Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A2425:A2424
Extra
PDB:
ATOM 1 O3' U A2424 58.339 -83.297 145.990 1.00 83.94 O
ATOM 2 P C A2425 58.243 -83.852 147.497 1.00 82.36 P
ATOM 3 OP1 C A2425 57.769 -85.262 147.487 1.00 78.96 O
ATOM 4 OP2 C A2425 57.514 -82.832 148.293 1.00 81.83 O
ATOM 5 O5' C A2425 59.758 -83.878 147.979 1.00 81.51 O
ATOM 6 C5' C A2425 60.085 -83.667 149.341 1.00 76.62 C
ATOM 7 C4' C A2425 61.268 -82.749 149.458 1.00 86.31 C
ATOM 8 O4' C A2425 62.490 -83.396 148.996 1.00 88.07 O
ATOM 9 C3' C A2425 61.183 -81.485 148.617 1.00 86.27 C
ATOM 10 O3' C A2425 60.314 -80.555 149.235 1.00 85.93 O
ATOM 11 C2' C A2425 62.645 -81.077 148.533 1.00 83.39 C
ATOM 12 O2' C A2425 63.075 -80.518 149.759 1.00 75.93 O
ATOM 13 C1' C A2425 63.327 -82.440 148.357 1.00 84.87 C
ATOM 14 N1 C A2425 63.448 -82.826 146.930 1.00 83.90 N
ATOM 15 C2 C A2425 64.537 -82.365 146.155 1.00 82.89 C
ATOM 16 O2 C A2425 65.409 -81.677 146.688 1.00 84.83 O
ATOM 17 N3 C A2425 64.597 -82.691 144.840 1.00 83.18 N
ATOM 18 C4 C A2425 63.630 -83.440 144.293 1.00 84.23 C
ATOM 19 N4 C A2425 63.704 -83.722 142.980 1.00 82.26 N
ATOM 20 C5 C A2425 62.534 -83.935 145.059 1.00 84.19 C
ATOM 21 C6 C A2425 62.487 -83.611 146.358 1.00 82.02 C
ATOM 22 P C A2426 59.974 -79.182 148.486 1.00 85.67 P
ATOM 23 OP1 C A2426 58.841 -78.495 149.160 1.00 80.21 O
ATOM 24 OP2 C A2426 59.896 -79.496 147.036 1.00 80.21 O
ATOM 25 O5' C A2426 61.270 -78.329 148.814 1.00 91.56 O
TER
ATOM 1 O3' A B2423 55.079 -87.851 143.007 1.00 87.67 O
ATOM 2 P U B2424 55.359 -86.285 142.780 1.00 94.97 P
ATOM 3 OP1 U B2424 54.717 -85.507 143.867 1.00 82.50 O
ATOM 4 OP2 U B2424 55.015 -85.993 141.368 1.00 85.87 O
ATOM 5 O5' U B2424 56.932 -86.112 142.921 1.00 85.87 O
ATOM 6 C5' U B2424 57.600 -86.387 144.152 1.00 85.47 C
ATOM 7 C4' U B2424 58.446 -85.210 144.557 1.00 80.64 C
ATOM 8 O4' U B2424 59.269 -84.832 143.423 1.00 81.75 O
ATOM 9 C3' U B2424 57.648 -83.975 144.947 1.00 83.87 C
ATOM 10 O3' U B2424 58.339 -83.297 145.990 1.00 83.94 O
ATOM 11 C2' U B2424 57.627 -83.157 143.659 1.00 84.20 C
ATOM 12 O2' U B2424 57.489 -81.767 143.875 1.00 86.31 O
ATOM 13 C1' U B2424 58.978 -83.513 143.035 1.00 83.43 C
ATOM 14 N1 U B2424 59.012 -83.473 141.563 1.00 84.49 N
ATOM 15 C2 U B2424 60.143 -82.943 140.948 1.00 86.45 C
ATOM 16 O2 U B2424 61.120 -82.536 141.567 1.00 88.25 O
ATOM 17 N3 U B2424 60.091 -82.914 139.574 1.00 83.28 N
ATOM 18 C4 U B2424 59.051 -83.349 138.765 1.00 79.25 C
ATOM 19 O4 U B2424 59.118 -83.192 137.540 1.00 79.14 O
ATOM 20 C5 U B2424 57.941 -83.902 139.471 1.00 83.53 C
ATOM 21 C6 U B2424 57.956 -83.943 140.809 1.00 84.44 C
