Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A35:A34
Extra
PDB:
ATOM 1 O3' U A 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 2 P C A 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 3 OP1 C A 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 4 OP2 C A 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 5 O5' C A 35 5.896 19.289 5.792 1.00 34.48 O
ATOM 6 C5' C A 35 4.717 19.993 6.175 1.00 33.87 C
ATOM 7 C4' C A 35 4.450 19.790 7.645 1.00 33.30 C
ATOM 8 O4' C A 35 3.902 18.460 7.849 1.00 32.75 O
ATOM 9 C3' C A 35 5.683 19.833 8.533 1.00 33.59 C
ATOM 10 O3' C A 35 5.983 21.174 8.909 1.00 34.41 O
ATOM 11 C2' C A 35 5.239 19.007 9.733 1.00 32.94 C
ATOM 12 O2' C A 35 4.432 19.738 10.631 1.00 33.35 O
ATOM 13 C1' C A 35 4.399 17.920 9.060 1.00 32.29 C
ATOM 14 N1 C A 35 5.156 16.697 8.749 1.00 30.92 N
ATOM 15 C2 C A 35 5.633 15.918 9.805 1.00 30.44 C
ATOM 16 O2 C A 35 5.411 16.285 10.965 1.00 30.29 O
ATOM 17 N3 C A 35 6.323 14.785 9.536 1.00 30.11 N
ATOM 18 C4 C A 35 6.540 14.422 8.270 1.00 29.90 C
ATOM 19 N4 C A 35 7.221 13.296 8.052 1.00 29.31 N
ATOM 20 C5 C A 35 6.066 15.199 7.171 1.00 30.22 C
ATOM 21 C6 C A 35 5.386 16.320 7.455 1.00 30.82 C
ATOM 22 P U A 36 7.499 21.704 8.829 1.00 36.25 P
ATOM 23 OP1 U A 36 7.539 23.083 9.376 1.00 36.18 O
ATOM 24 OP2 U A 36 8.005 21.445 7.457 1.00 35.49 O
ATOM 25 O5' U A 36 8.288 20.751 9.830 1.00 34.89 O
TER
ATOM 1 O3' U B 33 3.091 15.875 -1.813 1.00 35.28 O
ATOM 2 P U B 34 4.379 16.620 -1.198 1.00 35.33 P
ATOM 3 OP1 U B 34 4.099 18.076 -1.256 1.00 34.88 O
ATOM 4 OP2 U B 34 5.592 16.079 -1.863 1.00 35.03 O
ATOM 5 O5' U B 34 4.419 16.180 0.336 1.00 33.92 O
ATOM 6 C5' U B 34 3.231 16.147 1.125 1.00 33.76 C
ATOM 7 C4' U B 34 3.538 16.447 2.578 1.00 32.15 C
ATOM 8 O4' U B 34 3.423 15.216 3.344 1.00 31.97 O
ATOM 9 C3' U B 34 4.952 16.953 2.856 1.00 32.73 C
ATOM 10 O3' U B 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 11 C2' U B 34 5.738 15.659 3.048 1.00 31.84 C
ATOM 12 O2' U B 34 6.877 15.798 3.875 1.00 31.75 O
ATOM 13 C1' U B 34 4.707 14.794 3.765 1.00 30.92 C
ATOM 14 N1 U B 34 4.844 13.344 3.562 1.00 29.14 N
ATOM 15 C2 U B 34 4.533 12.530 4.632 1.00 28.30 C
ATOM 16 O2 U B 34 4.133 12.966 5.697 1.00 28.80 O
ATOM 17 N3 U B 34 4.706 11.189 4.410 1.00 27.58 N
ATOM 18 C4 U B 34 5.143 10.589 3.249 1.00 27.44 C
ATOM 19 O4 U B 34 5.246 9.362 3.206 1.00 27.28 O
ATOM 20 C5 U B 34 5.435 11.498 2.181 1.00 27.45 C
ATOM 21 C6 U B 34 5.276 12.813 2.369 1.00 28.06 C
