Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOG:A34:A33
Extra
PDB:
ATOM 1 O3' U A 33 5.093 19.938 4.175 1.00 44.43 O
ATOM 2 P C A 34 6.351 20.889 4.519 1.00 45.25 P
ATOM 3 OP1 C A 34 6.286 22.104 3.656 1.00 45.46 O
ATOM 4 OP2 C A 34 7.612 20.097 4.567 1.00 44.27 O
ATOM 5 O5' C A 34 6.040 21.351 6.011 1.00 45.51 O
ATOM 6 C5' C A 34 4.989 22.277 6.280 1.00 45.26 C
ATOM 7 C4' C A 34 4.599 22.195 7.733 1.00 45.08 C
ATOM 8 O4' C A 34 3.889 20.947 7.946 1.00 45.53 O
ATOM 9 C3' C A 34 5.766 22.129 8.703 1.00 45.17 C
ATOM 10 O3' C A 34 6.194 23.431 9.068 1.00 45.39 O
ATOM 11 C2' C A 34 5.147 21.426 9.897 1.00 45.07 C
ATOM 12 O2' C A 34 4.339 22.297 10.660 1.00 44.93 O
ATOM 13 C1' C A 34 4.271 20.386 9.200 1.00 45.08 C
ATOM 14 N1 C A 34 4.990 19.132 8.940 1.00 43.88 N
ATOM 15 C2 C A 34 5.507 18.420 10.024 1.00 44.05 C
ATOM 16 O2 C A 34 5.363 18.900 11.174 1.00 43.36 O
ATOM 17 N3 C A 34 6.149 17.235 9.800 1.00 43.69 N
ATOM 18 C4 C A 34 6.276 16.777 8.540 1.00 44.18 C
ATOM 19 N4 C A 34 6.899 15.595 8.342 1.00 43.30 N
ATOM 20 C5 C A 34 5.767 17.503 7.420 1.00 44.35 C
ATOM 21 C6 C A 34 5.141 18.664 7.665 1.00 44.36 C
ATOM 22 P U A 35 7.764 23.763 9.096 1.00 46.24 P
ATOM 23 OP1 U A 35 7.970 25.061 9.804 1.00 46.72 O
ATOM 24 OP2 U A 35 8.267 23.591 7.701 1.00 46.67 O
ATOM 25 O5' U A 35 8.379 22.605 10.003 1.00 45.92 O
TER
ATOM 1 O3' U B 32 3.181 18.232 -1.705 1.00 47.83 O
ATOM 2 P U B 33 4.528 18.885 -1.115 1.00 47.03 P
ATOM 3 OP1 U B 33 4.323 20.350 -1.201 1.00 46.84 O
ATOM 4 OP2 U B 33 5.691 18.265 -1.796 1.00 47.14 O
ATOM 5 O5' U B 33 4.571 18.477 0.426 1.00 45.77 O
ATOM 6 C5' U B 33 3.381 18.415 1.205 1.00 44.42 C
ATOM 7 C4' U B 33 3.668 18.712 2.663 1.00 43.47 C
ATOM 8 O4' U B 33 3.472 17.491 3.433 1.00 42.76 O
ATOM 9 C3' U B 33 5.094 19.158 2.986 1.00 43.38 C
ATOM 10 O3' U B 33 5.093 19.938 4.175 1.00 44.43 O
ATOM 11 C2' U B 33 5.814 17.830 3.212 1.00 42.92 C
ATOM 12 O2' U B 33 6.927 17.904 4.084 1.00 42.51 O
ATOM 13 C1' U B 33 4.720 17.005 3.886 1.00 42.15 C
ATOM 14 N1 U B 33 4.813 15.560 3.634 1.00 40.66 N
ATOM 15 C2 U B 33 4.496 14.714 4.673 1.00 39.46 C
ATOM 16 O2 U B 33 4.107 15.114 5.747 1.00 39.88 O
ATOM 17 N3 U B 33 4.650 13.379 4.404 1.00 38.83 N
ATOM 18 C4 U B 33 5.073 12.816 3.220 1.00 39.95 C
ATOM 19 O4 U B 33 5.214 11.592 3.144 1.00 39.48 O
ATOM 20 C5 U B 33 5.361 13.759 2.182 1.00 39.90 C
ATOM 21 C6 U B 33 5.222 15.067 2.420 1.00 40.53 C
