Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A35:A34
Extra
PDB:
ATOM 1 O3' U A 34 -5.140 -16.870 4.162 1.00 46.59 O
ATOM 2 P C A 35 -6.330 -17.919 4.431 1.00 49.27 P
ATOM 3 OP1 C A 35 -6.163 -19.100 3.534 1.00 48.38 O
ATOM 4 OP2 C A 35 -7.620 -17.173 4.426 1.00 47.38 O
ATOM 5 O5' C A 35 -6.059 -18.396 5.918 1.00 47.63 O
ATOM 6 C5' C A 35 -4.834 -19.015 6.273 1.00 47.64 C
ATOM 7 C4' C A 35 -4.564 -18.797 7.739 1.00 47.04 C
ATOM 8 O4' C A 35 -4.082 -17.445 7.933 1.00 47.19 O
ATOM 9 C3' C A 35 -5.779 -18.884 8.645 1.00 46.67 C
ATOM 10 O3' C A 35 -5.975 -20.227 9.024 1.00 47.30 O
ATOM 11 C2' C A 35 -5.344 -18.054 9.846 1.00 46.58 C
ATOM 12 O2' C A 35 -4.467 -18.753 10.694 1.00 46.40 O
ATOM 13 C1' C A 35 -4.534 -16.951 9.178 1.00 46.00 C
ATOM 14 N1 C A 35 -5.272 -15.723 8.922 1.00 44.97 N
ATOM 15 C2 C A 35 -5.705 -14.961 9.995 1.00 44.15 C
ATOM 16 O2 C A 35 -5.467 -15.364 11.141 1.00 43.87 O
ATOM 17 N3 C A 35 -6.361 -13.792 9.751 1.00 44.10 N
ATOM 18 C4 C A 35 -6.569 -13.394 8.482 1.00 44.02 C
ATOM 19 N4 C A 35 -7.189 -12.242 8.272 1.00 42.60 N
ATOM 20 C5 C A 35 -6.139 -14.167 7.375 1.00 43.72 C
ATOM 21 C6 C A 35 -5.508 -15.314 7.635 1.00 45.18 C
ATOM 22 P U A 36 -7.431 -20.882 8.894 1.00 48.10 P
ATOM 23 OP1 U A 36 -7.375 -22.251 9.466 1.00 48.07 O
ATOM 24 OP2 U A 36 -7.962 -20.682 7.510 1.00 47.83 O
ATOM 25 O5' U A 36 -8.327 -19.993 9.857 1.00 47.48 O
TER
ATOM 1 O3' U B 33 -3.200 -15.234 -1.924 1.00 52.67 O
ATOM 2 P U B 34 -4.424 -16.017 -1.200 1.00 51.35 P
ATOM 3 OP1 U B 34 -4.033 -17.457 -1.215 1.00 49.95 O
ATOM 4 OP2 U B 34 -5.757 -15.609 -1.752 1.00 49.85 O
ATOM 5 O5' U B 34 -4.378 -15.520 0.321 1.00 48.74 O
ATOM 6 C5' U B 34 -3.317 -15.907 1.192 1.00 46.39 C
ATOM 7 C4' U B 34 -3.712 -15.681 2.632 1.00 45.00 C
ATOM 8 O4' U B 34 -3.584 -14.274 2.948 1.00 44.04 O
ATOM 9 C3' U B 34 -5.146 -16.084 2.979 1.00 45.36 C
ATOM 10 O3' U B 34 -5.140 -16.870 4.162 1.00 46.59 O
ATOM 11 C2' U B 34 -5.865 -14.744 3.161 1.00 44.21 C
ATOM 12 O2' U B 34 -6.913 -14.755 4.121 1.00 44.78 O
ATOM 13 C1' U B 34 -4.725 -13.863 3.657 1.00 43.59 C
ATOM 14 N1 U B 34 -4.917 -12.416 3.474 1.00 41.93 N
ATOM 15 C2 U B 34 -4.587 -11.617 4.547 1.00 40.51 C
ATOM 16 O2 U B 34 -4.175 -12.066 5.597 1.00 41.45 O
ATOM 17 N3 U B 34 -4.766 -10.283 4.359 1.00 40.56 N
ATOM 18 C4 U B 34 -5.240 -9.659 3.228 1.00 40.35 C
ATOM 19 O4 U B 34 -5.320 -8.428 3.217 1.00 40.72 O
ATOM 20 C5 U B 34 -5.583 -10.554 2.147 1.00 40.45 C
ATOM 21 C6 U B 34 -5.407 -11.873 2.306 1.00 41.32 C
