ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MXH:R46:R45

Extra

PDB:
ATOM 1 O3' U A 45 -17.470 -8.943 -10.010 1.00 62.35 O
ATOM 2 P C A 46 -18.378 -10.215 -10.340 1.00 66.47 P
ATOM 3 OP1 C A 46 -17.720 -11.447 -9.847 1.00 65.45 O
ATOM 4 OP2 C A 46 -18.777 -10.113 -11.762 1.00 70.09 O
ATOM 5 O5' C A 46 -19.664 -9.931 -9.433 1.00 68.54 O
ATOM 6 C5' C A 46 -20.940 -10.463 -9.789 1.00 72.44 C
ATOM 7 C4' C A 46 -22.050 -9.788 -9.003 1.00 73.23 C
ATOM 8 O4' C A 46 -21.768 -9.885 -7.581 1.00 70.11 O
ATOM 9 C3' C A 46 -22.205 -8.294 -9.254 1.00 73.74 C
ATOM 10 O3' C A 46 -22.991 -8.052 -10.420 1.00 79.27 O
ATOM 11 C2' C A 46 -22.899 -7.841 -7.972 1.00 72.12 C
ATOM 12 O2' C A 46 -24.284 -8.127 -7.947 1.00 74.32 O
ATOM 13 C1' C A 46 -22.186 -8.696 -6.926 1.00 68.60 C
ATOM 14 N1 C A 46 -21.010 -8.007 -6.271 1.00 63.06 N
ATOM 15 C2 C A 46 -21.232 -6.968 -5.343 1.00 61.17 C
ATOM 16 O2 C A 46 -22.387 -6.619 -5.067 1.00 62.85 O
ATOM 17 N3 C A 46 -20.162 -6.365 -4.764 1.00 55.79 N
ATOM 18 C4 C A 46 -18.924 -6.753 -5.073 1.00 53.81 C
ATOM 19 N4 C A 46 -17.910 -6.122 -4.474 1.00 51.12 N
ATOM 20 C5 C A 46 -18.670 -7.802 -6.007 1.00 55.19 C
ATOM 21 C6 C A 46 -19.730 -8.394 -6.576 1.00 59.78 C
ATOM 22 P C A 47 -22.663 -6.816 -11.393 1.00 80.70 P
ATOM 23 OP1 C A 47 -23.514 -6.974 -12.596 1.00 83.27 O
ATOM 24 OP2 C A 47 -21.195 -6.700 -11.550 1.00 76.13 O
ATOM 25 O5' C A 47 -23.164 -5.550 -10.547 1.00 79.70 O
TER

ATOM 1 O3' C B 44 -13.102 -12.114 -5.225 1.00 48.25 O
ATOM 2 P U B 45 -12.806 -11.305 -6.572 1.00 49.47 P
ATOM 3 OP1 U B 45 -12.333 -12.253 -7.602 1.00 52.05 O
ATOM 4 OP2 U B 45 -11.988 -10.125 -6.219 1.00 47.45 O
ATOM 5 O5' U B 45 -14.273 -10.803 -6.962 1.00 55.47 O
ATOM 6 C5' U B 45 -14.605 -10.524 -8.312 1.00 57.90 C
ATOM 7 C4' U B 45 -15.789 -9.575 -8.399 1.00 58.35 C
ATOM 8 O4' U B 45 -15.564 -8.406 -7.567 1.00 56.30 O
ATOM 9 C3' U B 45 -16.068 -9.046 -9.802 1.00 60.56 C
ATOM 10 O3' U B 45 -17.470 -8.943 -10.010 1.00 62.35 O
ATOM 11 C2' U B 45 -15.415 -7.666 -9.777 1.00 58.62 C
ATOM 12 O2' U B 45 -16.016 -6.773 -10.693 1.00 62.67 O
ATOM 13 C1' U B 45 -15.723 -7.240 -8.347 1.00 55.68 C
ATOM 14 N1 U B 45 -14.847 -6.154 -7.791 1.00 52.10 N
ATOM 15 C2 U B 45 -15.444 -5.081 -7.152 1.00 50.85 C
ATOM 16 O2 U B 45 -16.648 -4.953 -7.014 1.00 53.39 O
ATOM 17 N3 U B 45 -14.573 -4.141 -6.671 1.00 49.71 N
ATOM 18 C4 U B 45 -13.198 -4.155 -6.756 1.00 49.27 C
ATOM 19 O4 U B 45 -12.567 -3.223 -6.271 1.00 52.77 O
ATOM 20 C5 U B 45 -12.637 -5.304 -7.426 1.00 48.53 C
ATOM 21 C6 U B 45 -13.466 -6.241 -7.909 1.00 51.19 C
ATOM 22 P C B 46 -18.378 -10.215 -10.340 1.00 66.47 P
ATOM 23 OP1 C B 46 -17.720 -11.447 -9.847 1.00 65.45 O
ATOM 24 OP2 C B 46 -18.777 -10.113 -11.762 1.00 70.09 O
ATOM 25 O5' C B 46 -19.664 -9.931 -9.433 1.00 68.54 O
TER

Atoms:
C2: (-21.232,-6.968,-5.343)
OP1: (-17.720,-11.447,-9.847)
OP2: (-18.777,-10.113,-11.762)
C4: (-18.924,-6.753,-5.073)
O5': (-19.664,-9.931,-9.433)
C3': (-22.205,-8.294,-9.254)
C1': (-22.186,-8.696,-6.926)
O4': (-21.768,-9.885,-7.581)
C5': (-20.940,-10.463,-9.789)
P: (-18.378,-10.215,-10.340)
O2: (-22.387,-6.619,-5.067)
C4': (-22.050,-9.788,-9.003)
C2': (-22.899,-7.841,-7.972)
O2': (-24.284,-8.127,-7.947)
N1: (-21.010,-8.007,-6.271)
N3: (-20.162,-6.365,-4.764)
N4: (-17.910,-6.122,-4.474)
C6: (-19.730,-8.394,-6.576)
C5: (-18.670,-7.802,-6.007)
O3': (-22.991,-8.052,-10.420)
C4: (-13.198,-4.155,-6.756)
N3: (-14.573,-4.141,-6.671)
OP1: (-12.333,-12.253,-7.602)
OP2: (-11.988,-10.125,-6.219)
C2: (-15.444,-5.081,-7.152)
C1': (-15.723,-7.240,-8.347)
C3': (-16.068,-9.046,-9.802)
O5': (-14.273,-10.803,-6.962)
O4': (-15.564,-8.406,-7.567)
C5': (-14.605,-10.524,-8.312)
P: (-12.806,-11.305,-6.572)
C4': (-15.789,-9.575,-8.399)
C2': (-15.415,-7.666,-9.777)
O2': (-16.016,-6.773,-10.693)
N1: (-14.847,-6.154,-7.791)
O4: (-12.567,-3.223,-6.271)
O2: (-16.648,-4.953,-7.014)
C6: (-13.466,-6.241,-7.909)
C5: (-12.637,-5.304,-7.426)
O3': (-17.470,-8.943,-10.010)
Image (generated by PyMOL):
PyMOL image
show in jmol