ATOM 22 P C B 34 6.351 20.889 4.519 1.00 45.25 P
ATOM 23 OP1 C B 34 6.286 22.104 3.656 1.00 45.46 O
ATOM 24 OP2 C B 34 7.612 20.097 4.567 1.00 44.27 O
ATOM 25 O5' C B 34 6.040 21.351 6.011 1.00 45.51 O
TER
ATOM 2 P C A 34 6.351 20.889 4.519 1.00 45.25 P
ATOM 3 OP1 C A 34 6.286 22.104 3.656 1.00 45.46 O
ATOM 4 OP2 C A 34 7.612 20.097 4.567 1.00 44.27 O
ATOM 5 O5' C A 34 6.040 21.351 6.011 1.00 45.51 O
ATOM 6 C5' C A 34 4.989 22.277 6.280 1.00 45.26 C
ATOM 7 C4' C A 34 4.599 22.195 7.733 1.00 45.08 C
ATOM 8 O4' C A 34 3.889 20.947 7.946 1.00 45.53 O
ATOM 9 C3' C A 34 5.766 22.129 8.703 1.00 45.17 C
ATOM 10 O3' C A 34 6.194 23.431 9.068 1.00 45.39 O
ATOM 11 C2' C A 34 5.147 21.426 9.897 1.00 45.07 C
ATOM 12 O2' C A 34 4.339 22.297 10.660 1.00 44.93 O
ATOM 13 C1' C A 34 4.271 20.386 9.200 1.00 45.08 C
ATOM 14 N1 C A 34 4.990 19.132 8.940 1.00 43.88 N
ATOM 15 C2 C A 34 5.507 18.420 10.024 1.00 44.05 C
ATOM 16 O2 C A 34 5.363 18.900 11.174 1.00 43.36 O
ATOM 17 N3 C A 34 6.149 17.235 9.800 1.00 43.69 N
ATOM 18 C4 C A 34 6.276 16.777 8.540 1.00 44.18 C
ATOM 19 N4 C A 34 6.899 15.595 8.342 1.00 43.30 N
ATOM 20 C5 C A 34 5.767 17.503 7.420 1.00 44.35 C
ATOM 21 C6 C A 34 5.141 18.664 7.665 1.00 44.36 C
ATOM 22 P U A 35 7.764 23.763 9.096 1.00 46.24 P
ATOM 23 OP1 U A 35 7.970 25.061 9.804 1.00 46.72 O
ATOM 24 OP2 U A 35 8.267 23.591 7.701 1.00 46.67 O
ATOM 25 O5' U A 35 8.379 22.605 10.003 1.00 45.92 O
TER
ATOM 1 O3' U B 32 3.181 18.232 -1.705 1.00 47.83 O
ATOM 2 P U B 33 4.528 18.885 -1.115 1.00 47.03 P
ATOM 3 OP1 U B 33 4.323 20.350 -1.201 1.00 46.84 O
ATOM 4 OP2 U B 33 5.691 18.265 -1.796 1.00 47.14 O
ATOM 5 O5' U B 33 4.571 18.477 0.426 1.00 45.77 O
ATOM 6 C5' U B 33 3.381 18.415 1.205 1.00 44.42 C
ATOM 7 C4' U B 33 3.668 18.712 2.663 1.00 43.47 C
ATOM 8 O4' U B 33 3.472 17.491 3.433 1.00 42.76 O
ATOM 9 C3' U B 33 5.094 19.158 2.986 1.00 43.38 C
ATOM 10 O3' U B 33 5.093 19.938 4.175 1.00 44.43 O
ATOM 11 C2' U B 33 5.814 17.830 3.212 1.00 42.92 C
ATOM 12 O2' U B 33 6.927 17.904 4.084 1.00 42.51 O
ATOM 13 C1' U B 33 4.720 17.005 3.886 1.00 42.15 C
ATOM 14 N1 U B 33 4.813 15.560 3.634 1.00 40.66 N
ATOM 15 C2 U B 33 4.496 14.714 4.673 1.00 39.46 C
ATOM 16 O2 U B 33 4.107 15.114 5.747 1.00 39.88 O
ATOM 17 N3 U B 33 4.650 13.379 4.404 1.00 38.83 N
ATOM 18 C4 U B 33 5.073 12.816 3.220 1.00 39.95 C
