Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2425:A2424
Extra
PDB:
ATOM 1 O3' U A2424 99.065 -56.052 29.611 1.00 42.54 O
ATOM 2 P C A2425 99.503 -54.506 29.605 1.00 47.91 P
ATOM 3 OP1 C A2425 100.236 -54.159 28.353 1.00 42.77 O
ATOM 4 OP2 C A2425 100.134 -54.208 30.916 1.00 41.41 O
ATOM 5 O5' C A2425 98.066 -53.829 29.579 1.00 42.94 O
ATOM 6 C5' C A2425 97.850 -52.544 30.110 1.00 41.56 C
ATOM 7 C4' C A2425 96.545 -52.507 30.849 1.00 43.46 C
ATOM 8 O4' C A2425 95.512 -53.124 30.040 1.00 40.59 O
ATOM 9 C3' C A2425 96.512 -53.259 32.175 1.00 44.45 C
ATOM 10 O3' C A2425 97.005 -52.388 33.193 1.00 48.37 O
ATOM 11 C2' C A2425 95.031 -53.553 32.336 1.00 41.75 C
ATOM 12 O2' C A2425 94.378 -52.398 32.821 1.00 42.11 O
ATOM 13 C1' C A2425 94.599 -53.795 30.884 1.00 37.04 C
ATOM 14 N1 C A2425 94.529 -55.221 30.495 1.00 43.53 N
ATOM 15 C2 C A2425 93.459 -55.991 30.962 1.00 47.52 C
ATOM 16 O2 C A2425 92.655 -55.478 31.737 1.00 50.82 O
ATOM 17 N3 C A2425 93.325 -57.277 30.567 1.00 45.30 N
ATOM 18 C4 C A2425 94.230 -57.812 29.756 1.00 45.81 C
ATOM 19 N4 C A2425 94.034 -59.087 29.357 1.00 48.14 N
ATOM 20 C5 C A2425 95.369 -57.073 29.299 1.00 46.37 C
ATOM 21 C6 C A2425 95.473 -55.788 29.686 1.00 46.94 C
ATOM 22 P C A2426 97.236 -52.927 34.691 1.00 54.08 P
ATOM 23 OP1 C A2426 97.943 -51.817 35.403 1.00 46.37 O
ATOM 24 OP2 C A2426 97.872 -54.286 34.610 1.00 45.94 O
ATOM 25 O5' C A2426 95.761 -53.041 35.288 1.00 49.98 O
TER
ATOM 1 O3' A B2423 102.786 -59.074 25.542 1.00 38.99 O
ATOM 2 P U B2424 102.580 -59.153 27.122 1.00 41.75 P
ATOM 3 OP1 U B2424 103.113 -57.886 27.700 1.00 46.82 O
ATOM 4 OP2 U B2424 103.132 -60.468 27.563 1.00 41.32 O
ATOM 5 O5' U B2424 101.006 -59.187 27.310 1.00 39.96 O
ATOM 6 C5' U B2424 100.192 -58.139 26.801 1.00 44.72 C
ATOM 7 C4' U B2424 99.253 -57.657 27.879 1.00 44.96 C
ATOM 8 O4' U B2424 98.480 -58.792 28.362 1.00 51.75 O
ATOM 9 C3' U B2424 99.932 -57.056 29.106 1.00 42.10 C
ATOM 10 O3' U B2424 99.065 -56.052 29.611 1.00 42.54 O
ATOM 11 C2' U B2424 99.960 -58.227 30.090 1.00 44.68 C
ATOM 12 O2' U B2424 99.921 -57.863 31.449 1.00 49.43 O
ATOM 13 C1' U B2424 98.650 -58.929 29.755 1.00 48.51 C
ATOM 14 N1 U B2424 98.571 -60.357 30.106 1.00 50.38 N
ATOM 15 C2 U B2424 97.326 -60.856 30.448 1.00 54.69 C
ATOM 16 O2 U B2424 96.315 -60.181 30.426 1.00 55.50 O
ATOM 17 N3 U B2424 97.306 -62.179 30.802 1.00 56.63 N
ATOM 18 C4 U B2424 98.372 -63.036 30.844 1.00 49.28 C
ATOM 19 O4 U B2424 98.232 -64.124 31.371 1.00 42.78 O
ATOM 20 C5 U B2424 99.614 -62.467 30.444 1.00 51.91 C
ATOM 21 C6 U B2424 99.676 -61.176 30.106 1.00 52.35 C
