Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OIN:C6:C4
Extra
PDB:
ATOM 1 O3' U A 5 -4.306 -2.115 18.503 1.00 31.53 O
ATOM 2 P C A 6 -4.258 -1.338 17.118 1.00 38.76 P
ATOM 3 OP1 C A 6 -2.992 -0.552 17.009 1.00 37.50 O
ATOM 4 OP2 C A 6 -5.555 -0.652 17.000 1.00 33.03 O
ATOM 5 O5' C A 6 -4.212 -2.543 16.086 1.00 45.06 O
ATOM 6 C5' C A 6 -4.051 -2.212 14.717 1.00 35.01 C
ATOM 7 C4' C A 6 -4.161 -3.424 13.832 1.00 37.09 C
ATOM 8 O4' C A 6 -3.140 -4.394 14.162 1.00 42.82 O
ATOM 9 C3' C A 6 -5.459 -4.204 13.907 1.00 40.15 C
ATOM 10 O3' C A 6 -6.492 -3.561 13.167 1.00 36.53 O
ATOM 11 C2' C A 6 -5.046 -5.574 13.362 1.00 47.43 C
ATOM 12 O2' C A 6 -5.035 -5.557 11.940 1.00 51.65 O
ATOM 13 C1' C A 6 -3.587 -5.692 13.827 1.00 47.23 C
ATOM 14 N1 C A 6 -3.225 -6.509 14.995 1.00 45.02 N
ATOM 15 C2 C A 6 -1.982 -7.162 14.957 1.00 44.67 C
ATOM 16 O2 C A 6 -1.277 -7.066 13.928 1.00 46.79 O
ATOM 17 N3 C A 6 -1.592 -7.889 16.034 1.00 48.49 N
ATOM 18 C4 C A 6 -2.378 -7.960 17.116 1.00 51.65 C
ATOM 19 N4 C A 6 -1.963 -8.687 18.155 1.00 55.10 N
ATOM 20 C5 C A 6 -3.630 -7.278 17.183 1.00 49.27 C
ATOM 21 C6 C A 6 -4.007 -6.562 16.118 1.00 47.00 C
ATOM 22 P A A 7 -8.031 -4.044 13.286 1.00 43.74 P
ATOM 23 OP1 A A 7 -8.472 -3.679 14.665 1.00 43.94 O
ATOM 24 OP2 A A 7 -8.067 -5.487 12.899 1.00 44.14 O
ATOM 25 O5' A A 7 -8.759 -3.112 12.232 1.00 44.24 O
TER
ATOM 1 O3' C B 3 -11.651 -9.802 20.716 1.00 43.84 O
ATOM 2 P U B 4 -11.327 -8.261 21.059 1.00 45.98 P
ATOM 3 OP1 U B 4 -11.316 -8.199 22.533 1.00 46.20 O
ATOM 4 OP2 U B 4 -12.250 -7.406 20.265 1.00 41.44 O
ATOM 5 O5' U B 4 -9.823 -8.086 20.540 1.00 39.25 O
ATOM 6 C5' U B 4 -8.781 -8.920 21.045 1.00 44.99 C
ATOM 7 C4' U B 4 -7.542 -8.826 20.190 1.00 42.99 C
ATOM 8 O4' U B 4 -7.917 -9.094 18.806 1.00 41.22 O
ATOM 9 C3' U B 4 -6.859 -7.456 20.201 1.00 40.77 C
ATOM 10 O3' U B 4 -5.450 -7.621 20.045 1.00 42.66 O
ATOM 11 C2' U B 4 -7.436 -6.803 18.947 1.00 38.78 C
ATOM 12 O2' U B 4 -6.664 -5.756 18.397 1.00 35.57 O
ATOM 13 C1' U B 4 -7.546 -7.994 17.996 1.00 36.80 C
ATOM 14 N1 U B 4 -8.569 -7.660 16.993 1.00 39.61 N
ATOM 15 C2 U B 4 -8.126 -7.457 15.700 1.00 41.94 C
ATOM 16 O2 U B 4 -6.944 -7.600 15.375 1.00 42.32 O
ATOM 17 N3 U B 4 -9.129 -7.111 14.819 1.00 41.24 N
ATOM 18 C4 U B 4 -10.477 -6.924 15.094 1.00 38.75 C
ATOM 19 O4 U B 4 -11.251 -6.605 14.184 1.00 47.44 O
