3 U B 34 -27.541 -11.461 22.898 1.00 52.48 N
ATOM 18 C4 U B 34 -27.173 -10.482 21.997 1.00 54.20 C
ATOM 19 O4 U B 34 -27.587 -10.539 20.836 1.00 55.32 O
ATOM 20 C5 U B 34 -26.237 -9.526 22.503 1.00 54.03 C
ATOM 21 C6 U B 34 -25.765 -9.654 23.745 1.00 53.05 C
ATOM 22 P C B 35 -23.561 -10.512 29.958 1.00 47.75 P
ATOM 23 OP1 C B 35 -24.348 -11.480 30.766 1.00 47.25 O
ATOM 24 OP2 C B 35 -23.305 -9.141 30.492 1.00 48.14 O
ATOM 25 O5' C B 35 -22.151 -11.177 29.617 1.00 46.35 O
TER
ATOM 2 P C A 35 -23.561 -10.512 29.958 1.00 47.75 P
ATOM 3 OP1 C A 35 -24.348 -11.480 30.766 1.00 47.25 O
ATOM 4 OP2 C A 35 -23.305 -9.141 30.492 1.00 48.14 O
ATOM 5 O5' C A 35 -22.151 -11.177 29.617 1.00 46.35 O
ATOM 6 C5' C A 35 -21.032 -11.086 30.531 1.00 43.27 C
ATOM 7 C4' C A 35 -19.716 -11.261 29.786 1.00 41.41 C
ATOM 8 O4' C A 35 -19.693 -12.566 29.144 1.00 40.69 O
ATOM 9 C3' C A 35 -19.417 -10.270 28.665 1.00 39.87 C
ATOM 10 O3' C A 35 -18.779 -9.096 29.156 1.00 38.44 O
ATOM 11 C2' C A 35 -18.466 -11.056 27.776 1.00 39.46 C
ATOM 12 O2' C A 35 -17.158 -11.034 28.302 1.00 39.45 O
ATOM 13 C1' C A 35 -19.023 -12.475 27.899 1.00 39.49 C
ATOM 14 N1 C A 35 -19.984 -12.812 26.829 1.00 38.53 N
ATOM 15 C2 C A 35 -19.501 -13.114 25.543 1.00 38.92 C
ATOM 16 O2 C A 35 -18.279 -13.088 25.332 1.00 39.13 O
ATOM 17 N3 C A 35 -20.382 -13.418 24.561 1.00 38.90 N
ATOM 18 C4 C A 35 -21.692 -13.419 24.815 1.00 37.88 C
ATOM 19 N4 C A 35 -22.523 -13.709 23.810 1.00 36.77 N
ATOM 20 C5 C A 35 -22.207 -13.117 26.109 1.00 37.89 C
ATOM 21 C6 C A 35 -21.328 -12.825 27.076 1.00 37.68 C
ATOM 22 P C A 36 -18.956 -7.703 28.371 1.00 37.59 P
ATOM 23 OP1 C A 36 -18.310 -6.620 29.156 1.00 37.26 O
ATOM 24 OP2 C A 36 -20.393 -7.596 28.004 1.00 37.81 O
ATOM 25 O5' C A 36 -18.121 -7.891 27.028 1.00 36.91 O
TER
ATOM 1 O3' G B 33 -25.765 -15.732 30.971 1.00 49.61 O
ATOM 2 P U B 34 -26.724 -15.290 29.751 1.00 50.47 P
ATOM 3 OP1 U B 34 -28.111 -15.187 30.263 1.00 50.67 O
ATOM 4 OP2 U B 34 -26.436 -16.182 28.591 1.00 50.13 O
ATOM 5 O5' U B 34 -26.225 -13.819 29.383 1.00 50.41 O
ATOM 6 C5' U B 34 -26.495 -13.263 28.085 1.00 50.28 C
ATOM 7 C4' U B 34 -25.420 -12.279 27.701 1.00 49.69 C
ATOM 8 O4' U B 34 -25.395 -12.155 26.257 1.00 50.02 O
ATOM 9 C3' U B 34 -25.560 -10.865 28.264 1.00 49.49 C
ATOM 10 O3' U B 34 -24.253 -10.334 28.512 1.00 48.08 O
ATOM 11 C2' U B 34 -26.172 -10.099 27.087 1.00 50.27 C
ATOM 12 O2' U B 34 -25.854 -8.722 27.069 1.00 50.72 O
ATOM 13 C1' U B 34 -25.502 -10.795 25.906 1.00 50.71 C
ATOM 14 N1 U B 34 -26.139 -10.673 24.583 1.00 51.49 N
ATOM 15 C2 U B 34 -27.090 -11.612 24.185 1.00 52.16 C
ATOM 16 O2 U B 34 -27.506 -12.500 24.912 1.00 51.77 O
ATOM 17 N3 U B 34 -27.541 -11.461 22.898 1.00 52.48 N
ATOM 18 C4 U B 34 -27.173 -10.482 21.997 1.00 54.20 C