ATOM 22 P C B2425 58.243 -83.852 147.497 1.00 82.36 P
ATOM 23 OP1 C B2425 57.769 -85.262 147.487 1.00 78.96 O
ATOM 24 OP2 C B2425 57.514 -82.832 148.293 1.00 81.83 O
ATOM 25 O5' C B2425 59.758 -83.878 147.979 1.00 81.51 O
TER
ATOM 2 P C A2425 58.243 -83.852 147.497 1.00 82.36 P
ATOM 3 OP1 C A2425 57.769 -85.262 147.487 1.00 78.96 O
ATOM 4 OP2 C A2425 57.514 -82.832 148.293 1.00 81.83 O
ATOM 5 O5' C A2425 59.758 -83.878 147.979 1.00 81.51 O
ATOM 6 C5' C A2425 60.085 -83.667 149.341 1.00 76.62 C
ATOM 7 C4' C A2425 61.268 -82.749 149.458 1.00 86.31 C
ATOM 8 O4' C A2425 62.490 -83.396 148.996 1.00 88.07 O
ATOM 9 C3' C A2425 61.183 -81.485 148.617 1.00 86.27 C
ATOM 10 O3' C A2425 60.314 -80.555 149.235 1.00 85.93 O
ATOM 11 C2' C A2425 62.645 -81.077 148.533 1.00 83.39 C
ATOM 12 O2' C A2425 63.075 -80.518 149.759 1.00 75.93 O
ATOM 13 C1' C A2425 63.327 -82.440 148.357 1.00 84.87 C
ATOM 14 N1 C A2425 63.448 -82.826 146.930 1.00 83.90 N
ATOM 15 C2 C A2425 64.537 -82.365 146.155 1.00 82.89 C
ATOM 16 O2 C A2425 65.409 -81.677 146.688 1.00 84.83 O
ATOM 17 N3 C A2425 64.597 -82.691 144.840 1.00 83.18 N
ATOM 18 C4 C A2425 63.630 -83.440 144.293 1.00 84.23 C
ATOM 19 N4 C A2425 63.704 -83.722 142.980 1.00 82.26 N
ATOM 20 C5 C A2425 62.534 -83.935 145.059 1.00 84.19 C
ATOM 21 C6 C A2425 62.487 -83.611 146.358 1.00 82.02 C
ATOM 22 P C A2426 59.974 -79.182 148.486 1.00 85.67 P
ATOM 23 OP1 C A2426 58.841 -78.495 149.160 1.00 80.21 O
ATOM 24 OP2 C A2426 59.896 -79.496 147.036 1.00 80.21 O
ATOM 25 O5' C A2426 61.270 -78.329 148.814 1.00 91.56 O
TER
ATOM 1 O3' A B2423 55.079 -87.851 143.007 1.00 87.67 O
ATOM 2 P U B2424 55.359 -86.285 142.780 1.00 94.97 P
ATOM 3 OP1 U B2424 54.717 -85.507 143.867 1.00 82.50 O
ATOM 4 OP2 U B2424 55.015 -85.993 141.368 1.00 85.87 O
ATOM 5 O5' U B2424 56.932 -86.112 142.921 1.00 85.87 O
ATOM 6 C5' U B2424 57.600 -86.387 144.152 1.00 85.47 C
ATOM 7 C4' U B2424 58.446 -85.210 144.557 1.00 80.64 C
ATOM 8 O4' U B2424 59.269 -84.832 143.423 1.00 81.75 O
ATOM 9 C3' U B2424 57.648 -83.975 144.947 1.00 83.87 C
ATOM 10 O3' U B2424 58.339 -83.297 145.990 1.00 83.94 O
ATOM 11 C2' U B2424 57.627 -83.157 143.659 1.00 84.20 C
ATOM 12 O2' U B2424 57.489 -81.767 143.875 1.00 86.31 O
ATOM 13 C1' U B2424 58.978 -83.513 143.035 1.00 83.43 C
ATOM 14 N1 U B2424 59.012 -83.473 141.563 1.00 84.49 N
ATOM 15 C2 U B2424 60.143 -82.943 140.948 1.00 86.45 C
ATOM 16 O2 U B2424 61.120 -82.536 141.567 1.00 88.25 O
ATOM 17 N3 U B2424 60.091 -82.914 139.574 1.00 83.28 N
ATOM 18 C4 U B2424 59.051 -83.349 138.765 1.00 79.25 C
ATOM 19 O4 U B2424 59.118 -83.192 137.540 1.00 79.14 O
ATOM 20 C5 U B2424 57.941 -83.902 139.471 1.00 83.53 C