ATOM 22 P C B 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 23 OP1 C B 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 24 OP2 C B 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 25 O5' C B 35 5.896 19.289 5.792 1.00 34.48 O
TER
ATOM 2 P C A 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 3 OP1 C A 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 4 OP2 C A 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 5 O5' C A 35 5.896 19.289 5.792 1.00 34.48 O
ATOM 6 C5' C A 35 4.717 19.993 6.175 1.00 33.87 C
ATOM 7 C4' C A 35 4.450 19.790 7.645 1.00 33.30 C
ATOM 8 O4' C A 35 3.902 18.460 7.849 1.00 32.75 O
ATOM 9 C3' C A 35 5.683 19.833 8.533 1.00 33.59 C
ATOM 10 O3' C A 35 5.983 21.174 8.909 1.00 34.41 O
ATOM 11 C2' C A 35 5.239 19.007 9.733 1.00 32.94 C
ATOM 12 O2' C A 35 4.432 19.738 10.631 1.00 33.35 O
ATOM 13 C1' C A 35 4.399 17.920 9.060 1.00 32.29 C
ATOM 14 N1 C A 35 5.156 16.697 8.749 1.00 30.92 N
ATOM 15 C2 C A 35 5.633 15.918 9.805 1.00 30.44 C
ATOM 16 O2 C A 35 5.411 16.285 10.965 1.00 30.29 O
ATOM 17 N3 C A 35 6.323 14.785 9.536 1.00 30.11 N
ATOM 18 C4 C A 35 6.540 14.422 8.270 1.00 29.90 C
ATOM 19 N4 C A 35 7.221 13.296 8.052 1.00 29.31 N
ATOM 20 C5 C A 35 6.066 15.199 7.171 1.00 30.22 C
ATOM 21 C6 C A 35 5.386 16.320 7.455 1.00 30.82 C
ATOM 22 P U A 36 7.499 21.704 8.829 1.00 36.25 P
ATOM 23 OP1 U A 36 7.539 23.083 9.376 1.00 36.18 O
ATOM 24 OP2 U A 36 8.005 21.445 7.457 1.00 35.49 O
ATOM 25 O5' U A 36 8.288 20.751 9.830 1.00 34.89 O
TER
ATOM 1 O3' U B 33 3.091 15.875 -1.813 1.00 35.28 O
ATOM 2 P U B 34 4.379 16.620 -1.198 1.00 35.33 P
ATOM 3 OP1 U B 34 4.099 18.076 -1.256 1.00 34.88 O
ATOM 4 OP2 U B 34 5.592 16.079 -1.863 1.00 35.03 O
ATOM 5 O5' U B 34 4.419 16.180 0.336 1.00 33.92 O
ATOM 6 C5' U B 34 3.231 16.147 1.125 1.00 33.76 C
ATOM 7 C4' U B 34 3.538 16.447 2.578 1.00 32.15 C
ATOM 8 O4' U B 34 3.423 15.216 3.344 1.00 31.97 O
ATOM 9 C3' U B 34 4.952 16.953 2.856 1.00 32.73 C
ATOM 10 O3' U B 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 11 C2' U B 34 5.738 15.659 3.048 1.00 31.84 C
ATOM 12 O2' U B 34 6.877 15.798 3.875 1.00 31.75 O
ATOM 13 C1' U B 34 4.707 14.794 3.765 1.00 30.92 C
ATOM 14 N1 U B 34 4.844 13.344 3.562 1.00 29.14 N
ATOM 15 C2 U B 34 4.533 12.530 4.632 1.00 28.30 C
ATOM 16 O2 U B 34 4.133 12.966 5.697 1.00 28.80 O
ATOM 17 N3 U B 34 4.706 11.189 4.410 1.00 27.58 N
ATOM 18 C4 U B 34 5.143 10.589 3.249 1.00 27.44 C
