Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GAO:A35:A34
Extra
PDB:
ATOM 1 O3' U A 34 4.734 18.070 4.169 1.00 31.23 O
ATOM 2 P C A 35 6.044 18.965 4.429 1.00 33.97 P
ATOM 3 OP1 C A 35 5.981 20.164 3.557 1.00 32.77 O
ATOM 4 OP2 C A 35 7.256 18.107 4.405 1.00 32.39 O
ATOM 5 O5' C A 35 5.835 19.450 5.930 1.00 31.43 O
ATOM 6 C5' C A 35 4.695 20.224 6.293 1.00 30.36 C
ATOM 7 C4' C A 35 4.357 19.995 7.744 1.00 29.79 C
ATOM 8 O4' C A 35 3.828 18.655 7.920 1.00 29.52 O
ATOM 9 C3' C A 35 5.545 20.062 8.688 1.00 30.35 C
ATOM 10 O3' C A 35 5.813 21.407 9.058 1.00 31.33 O
ATOM 11 C2' C A 35 5.067 19.229 9.870 1.00 30.21 C
ATOM 12 O2' C A 35 4.220 19.948 10.743 1.00 31.36 O
ATOM 13 C1' C A 35 4.262 18.134 9.166 1.00 29.48 C
ATOM 14 N1 C A 35 5.025 16.905 8.907 1.00 29.00 N
ATOM 15 C2 C A 35 5.503 16.164 9.992 1.00 28.67 C
ATOM 16 O2 C A 35 5.290 16.577 11.142 1.00 28.77 O
ATOM 17 N3 C A 35 6.183 15.017 9.761 1.00 28.84 N
ATOM 18 C4 C A 35 6.390 14.605 8.508 1.00 28.40 C
ATOM 19 N4 C A 35 7.048 13.458 8.328 1.00 26.52 N
ATOM 20 C5 C A 35 5.926 15.349 7.384 1.00 29.23 C
ATOM 21 C6 C A 35 5.255 16.483 7.627 1.00 29.70 C
ATOM 22 P U A 36 7.308 21.981 8.937 1.00 32.34 P
ATOM 23 OP1 U A 36 7.322 23.371 9.456 1.00 33.02 O
ATOM 24 OP2 U A 36 7.785 21.710 7.556 1.00 33.41 O
ATOM 25 O5' U A 36 8.150 21.063 9.931 1.00 31.61 O
TER
ATOM 1 O3' U B 33 3.025 16.093 -1.746 1.00 31.31 O
ATOM 2 P U B 34 4.344 16.585 -0.971 1.00 31.53 P
ATOM 3 OP1 U B 34 4.239 18.063 -1.048 1.00 30.22 O
ATOM 4 OP2 U B 34 5.553 15.907 -1.508 1.00 30.72 O
ATOM 5 O5' U B 34 4.122 16.142 0.546 1.00 31.12 O
ATOM 6 C5' U B 34 3.040 16.675 1.296 1.00 30.50 C
ATOM 7 C4' U B 34 3.309 16.605 2.786 1.00 29.34 C
ATOM 8 O4' U B 34 3.232 15.224 3.237 1.00 29.57 O
ATOM 9 C3' U B 34 4.721 17.080 3.142 1.00 29.24 C
ATOM 10 O3' U B 34 4.734 18.070 4.169 1.00 31.23 O
ATOM 11 C2' U B 34 5.564 15.816 3.336 1.00 28.32 C
ATOM 12 O2' U B 34 6.445 15.898 4.437 1.00 27.60 O
ATOM 13 C1' U B 34 4.490 14.801 3.713 1.00 27.97 C
ATOM 14 N1 U B 34 4.682 13.363 3.486 1.00 27.07 N
ATOM 15 C2 U B 34 4.460 12.548 4.579 1.00 24.97 C
ATOM 16 O2 U B 34 4.113 12.984 5.661 1.00 25.01 O
ATOM 17 N3 U B 34 4.655 11.211 4.363 1.00 26.09 N
ATOM 18 C4 U B 34 5.045 10.612 3.188 1.00 27.00 C
ATOM 19 O4 U B 34 5.178 9.387 3.153 1.00 26.33 O
ATOM 20 C5 U B 34 5.256 11.518 2.096 1.00 27.71 C
ATOM 21 C6 U B 34 5.069 12.835 2.279 1.00 27.98 C