ATOM 20 C5 U B 4 -10.842 -7.143 16.461 1.00 37.91 C
ATOM 21 C6 U B 4 -9.893 -7.485 17.342 1.00 39.12 C
ATOM 22 P U B 5 -4.398 -7.181 21.175 1.00 49.98 P
ATOM 23 OP1 U B 5 -3.059 -7.687 20.762 1.00 48.36 O
ATOM 24 OP2 U B 5 -4.966 -7.572 22.489 1.00 50.10 O
ATOM 25 O5' U B 5 -4.444 -5.601 21.018 1.00 43.59 O
TER
ATOM 2 P C A 6 -4.258 -1.338 17.118 1.00 38.76 P
ATOM 3 OP1 C A 6 -2.992 -0.552 17.009 1.00 37.50 O
ATOM 4 OP2 C A 6 -5.555 -0.652 17.000 1.00 33.03 O
ATOM 5 O5' C A 6 -4.212 -2.543 16.086 1.00 45.06 O
ATOM 6 C5' C A 6 -4.051 -2.212 14.717 1.00 35.01 C
ATOM 7 C4' C A 6 -4.161 -3.424 13.832 1.00 37.09 C
ATOM 8 O4' C A 6 -3.140 -4.394 14.162 1.00 42.82 O
ATOM 9 C3' C A 6 -5.459 -4.204 13.907 1.00 40.15 C
ATOM 10 O3' C A 6 -6.492 -3.561 13.167 1.00 36.53 O
ATOM 11 C2' C A 6 -5.046 -5.574 13.362 1.00 47.43 C
ATOM 12 O2' C A 6 -5.035 -5.557 11.940 1.00 51.65 O
ATOM 13 C1' C A 6 -3.587 -5.692 13.827 1.00 47.23 C
ATOM 14 N1 C A 6 -3.225 -6.509 14.995 1.00 45.02 N
ATOM 15 C2 C A 6 -1.982 -7.162 14.957 1.00 44.67 C
ATOM 16 O2 C A 6 -1.277 -7.066 13.928 1.00 46.79 O
ATOM 17 N3 C A 6 -1.592 -7.889 16.034 1.00 48.49 N
ATOM 18 C4 C A 6 -2.378 -7.960 17.116 1.00 51.65 C
ATOM 19 N4 C A 6 -1.963 -8.687 18.155 1.00 55.10 N
ATOM 20 C5 C A 6 -3.630 -7.278 17.183 1.00 49.27 C
ATOM 21 C6 C A 6 -4.007 -6.562 16.118 1.00 47.00 C
ATOM 22 P A A 7 -8.031 -4.044 13.286 1.00 43.74 P
ATOM 23 OP1 A A 7 -8.472 -3.679 14.665 1.00 43.94 O
ATOM 24 OP2 A A 7 -8.067 -5.487 12.899 1.00 44.14 O
ATOM 25 O5' A A 7 -8.759 -3.112 12.232 1.00 44.24 O
TER
ATOM 1 O3' C B 3 -11.651 -9.802 20.716 1.00 43.84 O
ATOM 2 P U B 4 -11.327 -8.261 21.059 1.00 45.98 P
ATOM 3 OP1 U B 4 -11.316 -8.199 22.533 1.00 46.20 O
ATOM 4 OP2 U B 4 -12.250 -7.406 20.265 1.00 41.44 O
ATOM 5 O5' U B 4 -9.823 -8.086 20.540 1.00 39.25 O
ATOM 6 C5' U B 4 -8.781 -8.920 21.045 1.00 44.99 C
ATOM 7 C4' U B 4 -7.542 -8.826 20.190 1.00 42.99 C
ATOM 8 O4' U B 4 -7.917 -9.094 18.806 1.00 41.22 O
ATOM 9 C3' U B 4 -6.859 -7.456 20.201 1.00 40.77 C
ATOM 10 O3' U B 4 -5.450 -7.621 20.045 1.00 42.66 O
ATOM 11 C2' U B 4 -7.436 -6.803 18.947 1.00 38.78 C
ATOM 12 O2' U B 4 -6.664 -5.756 18.397 1.00 35.57 O
ATOM 13 C1' U B 4 -7.546 -7.994 17.996 1.00 36.80 C
ATOM 14 N1 U B 4 -8.569 -7.660 16.993 1.00 39.61 N
ATOM 15 C2 U B 4 -8.126 -7.457 15.700 1.00 41.94 C
ATOM 16 O2 U B 4 -6.944 -7.600 15.375 1.00 42.32 O