ATOM 22 P C B2425 99.503 -54.506 29.605 1.00 47.91 P
ATOM 23 OP1 C B2425 100.236 -54.159 28.353 1.00 42.77 O
ATOM 24 OP2 C B2425 100.134 -54.208 30.916 1.00 41.41 O
ATOM 25 O5' C B2425 98.066 -53.829 29.579 1.00 42.94 O
TER
ATOM 2 P C A2425 99.503 -54.506 29.605 1.00 47.91 P
ATOM 3 OP1 C A2425 100.236 -54.159 28.353 1.00 42.77 O
ATOM 4 OP2 C A2425 100.134 -54.208 30.916 1.00 41.41 O
ATOM 5 O5' C A2425 98.066 -53.829 29.579 1.00 42.94 O
ATOM 6 C5' C A2425 97.850 -52.544 30.110 1.00 41.56 C
ATOM 7 C4' C A2425 96.545 -52.507 30.849 1.00 43.46 C
ATOM 8 O4' C A2425 95.512 -53.124 30.040 1.00 40.59 O
ATOM 9 C3' C A2425 96.512 -53.259 32.175 1.00 44.45 C
ATOM 10 O3' C A2425 97.005 -52.388 33.193 1.00 48.37 O
ATOM 11 C2' C A2425 95.031 -53.553 32.336 1.00 41.75 C
ATOM 12 O2' C A2425 94.378 -52.398 32.821 1.00 42.11 O
ATOM 13 C1' C A2425 94.599 -53.795 30.884 1.00 37.04 C
ATOM 14 N1 C A2425 94.529 -55.221 30.495 1.00 43.53 N
ATOM 15 C2 C A2425 93.459 -55.991 30.962 1.00 47.52 C
ATOM 16 O2 C A2425 92.655 -55.478 31.737 1.00 50.82 O
ATOM 17 N3 C A2425 93.325 -57.277 30.567 1.00 45.30 N
ATOM 18 C4 C A2425 94.230 -57.812 29.756 1.00 45.81 C
ATOM 19 N4 C A2425 94.034 -59.087 29.357 1.00 48.14 N
ATOM 20 C5 C A2425 95.369 -57.073 29.299 1.00 46.37 C
ATOM 21 C6 C A2425 95.473 -55.788 29.686 1.00 46.94 C
ATOM 22 P C A2426 97.236 -52.927 34.691 1.00 54.08 P
ATOM 23 OP1 C A2426 97.943 -51.817 35.403 1.00 46.37 O
ATOM 24 OP2 C A2426 97.872 -54.286 34.610 1.00 45.94 O
ATOM 25 O5' C A2426 95.761 -53.041 35.288 1.00 49.98 O
TER
ATOM 1 O3' A B2423 102.786 -59.074 25.542 1.00 38.99 O
ATOM 2 P U B2424 102.580 -59.153 27.122 1.00 41.75 P
ATOM 3 OP1 U B2424 103.113 -57.886 27.700 1.00 46.82 O
ATOM 4 OP2 U B2424 103.132 -60.468 27.563 1.00 41.32 O
ATOM 5 O5' U B2424 101.006 -59.187 27.310 1.00 39.96 O
ATOM 6 C5' U B2424 100.192 -58.139 26.801 1.00 44.72 C
ATOM 7 C4' U B2424 99.253 -57.657 27.879 1.00 44.96 C
ATOM 8 O4' U B2424 98.480 -58.792 28.362 1.00 51.75 O
ATOM 9 C3' U B2424 99.932 -57.056 29.106 1.00 42.10 C
ATOM 10 O3' U B2424 99.065 -56.052 29.611 1.00 42.54 O
ATOM 11 C2' U B2424 99.960 -58.227 30.090 1.00 44.68 C
ATOM 12 O2' U B2424 99.921 -57.863 31.449 1.00 49.43 O
ATOM 13 C1' U B2424 98.650 -58.929 29.755 1.00 48.51 C
ATOM 14 N1 U B2424 98.571 -60.357 30.106 1.00 50.38 N
ATOM 15 C2 U B2424 97.326 -60.856 30.448 1.00 54.69 C
ATOM 16 O2 U B2424 96.315 -60.181 30.426 1.00 55.50 O
ATOM 17 N3 U B2424 97.306 -62.179 30.802 1.00 56.63 N
ATOM 18 C4 U B2424 98.372 -63.036 30.844 1.00 49.28 C
ATOM 19 O4 U B2424 98.232 -64.124 31.371 1.00 42.78 O