ATOM 22 P C B 35 6.044 18.965 4.429 1.00 33.97 P
ATOM 23 OP1 C B 35 5.981 20.164 3.557 1.00 32.77 O
ATOM 24 OP2 C B 35 7.256 18.107 4.405 1.00 32.39 O
ATOM 25 O5' C B 35 5.835 19.450 5.930 1.00 31.43 O
TER
ATOM 2 P C A 35 6.044 18.965 4.429 1.00 33.97 P
ATOM 3 OP1 C A 35 5.981 20.164 3.557 1.00 32.77 O
ATOM 4 OP2 C A 35 7.256 18.107 4.405 1.00 32.39 O
ATOM 5 O5' C A 35 5.835 19.450 5.930 1.00 31.43 O
ATOM 6 C5' C A 35 4.695 20.224 6.293 1.00 30.36 C
ATOM 7 C4' C A 35 4.357 19.995 7.744 1.00 29.79 C
ATOM 8 O4' C A 35 3.828 18.655 7.920 1.00 29.52 O
ATOM 9 C3' C A 35 5.545 20.062 8.688 1.00 30.35 C
ATOM 10 O3' C A 35 5.813 21.407 9.058 1.00 31.33 O
ATOM 11 C2' C A 35 5.067 19.229 9.870 1.00 30.21 C
ATOM 12 O2' C A 35 4.220 19.948 10.743 1.00 31.36 O
ATOM 13 C1' C A 35 4.262 18.134 9.166 1.00 29.48 C
ATOM 14 N1 C A 35 5.025 16.905 8.907 1.00 29.00 N
ATOM 15 C2 C A 35 5.503 16.164 9.992 1.00 28.67 C
ATOM 16 O2 C A 35 5.290 16.577 11.142 1.00 28.77 O
ATOM 17 N3 C A 35 6.183 15.017 9.761 1.00 28.84 N
ATOM 18 C4 C A 35 6.390 14.605 8.508 1.00 28.40 C
ATOM 19 N4 C A 35 7.048 13.458 8.328 1.00 26.52 N
ATOM 20 C5 C A 35 5.926 15.349 7.384 1.00 29.23 C
ATOM 21 C6 C A 35 5.255 16.483 7.627 1.00 29.70 C
ATOM 22 P U A 36 7.308 21.981 8.937 1.00 32.34 P
ATOM 23 OP1 U A 36 7.322 23.371 9.456 1.00 33.02 O
ATOM 24 OP2 U A 36 7.785 21.710 7.556 1.00 33.41 O
ATOM 25 O5' U A 36 8.150 21.063 9.931 1.00 31.61 O
TER
ATOM 1 O3' U B 33 3.025 16.093 -1.746 1.00 31.31 O
ATOM 2 P U B 34 4.344 16.585 -0.971 1.00 31.53 P
ATOM 3 OP1 U B 34 4.239 18.063 -1.048 1.00 30.22 O
ATOM 4 OP2 U B 34 5.553 15.907 -1.508 1.00 30.72 O
ATOM 5 O5' U B 34 4.122 16.142 0.546 1.00 31.12 O
ATOM 6 C5' U B 34 3.040 16.675 1.296 1.00 30.50 C
ATOM 7 C4' U B 34 3.309 16.605 2.786 1.00 29.34 C
ATOM 8 O4' U B 34 3.232 15.224 3.237 1.00 29.57 O
ATOM 9 C3' U B 34 4.721 17.080 3.142 1.00 29.24 C
ATOM 10 O3' U B 34 4.734 18.070 4.169 1.00 31.23 O
ATOM 11 C2' U B 34 5.564 15.816 3.336 1.00 28.32 C
ATOM 12 O2' U B 34 6.445 15.898 4.437 1.00 27.60 O
ATOM 13 C1' U B 34 4.490 14.801 3.713 1.00 27.97 C
ATOM 14 N1 U B 34 4.682 13.363 3.486 1.00 27.07 N
ATOM 15 C2 U B 34 4.460 12.548 4.579 1.00 24.97 C
ATOM 16 O2 U B 34 4.113 12.984 5.661 1.00 25.01 O
ATOM 17 N3 U B 34 4.655 11.211 4.363 1.00 26.09 N
ATOM 18 C4 U B 34 5.045 10.612 3.188 1.00 27.00 C