ATOM 22 P C B 35 -6.330 -17.919 4.431 1.00 49.27 P
ATOM 23 OP1 C B 35 -6.163 -19.100 3.534 1.00 48.38 O
ATOM 24 OP2 C B 35 -7.620 -17.173 4.426 1.00 47.38 O
ATOM 25 O5' C B 35 -6.059 -18.396 5.918 1.00 47.63 O
TER
ATOM 2 P C A 35 -6.330 -17.919 4.431 1.00 49.27 P
ATOM 3 OP1 C A 35 -6.163 -19.100 3.534 1.00 48.38 O
ATOM 4 OP2 C A 35 -7.620 -17.173 4.426 1.00 47.38 O
ATOM 5 O5' C A 35 -6.059 -18.396 5.918 1.00 47.63 O
ATOM 6 C5' C A 35 -4.834 -19.015 6.273 1.00 47.64 C
ATOM 7 C4' C A 35 -4.564 -18.797 7.739 1.00 47.04 C
ATOM 8 O4' C A 35 -4.082 -17.445 7.933 1.00 47.19 O
ATOM 9 C3' C A 35 -5.779 -18.884 8.645 1.00 46.67 C
ATOM 10 O3' C A 35 -5.975 -20.227 9.024 1.00 47.30 O
ATOM 11 C2' C A 35 -5.344 -18.054 9.846 1.00 46.58 C
ATOM 12 O2' C A 35 -4.467 -18.753 10.694 1.00 46.40 O
ATOM 13 C1' C A 35 -4.534 -16.951 9.178 1.00 46.00 C
ATOM 14 N1 C A 35 -5.272 -15.723 8.922 1.00 44.97 N
ATOM 15 C2 C A 35 -5.705 -14.961 9.995 1.00 44.15 C
ATOM 16 O2 C A 35 -5.467 -15.364 11.141 1.00 43.87 O
ATOM 17 N3 C A 35 -6.361 -13.792 9.751 1.00 44.10 N
ATOM 18 C4 C A 35 -6.569 -13.394 8.482 1.00 44.02 C
ATOM 19 N4 C A 35 -7.189 -12.242 8.272 1.00 42.60 N
ATOM 20 C5 C A 35 -6.139 -14.167 7.375 1.00 43.72 C
ATOM 21 C6 C A 35 -5.508 -15.314 7.635 1.00 45.18 C
ATOM 22 P U A 36 -7.431 -20.882 8.894 1.00 48.10 P
ATOM 23 OP1 U A 36 -7.375 -22.251 9.466 1.00 48.07 O
ATOM 24 OP2 U A 36 -7.962 -20.682 7.510 1.00 47.83 O
ATOM 25 O5' U A 36 -8.327 -19.993 9.857 1.00 47.48 O
TER
ATOM 1 O3' U B 33 -3.200 -15.234 -1.924 1.00 52.67 O
ATOM 2 P U B 34 -4.424 -16.017 -1.200 1.00 51.35 P
ATOM 3 OP1 U B 34 -4.033 -17.457 -1.215 1.00 49.95 O
ATOM 4 OP2 U B 34 -5.757 -15.609 -1.752 1.00 49.85 O
ATOM 5 O5' U B 34 -4.378 -15.520 0.321 1.00 48.74 O
ATOM 6 C5' U B 34 -3.317 -15.907 1.192 1.00 46.39 C
ATOM 7 C4' U B 34 -3.712 -15.681 2.632 1.00 45.00 C
ATOM 8 O4' U B 34 -3.584 -14.274 2.948 1.00 44.04 O
ATOM 9 C3' U B 34 -5.146 -16.084 2.979 1.00 45.36 C
ATOM 10 O3' U B 34 -5.140 -16.870 4.162 1.00 46.59 O
ATOM 11 C2' U B 34 -5.865 -14.744 3.161 1.00 44.21 C
ATOM 12 O2' U B 34 -6.913 -14.755 4.121 1.00 44.78 O
ATOM 13 C1' U B 34 -4.725 -13.863 3.657 1.00 43.59 C
ATOM 14 N1 U B 34 -4.917 -12.416 3.474 1.00 41.93 N
ATOM 15 C2 U B 34 -4.587 -11.617 4.547 1.00 40.51 C
ATOM 16 O2 U B 34 -4.175 -12.066 5.597 1.00 41.45 O
ATOM 17 N3 U B 34 -4.766 -10.283 4.359 1.00 40.56 N
ATOM 18 C4 U B 34 -5.240 -9.659 3.228 1.00 40.35 C
ATOM 19 O4 U B 34 -5.320 -8.428 3.217 1.00 40.72 O
