Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A1040:A1041
Extra
PDB:
ATOM 1 O3' A A1039 -122.887 -84.814 -28.604 1.00114.42 O
ATOM 2 P A A1040 -122.576 -83.285 -28.954 1.00114.97 P
ATOM 3 OP1 A A1040 -123.811 -82.653 -29.469 1.00113.59 O
ATOM 4 OP2 A A1040 -121.353 -83.268 -29.784 1.00105.80 O
ATOM 5 O5' A A1040 -122.239 -82.638 -27.528 1.00 97.01 O
ATOM 6 C5' A A1040 -121.077 -82.999 -26.815 1.00 92.69 C
ATOM 7 C4' A A1040 -120.759 -81.952 -25.772 1.00 92.20 C
ATOM 8 O4' A A1040 -121.659 -82.085 -24.636 1.00 92.76 O
ATOM 9 C3' A A1040 -119.366 -82.107 -25.189 1.00 86.95 C
ATOM 10 O3' A A1040 -118.405 -81.349 -25.916 1.00 83.74 O
ATOM 11 C2' A A1040 -119.593 -81.600 -23.771 1.00 94.02 C
ATOM 12 O2' A A1040 -119.812 -80.204 -23.742 1.00 96.57 O
ATOM 13 C1' A A1040 -120.894 -82.323 -23.473 1.00 94.65 C
ATOM 14 N9 A A1040 -120.759 -83.771 -23.355 1.00102.68 N
ATOM 15 C8 A A1040 -119.655 -84.565 -23.531 1.00 98.70 C
ATOM 16 N7 A A1040 -119.873 -85.847 -23.363 1.00 90.43 N
ATOM 17 C5 A A1040 -121.220 -85.898 -23.066 1.00 92.45 C
ATOM 18 C6 A A1040 -122.085 -86.969 -22.782 1.00 95.65 C
ATOM 19 N6 A A1040 -121.714 -88.251 -22.753 1.00 91.07 N
ATOM 20 N1 A A1040 -123.368 -86.658 -22.527 1.00107.86 N
ATOM 21 C2 A A1040 -123.748 -85.371 -22.559 1.00101.24 C
ATOM 22 N3 A A1040 -123.035 -84.280 -22.814 1.00 91.46 N
ATOM 23 C4 A A1040 -121.773 -84.629 -23.060 1.00 96.03 C
ATOM 24 P G A1041 -116.893 -81.886 -26.026 1.00 80.86 P
ATOM 25 OP1 G A1041 -116.033 -80.708 -26.291 1.00 86.03 O
ATOM 26 OP2 G A1041 -116.889 -83.035 -26.963 1.00 89.44 O
ATOM 27 O5' G A1041 -116.559 -82.446 -24.559 1.00 89.73 O
TER
ATOM 1 O3' A B1040 -118.405 -81.349 -25.916 1.00 83.74 O
ATOM 2 P G B1041 -116.893 -81.886 -26.026 1.00 80.86 P
ATOM 3 OP1 G B1041 -116.033 -80.708 -26.291 1.00 86.03 O
ATOM 4 OP2 G B1041 -116.889 -83.035 -26.963 1.00 89.44 O
ATOM 5 O5' G B1041 -116.559 -82.446 -24.559 1.00 89.73 O
ATOM 6 C5' G B1041 -116.591 -83.837 -24.301 1.00 91.47 C
ATOM 7 C4' G B1041 -116.445 -84.130 -22.820 1.00 86.04 C
ATOM 8 O4' G B1041 -116.509 -85.563 -22.667 1.00 85.91 O
ATOM 9 C3' G B1041 -115.123 -83.684 -22.191 1.00 90.58 C
ATOM 10 O3' G B1041 -115.280 -82.492 -21.345 1.00 80.55 O
ATOM 11 C2' G B1041 -114.479 -84.943 -21.575 1.00 87.91 C
ATOM 12 O2' G B1041 -114.013 -84.780 -20.242 1.00 78.63 O