ATOM 19 O4 U B 34 5.178 9.387 3.153 1.00 26.33 O
ATOM 20 C5 U B 34 5.256 11.518 2.096 1.00 27.71 C
ATOM 21 C6 U B 34 5.069 12.835 2.279 1.00 27.98 C
ATOM 22 P C B 35 6.044 18.965 4.429 1.00 33.97 P
ATOM 23 OP1 C B 35 5.981 20.164 3.557 1.00 32.77 O
ATOM 24 OP2 C B 35 7.256 18.107 4.405 1.00 32.39 O
ATOM 25 O5' C B 35 5.835 19.450 5.930 1.00 31.43 O
TER
Atoms:
C2: (5.503,16.164,9.992)
OP1: (5.981,20.164,3.557)
OP2: (7.256,18.107,4.405)
C4: (6.390,14.605,8.508)
O5': (5.835,19.450,5.930)
C3': (5.545,20.062,8.688)
C1': (4.262,18.134,9.166)
O4': (3.828,18.655,7.920)
C5': (4.695,20.224,6.293)
P: (6.044,18.965,4.429)
O2: (5.290,16.577,11.142)
C4': (4.357,19.995,7.744)
C2': (5.067,19.229,9.870)
O2': (4.220,19.948,10.743)
N1: (5.025,16.905,8.907)
N3: (6.183,15.017,9.761)
N4: (7.048,13.458,8.328)
C6: (5.255,16.483,7.627)
C5: (5.926,15.349,7.384)
O3': (5.813,21.407,9.058)
OP1: (5.981,20.164,3.557)
OP2: (7.256,18.107,4.405)
C4: (6.390,14.605,8.508)
O5': (5.835,19.450,5.930)
C3': (5.545,20.062,8.688)
C1': (4.262,18.134,9.166)
O4': (3.828,18.655,7.920)
C5': (4.695,20.224,6.293)
P: (6.044,18.965,4.429)
O2: (5.290,16.577,11.142)
C4': (4.357,19.995,7.744)
C2': (5.067,19.229,9.870)
O2': (4.220,19.948,10.743)
N1: (5.025,16.905,8.907)
N3: (6.183,15.017,9.761)
N4: (7.048,13.458,8.328)
C6: (5.255,16.483,7.627)
C5: (5.926,15.349,7.384)
O3': (5.813,21.407,9.058)
C4: (5.045,10.612,3.188)
N3: (4.655,11.211,4.363)
OP1: (4.239,18.063,-1.048)
OP2: (5.553,15.907,-1.508)
C2: (4.460,12.548,4.579)
C1': (4.490,14.801,3.713)
C3': (4.721,17.080,3.142)
O5': (4.122,16.142,0.546)
O4': (3.232,15.224,3.237)
C5': (3.040,16.675,1.296)
P: (4.344,16.585,-0.971)
C4': (3.309,16.605,2.786)
C2': (5.564,15.816,3.336)
O2': (6.445,15.898,4.437)
N1: (4.682,13.363,3.486)
O4: (5.178,9.387,3.153)
O2: (4.113,12.984,5.661)
C6: (5.069,12.835,2.279)
C5: (5.256,11.518,2.096)
O3': (4.734,18.070,4.169)
N3: (4.655,11.211,4.363)
OP1: (4.239,18.063,-1.048)
OP2: (5.553,15.907,-1.508)
C2: (4.460,12.548,4.579)
C1': (4.490,14.801,3.713)
C3': (4.721,17.080,3.142)
O5': (4.122,16.142,0.546)
O4': (3.232,15.224,3.237)
C5': (3.040,16.675,1.296)
P: (4.344,16.585,-0.971)
C4': (3.309,16.605,2.786)
C2': (5.564,15.816,3.336)
O2': (6.445,15.898,4.437)
N1: (4.682,13.363,3.486)
O4: (5.178,9.387,3.153)
O2: (4.113,12.984,5.661)
C6: (5.069,12.835,2.279)
C5: (5.256,11.518,2.096)
O3': (4.734,18.070,4.169)
Image (generated by PyMOL):