ATOM 19 O4 U B 34 5.246 9.362 3.206 1.00 27.28 O
ATOM 20 C5 U B 34 5.435 11.498 2.181 1.00 27.45 C
ATOM 21 C6 U B 34 5.276 12.813 2.369 1.00 28.06 C
ATOM 22 P C B 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 23 OP1 C B 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 24 OP2 C B 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 25 O5' C B 35 5.896 19.289 5.792 1.00 34.48 O
TER
Atoms:
C2: (5.633,15.918,9.805)
OP1: (5.848,19.990,3.404)
OP2: (7.425,18.130,4.208)
C4: (6.540,14.422,8.270)
O5': (5.896,19.289,5.792)
C3': (5.683,19.833,8.533)
C1': (4.399,17.920,9.060)
O4': (3.902,18.460,7.849)
C5': (4.717,19.993,6.175)
P: (6.113,18.825,4.286)
O2: (5.411,16.285,10.965)
C4': (4.450,19.790,7.645)
C2': (5.239,19.007,9.733)
O2': (4.432,19.738,10.631)
N1: (5.156,16.697,8.749)
N3: (6.323,14.785,9.536)
N4: (7.221,13.296,8.052)
C6: (5.386,16.320,7.455)
C5: (6.066,15.199,7.171)
O3': (5.983,21.174,8.909)
OP1: (5.848,19.990,3.404)
OP2: (7.425,18.130,4.208)
C4: (6.540,14.422,8.270)
O5': (5.896,19.289,5.792)
C3': (5.683,19.833,8.533)
C1': (4.399,17.920,9.060)
O4': (3.902,18.460,7.849)
C5': (4.717,19.993,6.175)
P: (6.113,18.825,4.286)
O2: (5.411,16.285,10.965)
C4': (4.450,19.790,7.645)
C2': (5.239,19.007,9.733)
O2': (4.432,19.738,10.631)
N1: (5.156,16.697,8.749)
N3: (6.323,14.785,9.536)
N4: (7.221,13.296,8.052)
C6: (5.386,16.320,7.455)
C5: (6.066,15.199,7.171)
O3': (5.983,21.174,8.909)
C4: (5.143,10.589,3.249)
N3: (4.706,11.189,4.410)
OP1: (4.099,18.076,-1.256)
OP2: (5.592,16.079,-1.863)
C2: (4.533,12.530,4.632)
C1': (4.707,14.794,3.765)
C3': (4.952,16.953,2.856)
O5': (4.419,16.180,0.336)
O4': (3.423,15.216,3.344)
C5': (3.231,16.147,1.125)
P: (4.379,16.620,-1.198)
C4': (3.538,16.447,2.578)
C2': (5.738,15.659,3.048)
O2': (6.877,15.798,3.875)
N1: (4.844,13.344,3.562)
O4: (5.246,9.362,3.206)
O2: (4.133,12.966,5.697)
C6: (5.276,12.813,2.369)
C5: (5.435,11.498,2.181)
O3': (4.963,17.727,4.053)
N3: (4.706,11.189,4.410)
OP1: (4.099,18.076,-1.256)
OP2: (5.592,16.079,-1.863)
C2: (4.533,12.530,4.632)
C1': (4.707,14.794,3.765)
C3': (4.952,16.953,2.856)
O5': (4.419,16.180,0.336)
O4': (3.423,15.216,3.344)
C5': (3.231,16.147,1.125)
P: (4.379,16.620,-1.198)
C4': (3.538,16.447,2.578)
C2': (5.738,15.659,3.048)
O2': (6.877,15.798,3.875)
N1: (4.844,13.344,3.562)
O4: (5.246,9.362,3.206)
O2: (4.133,12.966,5.697)
C6: (5.276,12.813,2.369)
C5: (5.435,11.498,2.181)
O3': (4.963,17.727,4.053)
Image (generated by PyMOL):