ATOM 13 C1' G B1041 -115.589 -85.991 -21.684 1.00 89.35 C
ATOM 14 N9 G B1041 -115.169 -87.325 -22.098 1.00 81.57 N
ATOM 15 C8 G B1041 -114.081 -87.689 -22.854 1.00 76.36 C
ATOM 16 N7 G B1041 -114.009 -88.982 -23.043 1.00 85.84 N
ATOM 17 C5 G B1041 -115.122 -89.509 -22.385 1.00 87.63 C
ATOM 18 C6 G B1041 -115.586 -90.851 -22.244 1.00 83.09 C
ATOM 19 O6 G B1041 -115.099 -91.904 -22.683 1.00 78.08 O
ATOM 20 N1 G B1041 -116.754 -90.910 -21.490 1.00 78.25 N
ATOM 21 C2 G B1041 -117.396 -89.820 -20.950 1.00 82.60 C
ATOM 22 N2 G B1041 -118.509 -90.066 -20.253 1.00 95.53 N
ATOM 23 N3 G B1041 -116.984 -88.569 -21.075 1.00 81.55 N
ATOM 24 C4 G B1041 -115.843 -88.490 -21.802 1.00 85.69 C
ATOM 25 P U B1042 -115.801 -82.335 -19.834 1.00 83.39 P
ATOM 26 OP1 U B1042 -115.527 -80.936 -19.446 1.00 86.39 O
ATOM 27 OP2 U B1042 -115.278 -83.424 -18.979 1.00 76.91 O
ATOM 28 O5' U B1042 -117.384 -82.447 -20.002 1.00 80.64 O
TER
ATOM 2 P A A1040 -122.576 -83.285 -28.954 1.00114.97 P
ATOM 3 OP1 A A1040 -123.811 -82.653 -29.469 1.00113.59 O
ATOM 4 OP2 A A1040 -121.353 -83.268 -29.784 1.00105.80 O
ATOM 5 O5' A A1040 -122.239 -82.638 -27.528 1.00 97.01 O
ATOM 6 C5' A A1040 -121.077 -82.999 -26.815 1.00 92.69 C
ATOM 7 C4' A A1040 -120.759 -81.952 -25.772 1.00 92.20 C
ATOM 8 O4' A A1040 -121.659 -82.085 -24.636 1.00 92.76 O
ATOM 9 C3' A A1040 -119.366 -82.107 -25.189 1.00 86.95 C
ATOM 10 O3' A A1040 -118.405 -81.349 -25.916 1.00 83.74 O
ATOM 11 C2' A A1040 -119.593 -81.600 -23.771 1.00 94.02 C
ATOM 12 O2' A A1040 -119.812 -80.204 -23.742 1.00 96.57 O
ATOM 13 C1' A A1040 -120.894 -82.323 -23.473 1.00 94.65 C
ATOM 14 N9 A A1040 -120.759 -83.771 -23.355 1.00102.68 N
ATOM 15 C8 A A1040 -119.655 -84.565 -23.531 1.00 98.70 C
ATOM 16 N7 A A1040 -119.873 -85.847 -23.363 1.00 90.43 N
ATOM 17 C5 A A1040 -121.220 -85.898 -23.066 1.00 92.45 C
ATOM 18 C6 A A1040 -122.085 -86.969 -22.782 1.00 95.65 C
ATOM 19 N6 A A1040 -121.714 -88.251 -22.753 1.00 91.07 N
ATOM 20 N1 A A1040 -123.368 -86.658 -22.527 1.00107.86 N
ATOM 21 C2 A A1040 -123.748 -85.371 -22.559 1.00101.24 C
ATOM 22 N3 A A1040 -123.035 -84.280 -22.814 1.00 91.46 N
ATOM 23 C4 A A1040 -121.773 -84.629 -23.060 1.00 96.03 C
ATOM 24 P G A1041 -116.893 -81.886 -26.026 1.00 80.86 P