ATOM 21 C6 U B2424 57.956 -83.943 140.809 1.00 84.44 C
ATOM 22 P C B2425 58.243 -83.852 147.497 1.00 82.36 P
ATOM 23 OP1 C B2425 57.769 -85.262 147.487 1.00 78.96 O
ATOM 24 OP2 C B2425 57.514 -82.832 148.293 1.00 81.83 O
ATOM 25 O5' C B2425 59.758 -83.878 147.979 1.00 81.51 O
TER
Atoms:
C2: (64.537,-82.365,146.155)
OP1: (57.769,-85.262,147.487)
OP2: (57.514,-82.832,148.293)
C4: (63.630,-83.440,144.293)
O5': (59.758,-83.878,147.979)
C3': (61.183,-81.485,148.617)
C1': (63.327,-82.440,148.357)
O4': (62.490,-83.396,148.996)
C5': (60.085,-83.667,149.341)
P: (58.243,-83.852,147.497)
O2: (65.409,-81.677,146.688)
C4': (61.268,-82.749,149.458)
C2': (62.645,-81.077,148.533)
O2': (63.075,-80.518,149.759)
N1: (63.448,-82.826,146.930)
N3: (64.597,-82.691,144.840)
N4: (63.704,-83.722,142.980)
C6: (62.487,-83.611,146.358)
C5: (62.534,-83.935,145.059)
O3': (60.314,-80.555,149.235)
OP1: (57.769,-85.262,147.487)
OP2: (57.514,-82.832,148.293)
C4: (63.630,-83.440,144.293)
O5': (59.758,-83.878,147.979)
C3': (61.183,-81.485,148.617)
C1': (63.327,-82.440,148.357)
O4': (62.490,-83.396,148.996)
C5': (60.085,-83.667,149.341)
P: (58.243,-83.852,147.497)
O2: (65.409,-81.677,146.688)
C4': (61.268,-82.749,149.458)
C2': (62.645,-81.077,148.533)
O2': (63.075,-80.518,149.759)
N1: (63.448,-82.826,146.930)
N3: (64.597,-82.691,144.840)
N4: (63.704,-83.722,142.980)
C6: (62.487,-83.611,146.358)
C5: (62.534,-83.935,145.059)
O3': (60.314,-80.555,149.235)
C4: (59.051,-83.349,138.765)
N3: (60.091,-82.914,139.574)
OP1: (54.717,-85.507,143.867)
OP2: (55.015,-85.993,141.368)
C2: (60.143,-82.943,140.948)
C1': (58.978,-83.513,143.035)
C3': (57.648,-83.975,144.947)
O5': (56.932,-86.112,142.921)
O4': (59.269,-84.832,143.423)
C5': (57.600,-86.387,144.152)
P: (55.359,-86.285,142.780)
C4': (58.446,-85.210,144.557)
C2': (57.627,-83.157,143.659)
O2': (57.489,-81.767,143.875)
N1: (59.012,-83.473,141.563)
O4: (59.118,-83.192,137.540)
O2: (61.120,-82.536,141.567)
C6: (57.956,-83.943,140.809)
C5: (57.941,-83.902,139.471)
O3': (58.339,-83.297,145.990)
N3: (60.091,-82.914,139.574)
OP1: (54.717,-85.507,143.867)
OP2: (55.015,-85.993,141.368)
C2: (60.143,-82.943,140.948)
C1': (58.978,-83.513,143.035)
C3': (57.648,-83.975,144.947)
O5': (56.932,-86.112,142.921)
O4': (59.269,-84.832,143.423)
C5': (57.600,-86.387,144.152)
P: (55.359,-86.285,142.780)
C4': (58.446,-85.210,144.557)
C2': (57.627,-83.157,143.659)
O2': (57.489,-81.767,143.875)
N1: (59.012,-83.473,141.563)
O4: (59.118,-83.192,137.540)
O2: (61.120,-82.536,141.567)
C6: (57.956,-83.943,140.809)
C5: (57.941,-83.902,139.471)
O3': (58.339,-83.297,145.990)
Image (generated by PyMOL):