ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1263:A1261

Extra

PDB:
ATOM 1 O3' U A1262 26.386 -66.248 -18.459 1.00 29.21 O
ATOM 2 P C A1263 24.925 -66.887 -18.345 1.00 29.93 P
ATOM 3 OP1 C A1263 24.978 -67.985 -17.348 1.00 38.47 O
ATOM 4 OP2 C A1263 24.496 -67.196 -19.713 1.00 45.38 O
ATOM 5 O5' C A1263 24.053 -65.716 -17.765 1.00 35.16 O
ATOM 6 C5' C A1263 24.121 -64.423 -18.302 1.00 29.78 C
ATOM 7 C4' C A1263 22.761 -63.824 -18.434 1.00 31.83 C
ATOM 8 O4' C A1263 22.586 -63.412 -19.802 1.00 30.73 O
ATOM 9 C3' C A1263 21.593 -64.769 -18.150 1.00 36.96 C
ATOM 10 O3' C A1263 21.197 -64.780 -16.768 1.00 38.50 O
ATOM 11 C2' C A1263 20.514 -64.252 -19.076 1.00 35.39 C
ATOM 12 O2' C A1263 19.900 -63.112 -18.509 1.00 35.75 O
ATOM 13 C1' C A1263 21.331 -63.781 -20.267 1.00 35.01 C
ATOM 14 N1 C A1263 21.521 -64.805 -21.285 1.00 31.05 N
ATOM 15 C2 C A1263 20.470 -65.441 -21.941 1.00 39.37 C
ATOM 16 O2 C A1263 19.296 -65.188 -21.620 1.00 44.79 O
ATOM 17 N3 C A1263 20.771 -66.332 -22.912 1.00 37.34 N
ATOM 18 C4 C A1263 22.043 -66.548 -23.246 1.00 38.66 C
ATOM 19 N4 C A1263 22.348 -67.424 -24.202 1.00 42.18 N
ATOM 20 C5 C A1263 23.099 -65.875 -22.605 1.00 35.17 C
ATOM 21 C6 C A1263 22.792 -65.010 -21.644 1.00 28.67 C
ATOM 22 P C A1264 20.903 -66.182 -15.996 1.00 43.51 P
ATOM 23 OP1 C A1264 20.661 -65.860 -14.570 1.00 35.67 O
ATOM 24 OP2 C A1264 22.010 -67.130 -16.346 1.00 41.99 O
ATOM 25 O5' C A1264 19.564 -66.670 -16.664 1.00 33.25 O
TER

ATOM 1 O3' G B1260 29.975 -63.124 -27.483 1.00 36.15 O
ATOM 2 P U B1261 29.962 -64.670 -27.800 1.00 41.32 P
ATOM 3 OP1 U B1261 31.277 -65.215 -27.367 1.00 45.81 O
ATOM 4 OP2 U B1261 29.559 -64.820 -29.225 1.00 50.02 O
ATOM 5 O5' U B1261 28.827 -65.204 -26.847 1.00 38.47 O
ATOM 6 C5' U B1261 29.067 -65.363 -25.466 1.00 35.48 C
ATOM 7 C4' U B1261 27.809 -65.734 -24.765 1.00 34.65 C
ATOM 8 O4' U B1261 26.937 -64.584 -24.767 1.00 34.95 O
ATOM 9 C3' U B1261 27.028 -66.848 -25.436 1.00 36.67 C
ATOM 10 O3' U B1261 26.275 -67.540 -24.450 1.00 35.02 O
ATOM 11 C2' U B1261 26.094 -66.083 -26.363 1.00 35.62 C
ATOM 12 O2' U B1261 24.923 -66.780 -26.730 1.00 35.37 O
ATOM 13 C1' U B1261 25.774 -64.864 -25.520 1.00 37.53 C
ATOM 14 N1 U B1261 25.441 -63.667 -26.298 1.00 33.16 N
ATOM 15 C2 U B1261 24.108 -63.328 -26.364 1.00 39.33 C
ATOM 16 O2 U B1261 23.202 -63.980 -25.846 1.00 42.95 O
ATOM 17 N3 U B1261 23.877 -62.178 -27.068 1.00 38.21 N
ATOM 18 C4 U B1261 24.788 -61.370 -27.698 1.00 35.22 C
ATOM 19 O4 U B1261 24.389 -60.381 -28.303 1.00 37.61 O
ATOM 20 C5 U B1261 26.134 -61.799 -27.570 1.00 41.24 C
ATOM 21 C6 U B1261 26.408 -62.902 -26.881 1.00 36.09 C
ATOM 22 P U B1262 26.952 -68.748 -23.665 1.00 35.57 P
ATOM 23 OP1 U B1262 27.961 -69.335 -24.570 1.00 42.34 O
ATOM 24 OP2 U B1262 25.868 -69.616 -23.155 1.00 46.18 O
ATOM 25 O5' U B1262 27.670 -68.014 -22.456 1.00 37.98 O
TER

Atoms:
C2: (20.470,-65.441,-21.941)
OP1: (24.978,-67.985,-17.348)
OP2: (24.496,-67.196,-19.713)
C4: (22.043,-66.548,-23.246)
O5': (24.053,-65.716,-17.765)
C3': (21.593,-64.769,-18.150)
C1': (21.331,-63.781,-20.267)
O4': (22.586,-63.412,-19.802)
C5': (24.121,-64.423,-18.302)
P: (24.925,-66.887,-18.345)
O2: (19.296,-65.188,-21.620)
C4': (22.761,-63.824,-18.434)
C2': (20.514,-64.252,-19.076)
O2': (19.900,-63.112,-18.509)
N1: (21.521,-64.805,-21.285)
N3: (20.771,-66.332,-22.912)
N4: (22.348,-67.424,-24.202)
C6: (22.792,-65.010,-21.644)
C5: (23.099,-65.875,-22.605)
O3': (21.197,-64.780,-16.768)
C4: (24.788,-61.370,-27.698)
N3: (23.877,-62.178,-27.068)
OP1: (31.277,-65.215,-27.367)
OP2: (29.559,-64.820,-29.225)
C2: (24.108,-63.328,-26.364)
C1': (25.774,-64.864,-25.520)
C3': (27.028,-66.848,-25.436)
O5': (28.827,-65.204,-26.847)
O4': (26.937,-64.584,-24.767)
C5': (29.067,-65.363,-25.466)
P: (29.962,-64.670,-27.800)
C4': (27.809,-65.734,-24.765)
C2': (26.094,-66.083,-26.363)
O2': (24.923,-66.780,-26.730)
N1: (25.441,-63.667,-26.298)
O4: (24.389,-60.381,-28.303)
O2: (23.202,-63.980,-25.846)
C6: (26.408,-62.902,-26.881)
C5: (26.134,-61.799,-27.570)
O3': (26.275,-67.540,-24.450)
Image (generated by PyMOL):
PyMOL image
show in jmol