ATOM 25 OP1 G A1041 -116.033 -80.708 -26.291 1.00 86.03 O
ATOM 26 OP2 G A1041 -116.889 -83.035 -26.963 1.00 89.44 O
ATOM 27 O5' G A1041 -116.559 -82.446 -24.559 1.00 89.73 O
TER
ATOM 1 O3' A B1040 -118.405 -81.349 -25.916 1.00 83.74 O
ATOM 2 P G B1041 -116.893 -81.886 -26.026 1.00 80.86 P
ATOM 3 OP1 G B1041 -116.033 -80.708 -26.291 1.00 86.03 O
ATOM 4 OP2 G B1041 -116.889 -83.035 -26.963 1.00 89.44 O
ATOM 5 O5' G B1041 -116.559 -82.446 -24.559 1.00 89.73 O
ATOM 6 C5' G B1041 -116.591 -83.837 -24.301 1.00 91.47 C
ATOM 7 C4' G B1041 -116.445 -84.130 -22.820 1.00 86.04 C
ATOM 8 O4' G B1041 -116.509 -85.563 -22.667 1.00 85.91 O
ATOM 9 C3' G B1041 -115.123 -83.684 -22.191 1.00 90.58 C
ATOM 10 O3' G B1041 -115.280 -82.492 -21.345 1.00 80.55 O
ATOM 11 C2' G B1041 -114.479 -84.943 -21.575 1.00 87.91 C
ATOM 12 O2' G B1041 -114.013 -84.780 -20.242 1.00 78.63 O
ATOM 13 C1' G B1041 -115.589 -85.991 -21.684 1.00 89.35 C
ATOM 14 N9 G B1041 -115.169 -87.325 -22.098 1.00 81.57 N
ATOM 15 C8 G B1041 -114.081 -87.689 -22.854 1.00 76.36 C
ATOM 16 N7 G B1041 -114.009 -88.982 -23.043 1.00 85.84 N
ATOM 17 C5 G B1041 -115.122 -89.509 -22.385 1.00 87.63 C
ATOM 18 C6 G B1041 -115.586 -90.851 -22.244 1.00 83.09 C
ATOM 19 O6 G B1041 -115.099 -91.904 -22.683 1.00 78.08 O
ATOM 20 N1 G B1041 -116.754 -90.910 -21.490 1.00 78.25 N
ATOM 21 C2 G B1041 -117.396 -89.820 -20.950 1.00 82.60 C
ATOM 22 N2 G B1041 -118.509 -90.066 -20.253 1.00 95.53 N
ATOM 23 N3 G B1041 -116.984 -88.569 -21.075 1.00 81.55 N
ATOM 24 C4 G B1041 -115.843 -88.490 -21.802 1.00 85.69 C
ATOM 25 P U B1042 -115.801 -82.335 -19.834 1.00 83.39 P
ATOM 26 OP1 U B1042 -115.527 -80.936 -19.446 1.00 86.39 O
ATOM 27 OP2 U B1042 -115.278 -83.424 -18.979 1.00 76.91 O
ATOM 28 O5' U B1042 -117.384 -82.447 -20.002 1.00 80.64 O
TER
Atoms:
OP1: (-123.811,-82.653,-29.469)
OP2: (-121.353,-83.268,-29.784)
C3': (-119.366,-82.107,-25.189)
C1': (-120.894,-82.323,-23.473)
C5': (-121.077,-82.999,-26.815)
O4': (-121.659,-82.085,-24.636)
C8: (-119.655,-84.565,-23.531)
O2': (-119.812,-80.204,-23.742)
C6: (-122.085,-86.969,-22.782)
C5: (-121.220,-85.898,-23.066)
C4: (-121.773,-84.629,-23.060)
P: (-122.576,-83.285,-28.954)
C4': (-120.759,-81.952,-25.772)
C2': (-119.593,-81.600,-23.771)
C2: (-123.748,-85.371,-22.559)
N1: (-123.368,-86.658,-22.527)
