Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2608:A2607
Extra
PDB:
ATOM 1 O3' U A2607 10.565 -53.292 22.308 1.00 58.00 O
ATOM 2 P C A2608 10.096 -52.314 21.113 1.00 53.61 P
ATOM 3 OP1 C A2608 9.669 -53.087 19.914 1.00 43.76 O
ATOM 4 OP2 C A2608 11.158 -51.285 20.977 1.00 70.76 O
ATOM 5 O5' C A2608 8.775 -51.652 21.723 1.00 57.56 O
ATOM 6 C5' C A2608 8.542 -50.245 21.663 1.00 59.45 C
ATOM 7 C4' C A2608 7.982 -49.724 22.973 1.00 54.38 C
ATOM 8 O4' C A2608 6.850 -50.524 23.405 1.00 52.64 O
ATOM 9 C3' C A2608 8.903 -49.745 24.176 1.00 60.19 C
ATOM 10 O3' C A2608 9.796 -48.636 24.137 1.00 67.32 O
ATOM 11 C2' C A2608 7.912 -49.653 25.329 1.00 51.90 C
ATOM 12 O2' C A2608 7.415 -48.335 25.466 1.00 56.45 O
ATOM 13 C1' C A2608 6.761 -50.510 24.820 1.00 52.10 C
ATOM 14 N1 C A2608 6.813 -51.892 25.315 1.00 51.06 N
ATOM 15 C2 C A2608 6.465 -52.175 26.657 1.00 52.38 C
ATOM 16 O2 C A2608 6.107 -51.255 27.397 1.00 47.60 O
ATOM 17 N3 C A2608 6.526 -53.454 27.095 1.00 57.55 N
ATOM 18 C4 C A2608 6.903 -54.427 26.254 1.00 53.03 C
ATOM 19 N4 C A2608 6.924 -55.685 26.699 1.00 48.09 N
ATOM 20 C5 C A2608 7.264 -54.159 24.903 1.00 49.48 C
ATOM 21 C6 C A2608 7.201 -52.895 24.481 1.00 52.62 C
ATOM 22 P C A2609 11.254 -48.760 24.825 1.00 71.52 P
ATOM 23 OP1 C A2609 12.019 -47.543 24.430 1.00 71.29 O
ATOM 24 OP2 C A2609 11.798 -50.122 24.529 1.00 54.87 O
ATOM 25 O5' C A2609 10.985 -48.655 26.393 1.00 62.59 O
TER
ATOM 1 O3' C B2606 11.776 -58.872 19.511 1.00 55.13 O
ATOM 2 P U B2607 10.336 -58.498 18.903 1.00 50.92 P
ATOM 3 OP1 U B2607 9.446 -59.680 19.047 1.00 50.38 O
ATOM 4 OP2 U B2607 10.580 -57.917 17.555 1.00 50.38 O
ATOM 5 O5' U B2607 9.821 -57.314 19.841 1.00 48.60 O
ATOM 6 C5' U B2607 10.660 -56.188 20.101 1.00 47.20 C
ATOM 7 C4' U B2607 10.101 -55.346 21.214 1.00 51.48 C
ATOM 8 O4' U B2607 9.349 -56.139 22.153 1.00 56.03 O
ATOM 9 C3' U B2607 11.134 -54.554 22.014 1.00 53.68 C
ATOM 10 O3' U B2607 10.565 -53.292 22.308 1.00 58.00 O
ATOM 11 C2' U B2607 11.260 -55.370 23.303 1.00 57.97 C
ATOM 12 O2' U B2607 11.584 -54.583 24.441 1.00 59.46 O
ATOM 13 C1' U B2607 9.841 -55.924 23.456 1.00 54.81 C
ATOM 14 N1 U B2607 9.723 -57.171 24.235 1.00 50.95 N
ATOM 15 C2 U B2607 9.943 -57.083 25.601 1.00 49.58 C
ATOM 16 O2 U B2607 10.248 -56.048 26.164 1.00 50.89 O
ATOM 17 N3 U B2607 9.795 -58.253 26.286 1.00 49.71 N
ATOM 18 C4 U B2607 9.458 -59.475 25.765 1.00 55.99 C
ATOM 19 O4 U B2607 9.323 -60.429 26.527 1.00 61.49 O
ATOM 20 C5 U B2607 9.256 -59.495 24.348 1.00 51.71 C
ATOM 21 C6 U B2607 9.392 -58.374 23.647 1.00 50.34 C