ATOM 20 C5 U B2424 99.614 -62.467 30.444 1.00 51.91 C
ATOM 21 C6 U B2424 99.676 -61.176 30.106 1.00 52.35 C
ATOM 22 P C B2425 99.503 -54.506 29.605 1.00 47.91 P
ATOM 23 OP1 C B2425 100.236 -54.159 28.353 1.00 42.77 O
ATOM 24 OP2 C B2425 100.134 -54.208 30.916 1.00 41.41 O
ATOM 25 O5' C B2425 98.066 -53.829 29.579 1.00 42.94 O
TER
Atoms:
C2: (93.459,-55.991,30.962)
OP1: (100.236,-54.159,28.353)
OP2: (100.134,-54.208,30.916)
C4: (94.230,-57.812,29.756)
O5': (98.066,-53.829,29.579)
C3': (96.512,-53.259,32.175)
C1': (94.599,-53.795,30.884)
O4': (95.512,-53.124,30.040)
C5': (97.850,-52.544,30.110)
P: (99.503,-54.506,29.605)
O2: (92.655,-55.478,31.737)
C4': (96.545,-52.507,30.849)
C2': (95.031,-53.553,32.336)
O2': (94.378,-52.398,32.821)
N1: (94.529,-55.221,30.495)
N3: (93.325,-57.277,30.567)
N4: (94.034,-59.087,29.357)
C6: (95.473,-55.788,29.686)
C5: (95.369,-57.073,29.299)
O3': (97.005,-52.388,33.193)
OP1: (100.236,-54.159,28.353)
OP2: (100.134,-54.208,30.916)
C4: (94.230,-57.812,29.756)
O5': (98.066,-53.829,29.579)
C3': (96.512,-53.259,32.175)
C1': (94.599,-53.795,30.884)
O4': (95.512,-53.124,30.040)
C5': (97.850,-52.544,30.110)
P: (99.503,-54.506,29.605)
O2: (92.655,-55.478,31.737)
C4': (96.545,-52.507,30.849)
C2': (95.031,-53.553,32.336)
O2': (94.378,-52.398,32.821)
N1: (94.529,-55.221,30.495)
N3: (93.325,-57.277,30.567)
N4: (94.034,-59.087,29.357)
C6: (95.473,-55.788,29.686)
C5: (95.369,-57.073,29.299)
O3': (97.005,-52.388,33.193)
C4: (98.372,-63.036,30.844)
N3: (97.306,-62.179,30.802)
OP1: (103.113,-57.886,27.700)
OP2: (103.132,-60.468,27.563)
C2: (97.326,-60.856,30.448)
C1': (98.650,-58.929,29.755)
C3': (99.932,-57.056,29.106)
O5': (101.006,-59.187,27.310)
O4': (98.480,-58.792,28.362)
C5': (100.192,-58.139,26.801)
P: (102.580,-59.153,27.122)
C4': (99.253,-57.657,27.879)
C2': (99.960,-58.227,30.090)
O2': (99.921,-57.863,31.449)
N1: (98.571,-60.357,30.106)
O4: (98.232,-64.124,31.371)
O2: (96.315,-60.181,30.426)
C6: (99.676,-61.176,30.106)
C5: (99.614,-62.467,30.444)
O3': (99.065,-56.052,29.611)
N3: (97.306,-62.179,30.802)
OP1: (103.113,-57.886,27.700)
OP2: (103.132,-60.468,27.563)
C2: (97.326,-60.856,30.448)
C1': (98.650,-58.929,29.755)
C3': (99.932,-57.056,29.106)
O5': (101.006,-59.187,27.310)
O4': (98.480,-58.792,28.362)
C5': (100.192,-58.139,26.801)
P: (102.580,-59.153,27.122)
C4': (99.253,-57.657,27.879)
C2': (99.960,-58.227,30.090)
O2': (99.921,-57.863,31.449)
N1: (98.571,-60.357,30.106)
O4: (98.232,-64.124,31.371)
O2: (96.315,-60.181,30.426)
C6: (99.676,-61.176,30.106)
C5: (99.614,-62.467,30.444)
O3': (99.065,-56.052,29.611)
Image (generated by PyMOL):