N3: (-123.035,-84.280,-22.814)
N6: (-121.714,-88.251,-22.753)
N7: (-119.873,-85.847,-23.363)
N9: (-120.759,-83.771,-23.355)
O5': (-122.239,-82.638,-27.528)
O3': (-118.405,-81.349,-25.916)
OP2: (-121.353,-83.268,-29.784)
C3': (-119.366,-82.107,-25.189)
C1': (-120.894,-82.323,-23.473)
C5': (-121.077,-82.999,-26.815)
O4': (-121.659,-82.085,-24.636)
C8: (-119.655,-84.565,-23.531)
O2': (-119.812,-80.204,-23.742)
C6: (-122.085,-86.969,-22.782)
C5: (-121.220,-85.898,-23.066)
C4: (-121.773,-84.629,-23.060)
P: (-122.576,-83.285,-28.954)
C4': (-120.759,-81.952,-25.772)
C2': (-119.593,-81.600,-23.771)
C2: (-123.748,-85.371,-22.559)
N1: (-123.368,-86.658,-22.527)
N3: (-123.035,-84.280,-22.814)
N6: (-121.714,-88.251,-22.753)
N7: (-119.873,-85.847,-23.363)
N9: (-120.759,-83.771,-23.355)
O5': (-122.239,-82.638,-27.528)
O3': (-118.405,-81.349,-25.916)
OP1: (-116.033,-80.708,-26.291)
OP2: (-116.889,-83.035,-26.963)
C3': (-115.123,-83.684,-22.191)
C1': (-115.589,-85.991,-21.684)
C5': (-116.591,-83.837,-24.301)
O6: (-115.099,-91.904,-22.683)
O4': (-116.509,-85.563,-22.667)
C8: (-114.081,-87.689,-22.854)
C2: (-117.396,-89.820,-20.950)
C6: (-115.586,-90.851,-22.244)
C5: (-115.122,-89.509,-22.385)
C4: (-115.843,-88.490,-21.802)
P: (-116.893,-81.886,-26.026)
C4': (-116.445,-84.130,-22.820)
C2': (-114.479,-84.943,-21.575)
O2': (-114.013,-84.780,-20.242)
N1: (-116.754,-90.910,-21.490)
N2: (-118.509,-90.066,-20.253)
N3: (-116.984,-88.569,-21.075)
N7: (-114.009,-88.982,-23.043)
N9: (-115.169,-87.325,-22.098)
O5': (-116.559,-82.446,-24.559)
O3': (-115.280,-82.492,-21.345)
OP2: (-116.889,-83.035,-26.963)
C3': (-115.123,-83.684,-22.191)
C1': (-115.589,-85.991,-21.684)
C5': (-116.591,-83.837,-24.301)
O6: (-115.099,-91.904,-22.683)
O4': (-116.509,-85.563,-22.667)
C8: (-114.081,-87.689,-22.854)
C2: (-117.396,-89.820,-20.950)
C6: (-115.586,-90.851,-22.244)
C5: (-115.122,-89.509,-22.385)
C4: (-115.843,-88.490,-21.802)
P: (-116.893,-81.886,-26.026)
C4': (-116.445,-84.130,-22.820)
C2': (-114.479,-84.943,-21.575)
O2': (-114.013,-84.780,-20.242)
N1: (-116.754,-90.910,-21.490)
N2: (-118.509,-90.066,-20.253)
N3: (-116.984,-88.569,-21.075)
N7: (-114.009,-88.982,-23.043)
N9: (-115.169,-87.325,-22.098)
O5': (-116.559,-82.446,-24.559)
O3': (-115.280,-82.492,-21.345)
Image (generated by PyMOL):