ATOM 22 P C B2608 10.096 -52.314 21.113 1.00 53.61 P
ATOM 23 OP1 C B2608 9.669 -53.087 19.914 1.00 43.76 O
ATOM 24 OP2 C B2608 11.158 -51.285 20.977 1.00 70.76 O
ATOM 25 O5' C B2608 8.775 -51.652 21.723 1.00 57.56 O
TER
ATOM 2 P C A2608 10.096 -52.314 21.113 1.00 53.61 P
ATOM 3 OP1 C A2608 9.669 -53.087 19.914 1.00 43.76 O
ATOM 4 OP2 C A2608 11.158 -51.285 20.977 1.00 70.76 O
ATOM 5 O5' C A2608 8.775 -51.652 21.723 1.00 57.56 O
ATOM 6 C5' C A2608 8.542 -50.245 21.663 1.00 59.45 C
ATOM 7 C4' C A2608 7.982 -49.724 22.973 1.00 54.38 C
ATOM 8 O4' C A2608 6.850 -50.524 23.405 1.00 52.64 O
ATOM 9 C3' C A2608 8.903 -49.745 24.176 1.00 60.19 C
ATOM 10 O3' C A2608 9.796 -48.636 24.137 1.00 67.32 O
ATOM 11 C2' C A2608 7.912 -49.653 25.329 1.00 51.90 C
ATOM 12 O2' C A2608 7.415 -48.335 25.466 1.00 56.45 O
ATOM 13 C1' C A2608 6.761 -50.510 24.820 1.00 52.10 C
ATOM 14 N1 C A2608 6.813 -51.892 25.315 1.00 51.06 N
ATOM 15 C2 C A2608 6.465 -52.175 26.657 1.00 52.38 C
ATOM 16 O2 C A2608 6.107 -51.255 27.397 1.00 47.60 O
ATOM 17 N3 C A2608 6.526 -53.454 27.095 1.00 57.55 N
ATOM 18 C4 C A2608 6.903 -54.427 26.254 1.00 53.03 C
ATOM 19 N4 C A2608 6.924 -55.685 26.699 1.00 48.09 N
ATOM 20 C5 C A2608 7.264 -54.159 24.903 1.00 49.48 C
ATOM 21 C6 C A2608 7.201 -52.895 24.481 1.00 52.62 C
ATOM 22 P C A2609 11.254 -48.760 24.825 1.00 71.52 P
ATOM 23 OP1 C A2609 12.019 -47.543 24.430 1.00 71.29 O
ATOM 24 OP2 C A2609 11.798 -50.122 24.529 1.00 54.87 O
ATOM 25 O5' C A2609 10.985 -48.655 26.393 1.00 62.59 O
TER
ATOM 1 O3' C B2606 11.776 -58.872 19.511 1.00 55.13 O
ATOM 2 P U B2607 10.336 -58.498 18.903 1.00 50.92 P
ATOM 3 OP1 U B2607 9.446 -59.680 19.047 1.00 50.38 O
ATOM 4 OP2 U B2607 10.580 -57.917 17.555 1.00 50.38 O
ATOM 5 O5' U B2607 9.821 -57.314 19.841 1.00 48.60 O
ATOM 6 C5' U B2607 10.660 -56.188 20.101 1.00 47.20 C
ATOM 7 C4' U B2607 10.101 -55.346 21.214 1.00 51.48 C
ATOM 8 O4' U B2607 9.349 -56.139 22.153 1.00 56.03 O
ATOM 9 C3' U B2607 11.134 -54.554 22.014 1.00 53.68 C
ATOM 10 O3' U B2607 10.565 -53.292 22.308 1.00 58.00 O
ATOM 11 C2' U B2607 11.260 -55.370 23.303 1.00 57.97 C
ATOM 12 O2' U B2607 11.584 -54.583 24.441 1.00 59.46 O
ATOM 13 C1' U B2607 9.841 -55.924 23.456 1.00 54.81 C
ATOM 14 N1 U B2607 9.723 -57.171 24.235 1.00 50.95 N
ATOM 15 C2 U B2607 9.943 -57.083 25.601 1.00 49.58 C
ATOM 16 O2 U B2607 10.248 -56.048 26.164 1.00 50.89 O
ATOM 17 N3 U B2607 9.795 -58.253 26.286 1.00 49.71 N
ATOM 18 C4 U B2607 9.458 -59.475 25.765 1.00 55.99 C
ATOM 19 O4 U B2607 9.323 -60.429 26.527 1.00 61.49 O