ATOM 19 O4 U B 34 -27.587 -10.539 20.836 1.00 55.32 O
ATOM 20 C5 U B 34 -26.237 -9.526 22.503 1.00 54.03 C
ATOM 21 C6 U B 34 -25.765 -9.654 23.745 1.00 53.05 C
ATOM 22 P C B 35 -23.561 -10.512 29.958 1.00 47.75 P
ATOM 23 OP1 C B 35 -24.348 -11.480 30.766 1.00 47.25 O
ATOM 24 OP2 C B 35 -23.305 -9.141 30.492 1.00 48.14 O
ATOM 25 O5' C B 35 -22.151 -11.177 29.617 1.00 46.35 O
TER
Atoms:
C2: (-19.501,-13.114,25.543)
OP1: (-24.348,-11.480,30.766)
OP2: (-23.305,-9.141,30.492)
C4: (-21.692,-13.419,24.815)
O5': (-22.151,-11.177,29.617)
C3': (-19.417,-10.270,28.665)
C1': (-19.023,-12.475,27.899)
O4': (-19.693,-12.566,29.144)
C5': (-21.032,-11.086,30.531)
P: (-23.561,-10.512,29.958)
O2: (-18.279,-13.088,25.332)
C4': (-19.716,-11.261,29.786)
C2': (-18.466,-11.056,27.776)
O2': (-17.158,-11.034,28.302)
N1: (-19.984,-12.812,26.829)
N3: (-20.382,-13.418,24.561)
N4: (-22.523,-13.709,23.810)
C6: (-21.328,-12.825,27.076)
C5: (-22.207,-13.117,26.109)
O3': (-18.779,-9.096,29.156)
OP1: (-24.348,-11.480,30.766)
OP2: (-23.305,-9.141,30.492)
C4: (-21.692,-13.419,24.815)
O5': (-22.151,-11.177,29.617)
C3': (-19.417,-10.270,28.665)
C1': (-19.023,-12.475,27.899)
O4': (-19.693,-12.566,29.144)
C5': (-21.032,-11.086,30.531)
P: (-23.561,-10.512,29.958)
O2: (-18.279,-13.088,25.332)
C4': (-19.716,-11.261,29.786)
C2': (-18.466,-11.056,27.776)
O2': (-17.158,-11.034,28.302)
N1: (-19.984,-12.812,26.829)
N3: (-20.382,-13.418,24.561)
N4: (-22.523,-13.709,23.810)
C6: (-21.328,-12.825,27.076)
C5: (-22.207,-13.117,26.109)
O3': (-18.779,-9.096,29.156)
C4: (-27.173,-10.482,21.997)
N3: (-27.541,-11.461,22.898)
OP1: (-28.111,-15.187,30.263)
OP2: (-26.436,-16.182,28.591)
C2: (-27.090,-11.612,24.185)
C1': (-25.502,-10.795,25.906)
C3': (-25.560,-10.865,28.264)
O5': (-26.225,-13.819,29.383)
O4': (-25.395,-12.155,26.257)
C5': (-26.495,-13.263,28.085)
P: (-26.724,-15.290,29.751)
C4': (-25.420,-12.279,27.701)
C2': (-26.172,-10.099,27.087)
O2': (-25.854,-8.722,27.069)
N1: (-26.139,-10.673,24.583)
O4: (-27.587,-10.539,20.836)
O2: (-27.506,-12.500,24.912)
C6: (-25.765,-9.654,23.745)
C5: (-26.237,-9.526,22.503)
O3': (-24.253,-10.334,28.512)
N3: (-27.541,-11.461,22.898)
OP1: (-28.111,-15.187,30.263)
OP2: (-26.436,-16.182,28.591)
C2: (-27.090,-11.612,24.185)
C1': (-25.502,-10.795,25.906)
C3': (-25.560,-10.865,28.264)
O5': (-26.225,-13.819,29.383)
O4': (-25.395,-12.155,26.257)
C5': (-26.495,-13.263,28.085)
P: (-26.724,-15.290,29.751)
C4': (-25.420,-12.279,27.701)
C2': (-26.172,-10.099,27.087)
O2': (-25.854,-8.722,27.069)
N1: (-26.139,-10.673,24.583)
O4: (-27.587,-10.539,20.836)
O2: (-27.506,-12.500,24.912)
C6: (-25.765,-9.654,23.745)
C5: (-26.237,-9.526,22.503)
O3': (-24.253,-10.334,28.512)
Image (generated by PyMOL):