ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A347:A346

Extra

PDB:
ATOM 1 O3' U A 346 80.412 3.666 68.380 1.00 68.85 O
ATOM 2 P C A 347 79.820 2.224 68.788 1.00 61.11 P
ATOM 3 OP1 C A 347 80.537 1.190 68.010 1.00 60.89 O
ATOM 4 OP2 C A 347 78.338 2.303 68.695 1.00 65.10 O
ATOM 5 O5' C A 347 80.189 2.088 70.336 1.00 55.36 O
ATOM 6 C5' C A 347 81.497 2.417 70.833 1.00 66.77 C
ATOM 7 C4' C A 347 81.445 2.810 72.311 1.00 68.03 C
ATOM 8 O4' C A 347 80.754 4.076 72.446 1.00 66.83 O
ATOM 9 C3' C A 347 80.814 1.852 73.327 1.00 73.58 C
ATOM 10 O3' C A 347 81.681 1.167 74.250 1.00 71.37 O
ATOM 11 C2' C A 347 79.531 2.524 73.822 1.00 71.55 C
ATOM 12 O2' C A 347 79.374 2.495 75.226 1.00 78.34 O
ATOM 13 C1' C A 347 79.705 3.979 73.394 1.00 66.10 C
ATOM 14 N1 C A 347 78.476 4.509 72.766 1.00 67.56 N
ATOM 15 C2 C A 347 77.395 4.899 73.583 1.00 71.51 C
ATOM 16 O2 C A 347 77.474 4.739 74.817 1.00 72.06 O
ATOM 17 N3 C A 347 76.290 5.429 72.995 1.00 71.80 N
ATOM 18 C4 C A 347 76.233 5.557 71.658 1.00 69.82 C
ATOM 19 N4 C A 347 75.134 6.084 71.117 1.00 74.97 N
ATOM 20 C5 C A 347 77.305 5.147 70.816 1.00 68.16 C
ATOM 21 C6 C A 347 78.392 4.634 71.403 1.00 70.22 C
ATOM 22 P U A 348 82.467 1.974 75.405 1.00 77.14 P
ATOM 23 OP1 U A 348 82.058 3.396 75.394 1.00 76.46 O
ATOM 24 OP2 U A 348 83.915 1.632 75.260 1.00 77.02 O
ATOM 25 O5' U A 348 82.003 1.343 76.798 1.00 73.27 O
TER

ATOM 1 O3' A B 345 84.108 4.292 63.575 1.00 65.98 O
ATOM 2 P U B 346 83.561 3.082 64.477 1.00 71.13 P
ATOM 3 OP1 U B 346 84.587 2.739 65.491 1.00 73.52 O
ATOM 4 OP2 U B 346 83.033 2.017 63.595 1.00 70.15 O
ATOM 5 O5' U B 346 82.345 3.747 65.250 1.00 76.39 O
ATOM 6 C5' U B 346 82.578 4.741 66.241 1.00 73.25 C
ATOM 7 C4' U B 346 81.264 5.254 66.762 1.00 66.96 C
ATOM 8 O4' U B 346 80.656 6.103 65.766 1.00 62.83 O
ATOM 9 C3' U B 346 80.223 4.181 67.052 1.00 68.58 C
ATOM 10 O3' U B 346 80.412 3.666 68.380 1.00 68.85 O
ATOM 11 C2' U B 346 78.893 4.933 66.900 1.00 65.26 C
ATOM 12 O2' U B 346 78.430 5.477 68.114 1.00 70.36 O
ATOM 13 C1' U B 346 79.265 6.098 65.974 1.00 61.24 C
ATOM 14 N1 U B 346 78.569 6.246 64.687 1.00 57.71 N
ATOM 15 C2 U B 346 78.934 5.461 63.615 1.00 66.20 C
ATOM 16 O2 U B 346 79.742 4.559 63.698 1.00 75.32 O
ATOM 17 N3 U B 346 78.300 5.759 62.440 1.00 64.96 N
ATOM 18 C4 U B 346 77.342 6.723 62.235 1.00 64.38 C
ATOM 19 O4 U B 346 76.977 6.981 61.086 1.00 66.85 O
ATOM 20 C5 U B 346 76.977 7.445 63.405 1.00 65.03 C
ATOM 21 C6 U B 346 77.591 7.189 64.558 1.00 58.18 C
ATOM 22 P C B 347 79.820 2.224 68.788 1.00 61.11 P
ATOM 23 OP1 C B 347 80.537 1.190 68.010 1.00 60.89 O
ATOM 24 OP2 C B 347 78.338 2.303 68.695 1.00 65.10 O
ATOM 25 O5' C B 347 80.189 2.088 70.336 1.00 55.36 O
TER

Atoms:
C2: (77.395,4.899,73.583)
OP1: (80.537,1.190,68.010)
OP2: (78.338,2.303,68.695)
C4: (76.233,5.557,71.658)
O5': (80.189,2.088,70.336)
C3': (80.814,1.852,73.327)
C1': (79.705,3.979,73.394)
O4': (80.754,4.076,72.446)
C5': (81.497,2.417,70.833)
P: (79.820,2.224,68.788)
O2: (77.474,4.739,74.817)
C4': (81.445,2.810,72.311)
C2': (79.531,2.524,73.822)
O2': (79.374,2.495,75.226)
N1: (78.476,4.509,72.766)
N3: (76.290,5.429,72.995)
N4: (75.134,6.084,71.117)
C6: (78.392,4.634,71.403)
C5: (77.305,5.147,70.816)
O3': (81.681,1.167,74.250)
C4: (77.342,6.723,62.235)
N3: (78.300,5.759,62.440)
OP1: (84.587,2.739,65.491)
OP2: (83.033,2.017,63.595)
C2: (78.934,5.461,63.615)
C1': (79.265,6.098,65.974)
C3': (80.223,4.181,67.052)
O5': (82.345,3.747,65.250)
O4': (80.656,6.103,65.766)
C5': (82.578,4.741,66.241)
P: (83.561,3.082,64.477)
C4': (81.264,5.254,66.762)
C2': (78.893,4.933,66.900)
O2': (78.430,5.477,68.114)
N1: (78.569,6.246,64.687)
O4: (76.977,6.981,61.086)
O2: (79.742,4.559,63.698)
C6: (77.591,7.189,64.558)
C5: (76.977,7.445,63.405)
O3': (80.412,3.666,68.380)
Image (generated by PyMOL):
PyMOL image
show in jmol