ATOM 20 C5 U B2607 9.256 -59.495 24.348 1.00 51.71 C
ATOM 21 C6 U B2607 9.392 -58.374 23.647 1.00 50.34 C
ATOM 22 P C B2608 10.096 -52.314 21.113 1.00 53.61 P
ATOM 23 OP1 C B2608 9.669 -53.087 19.914 1.00 43.76 O
ATOM 24 OP2 C B2608 11.158 -51.285 20.977 1.00 70.76 O
ATOM 25 O5' C B2608 8.775 -51.652 21.723 1.00 57.56 O
TER
Atoms:
C2: (6.465,-52.175,26.657)
OP1: (9.669,-53.087,19.914)
OP2: (11.158,-51.285,20.977)
C4: (6.903,-54.427,26.254)
O5': (8.775,-51.652,21.723)
C3': (8.903,-49.745,24.176)
C1': (6.761,-50.510,24.820)
O4': (6.850,-50.524,23.405)
C5': (8.542,-50.245,21.663)
P: (10.096,-52.314,21.113)
O2: (6.107,-51.255,27.397)
C4': (7.982,-49.724,22.973)
C2': (7.912,-49.653,25.329)
O2': (7.415,-48.335,25.466)
N1: (6.813,-51.892,25.315)
N3: (6.526,-53.454,27.095)
N4: (6.924,-55.685,26.699)
C6: (7.201,-52.895,24.481)
C5: (7.264,-54.159,24.903)
O3': (9.796,-48.636,24.137)
OP1: (9.669,-53.087,19.914)
OP2: (11.158,-51.285,20.977)
C4: (6.903,-54.427,26.254)
O5': (8.775,-51.652,21.723)
C3': (8.903,-49.745,24.176)
C1': (6.761,-50.510,24.820)
O4': (6.850,-50.524,23.405)
C5': (8.542,-50.245,21.663)
P: (10.096,-52.314,21.113)
O2: (6.107,-51.255,27.397)
C4': (7.982,-49.724,22.973)
C2': (7.912,-49.653,25.329)
O2': (7.415,-48.335,25.466)
N1: (6.813,-51.892,25.315)
N3: (6.526,-53.454,27.095)
N4: (6.924,-55.685,26.699)
C6: (7.201,-52.895,24.481)
C5: (7.264,-54.159,24.903)
O3': (9.796,-48.636,24.137)
C4: (9.458,-59.475,25.765)
N3: (9.795,-58.253,26.286)
OP1: (9.446,-59.680,19.047)
OP2: (10.580,-57.917,17.555)
C2: (9.943,-57.083,25.601)
C1': (9.841,-55.924,23.456)
C3': (11.134,-54.554,22.014)
O5': (9.821,-57.314,19.841)
O4': (9.349,-56.139,22.153)
C5': (10.660,-56.188,20.101)
P: (10.336,-58.498,18.903)
C4': (10.101,-55.346,21.214)
C2': (11.260,-55.370,23.303)
O2': (11.584,-54.583,24.441)
N1: (9.723,-57.171,24.235)
O4: (9.323,-60.429,26.527)
O2: (10.248,-56.048,26.164)
C6: (9.392,-58.374,23.647)
C5: (9.256,-59.495,24.348)
O3': (10.565,-53.292,22.308)
N3: (9.795,-58.253,26.286)
OP1: (9.446,-59.680,19.047)
OP2: (10.580,-57.917,17.555)
C2: (9.943,-57.083,25.601)
C1': (9.841,-55.924,23.456)
C3': (11.134,-54.554,22.014)
O5': (9.821,-57.314,19.841)
O4': (9.349,-56.139,22.153)
C5': (10.660,-56.188,20.101)
P: (10.336,-58.498,18.903)
C4': (10.101,-55.346,21.214)
C2': (11.260,-55.370,23.303)
O2': (11.584,-54.583,24.441)
N1: (9.723,-57.171,24.235)
O4: (9.323,-60.429,26.527)
O2: (10.248,-56.048,26.164)
C6: (9.392,-58.374,23.647)
C5: (9.256,-59.495,24.348)
O3': (10.565,-53.292,22.308)
Image (generated by PyMOL):