ATOM 19 O4 U B 33 5.214 11.592 3.144 1.00 39.48 O
ATOM 20 C5 U B 33 5.361 13.759 2.182 1.00 39.90 C
ATOM 21 C6 U B 33 5.222 15.067 2.420 1.00 40.53 C
ATOM 22 P C B 34 6.351 20.889 4.519 1.00 45.25 P
ATOM 23 OP1 C B 34 6.286 22.104 3.656 1.00 45.46 O
ATOM 24 OP2 C B 34 7.612 20.097 4.567 1.00 44.27 O
ATOM 25 O5' C B 34 6.040 21.351 6.011 1.00 45.51 O
TER
Atoms:
C2: (5.507,18.420,10.024)
OP1: (6.286,22.104,3.656)
OP2: (7.612,20.097,4.567)
C4: (6.276,16.777,8.540)
O5': (6.040,21.351,6.011)
C3': (5.766,22.129,8.703)
C1': (4.271,20.386,9.200)
O4': (3.889,20.947,7.946)
C5': (4.989,22.277,6.280)
P: (6.351,20.889,4.519)
O2: (5.363,18.900,11.174)
C4': (4.599,22.195,7.733)
C2': (5.147,21.426,9.897)
O2': (4.339,22.297,10.660)
N1: (4.990,19.132,8.940)
N3: (6.149,17.235,9.800)
N4: (6.899,15.595,8.342)
C6: (5.141,18.664,7.665)
C5: (5.767,17.503,7.420)
O3': (6.194,23.431,9.068)
OP1: (6.286,22.104,3.656)
OP2: (7.612,20.097,4.567)
C4: (6.276,16.777,8.540)
O5': (6.040,21.351,6.011)
C3': (5.766,22.129,8.703)
C1': (4.271,20.386,9.200)
O4': (3.889,20.947,7.946)
C5': (4.989,22.277,6.280)
P: (6.351,20.889,4.519)
O2: (5.363,18.900,11.174)
C4': (4.599,22.195,7.733)
C2': (5.147,21.426,9.897)
O2': (4.339,22.297,10.660)
N1: (4.990,19.132,8.940)
N3: (6.149,17.235,9.800)
N4: (6.899,15.595,8.342)
C6: (5.141,18.664,7.665)
C5: (5.767,17.503,7.420)
O3': (6.194,23.431,9.068)
C4: (5.073,12.816,3.220)
N3: (4.650,13.379,4.404)
OP1: (4.323,20.350,-1.201)
OP2: (5.691,18.265,-1.796)
C2: (4.496,14.714,4.673)
C1': (4.720,17.005,3.886)
C3': (5.094,19.158,2.986)
O5': (4.571,18.477,0.426)
O4': (3.472,17.491,3.433)
C5': (3.381,18.415,1.205)
P: (4.528,18.885,-1.115)
C4': (3.668,18.712,2.663)
C2': (5.814,17.830,3.212)
O2': (6.927,17.904,4.084)
N1: (4.813,15.560,3.634)
O4: (5.214,11.592,3.144)
O2: (4.107,15.114,5.747)
C6: (5.222,15.067,2.420)
C5: (5.361,13.759,2.182)
O3': (5.093,19.938,4.175)
N3: (4.650,13.379,4.404)
OP1: (4.323,20.350,-1.201)
OP2: (5.691,18.265,-1.796)
C2: (4.496,14.714,4.673)
C1': (4.720,17.005,3.886)
C3': (5.094,19.158,2.986)
O5': (4.571,18.477,0.426)
O4': (3.472,17.491,3.433)
C5': (3.381,18.415,1.205)
P: (4.528,18.885,-1.115)
C4': (3.668,18.712,2.663)
C2': (5.814,17.830,3.212)
O2': (6.927,17.904,4.084)
N1: (4.813,15.560,3.634)
O4: (5.214,11.592,3.144)
O2: (4.107,15.114,5.747)
C6: (5.222,15.067,2.420)
C5: (5.361,13.759,2.182)
O3': (5.093,19.938,4.175)
Image (generated by PyMOL):