ATOM 20 C5 U B 34 -5.583 -10.554 2.147 1.00 40.45 C
ATOM 21 C6 U B 34 -5.407 -11.873 2.306 1.00 41.32 C
ATOM 22 P C B 35 -6.330 -17.919 4.431 1.00 49.27 P
ATOM 23 OP1 C B 35 -6.163 -19.100 3.534 1.00 48.38 O
ATOM 24 OP2 C B 35 -7.620 -17.173 4.426 1.00 47.38 O
ATOM 25 O5' C B 35 -6.059 -18.396 5.918 1.00 47.63 O
TER
Atoms:
C2: (-5.705,-14.961,9.995)
OP1: (-6.163,-19.100,3.534)
OP2: (-7.620,-17.173,4.426)
C4: (-6.569,-13.394,8.482)
O5': (-6.059,-18.396,5.918)
C3': (-5.779,-18.884,8.645)
C1': (-4.534,-16.951,9.178)
O4': (-4.082,-17.445,7.933)
C5': (-4.834,-19.015,6.273)
P: (-6.330,-17.919,4.431)
O2: (-5.467,-15.364,11.141)
C4': (-4.564,-18.797,7.739)
C2': (-5.344,-18.054,9.846)
O2': (-4.467,-18.753,10.694)
N1: (-5.272,-15.723,8.922)
N3: (-6.361,-13.792,9.751)
N4: (-7.189,-12.242,8.272)
C6: (-5.508,-15.314,7.635)
C5: (-6.139,-14.167,7.375)
O3': (-5.975,-20.227,9.024)
OP1: (-6.163,-19.100,3.534)
OP2: (-7.620,-17.173,4.426)
C4: (-6.569,-13.394,8.482)
O5': (-6.059,-18.396,5.918)
C3': (-5.779,-18.884,8.645)
C1': (-4.534,-16.951,9.178)
O4': (-4.082,-17.445,7.933)
C5': (-4.834,-19.015,6.273)
P: (-6.330,-17.919,4.431)
O2: (-5.467,-15.364,11.141)
C4': (-4.564,-18.797,7.739)
C2': (-5.344,-18.054,9.846)
O2': (-4.467,-18.753,10.694)
N1: (-5.272,-15.723,8.922)
N3: (-6.361,-13.792,9.751)
N4: (-7.189,-12.242,8.272)
C6: (-5.508,-15.314,7.635)
C5: (-6.139,-14.167,7.375)
O3': (-5.975,-20.227,9.024)
C4: (-5.240,-9.659,3.228)
N3: (-4.766,-10.283,4.359)
OP1: (-4.033,-17.457,-1.215)
OP2: (-5.757,-15.609,-1.752)
C2: (-4.587,-11.617,4.547)
C1': (-4.725,-13.863,3.657)
C3': (-5.146,-16.084,2.979)
O5': (-4.378,-15.520,0.321)
O4': (-3.584,-14.274,2.948)
C5': (-3.317,-15.907,1.192)
P: (-4.424,-16.017,-1.200)
C4': (-3.712,-15.681,2.632)
C2': (-5.865,-14.744,3.161)
O2': (-6.913,-14.755,4.121)
N1: (-4.917,-12.416,3.474)
O4: (-5.320,-8.428,3.217)
O2: (-4.175,-12.066,5.597)
C6: (-5.407,-11.873,2.306)
C5: (-5.583,-10.554,2.147)
O3': (-5.140,-16.870,4.162)
N3: (-4.766,-10.283,4.359)
OP1: (-4.033,-17.457,-1.215)
OP2: (-5.757,-15.609,-1.752)
C2: (-4.587,-11.617,4.547)
C1': (-4.725,-13.863,3.657)
C3': (-5.146,-16.084,2.979)
O5': (-4.378,-15.520,0.321)
O4': (-3.584,-14.274,2.948)
C5': (-3.317,-15.907,1.192)
P: (-4.424,-16.017,-1.200)
C4': (-3.712,-15.681,2.632)
C2': (-5.865,-14.744,3.161)
O2': (-6.913,-14.755,4.121)
N1: (-4.917,-12.416,3.474)
O4: (-5.320,-8.428,3.217)
O2: (-4.175,-12.066,5.597)
C6: (-5.407,-11.873,2.306)
C5: (-5.583,-10.554,2.147)
O3': (-5.140,-16.870,4.162)
Image (generated by PyMOL):