ATOM 17 N3 U B 4 -9.129 -7.111 14.819 1.00 41.24 N
ATOM 18 C4 U B 4 -10.477 -6.924 15.094 1.00 38.75 C
ATOM 19 O4 U B 4 -11.251 -6.605 14.184 1.00 47.44 O
ATOM 20 C5 U B 4 -10.842 -7.143 16.461 1.00 37.91 C
ATOM 21 C6 U B 4 -9.893 -7.485 17.342 1.00 39.12 C
ATOM 22 P U B 5 -4.398 -7.181 21.175 1.00 49.98 P
ATOM 23 OP1 U B 5 -3.059 -7.687 20.762 1.00 48.36 O
ATOM 24 OP2 U B 5 -4.966 -7.572 22.489 1.00 50.10 O
ATOM 25 O5' U B 5 -4.444 -5.601 21.018 1.00 43.59 O
TER
Atoms:
C2: (-1.982,-7.162,14.957)
OP1: (-2.992,-0.552,17.009)
OP2: (-5.555,-0.652,17.000)
C4: (-2.378,-7.960,17.116)
O5': (-4.212,-2.543,16.086)
C3': (-5.459,-4.204,13.907)
C1': (-3.587,-5.692,13.827)
O4': (-3.140,-4.394,14.162)
C5': (-4.051,-2.212,14.717)
P: (-4.258,-1.338,17.118)
O2: (-1.277,-7.066,13.928)
C4': (-4.161,-3.424,13.832)
C2': (-5.046,-5.574,13.362)
O2': (-5.035,-5.557,11.940)
N1: (-3.225,-6.509,14.995)
N3: (-1.592,-7.889,16.034)
N4: (-1.963,-8.687,18.155)
C6: (-4.007,-6.562,16.118)
C5: (-3.630,-7.278,17.183)
O3': (-6.492,-3.561,13.167)
OP1: (-2.992,-0.552,17.009)
OP2: (-5.555,-0.652,17.000)
C4: (-2.378,-7.960,17.116)
O5': (-4.212,-2.543,16.086)
C3': (-5.459,-4.204,13.907)
C1': (-3.587,-5.692,13.827)
O4': (-3.140,-4.394,14.162)
C5': (-4.051,-2.212,14.717)
P: (-4.258,-1.338,17.118)
O2: (-1.277,-7.066,13.928)
C4': (-4.161,-3.424,13.832)
C2': (-5.046,-5.574,13.362)
O2': (-5.035,-5.557,11.940)
N1: (-3.225,-6.509,14.995)
N3: (-1.592,-7.889,16.034)
N4: (-1.963,-8.687,18.155)
C6: (-4.007,-6.562,16.118)
C5: (-3.630,-7.278,17.183)
O3': (-6.492,-3.561,13.167)
C4: (-10.477,-6.924,15.094)
N3: (-9.129,-7.111,14.819)
OP1: (-11.316,-8.199,22.533)
OP2: (-12.250,-7.406,20.265)
C2: (-8.126,-7.457,15.700)
C1': (-7.546,-7.994,17.996)
C3': (-6.859,-7.456,20.201)
O5': (-9.823,-8.086,20.540)
O4': (-7.917,-9.094,18.806)
C5': (-8.781,-8.920,21.045)
P: (-11.327,-8.261,21.059)
C4': (-7.542,-8.826,20.190)
C2': (-7.436,-6.803,18.947)
O2': (-6.664,-5.756,18.397)
N1: (-8.569,-7.660,16.993)
O4: (-11.251,-6.605,14.184)
O2: (-6.944,-7.600,15.375)
C6: (-9.893,-7.485,17.342)
C5: (-10.842,-7.143,16.461)
O3': (-5.450,-7.621,20.045)
N3: (-9.129,-7.111,14.819)
OP1: (-11.316,-8.199,22.533)
OP2: (-12.250,-7.406,20.265)
C2: (-8.126,-7.457,15.700)
C1': (-7.546,-7.994,17.996)
C3': (-6.859,-7.456,20.201)
O5': (-9.823,-8.086,20.540)
O4': (-7.917,-9.094,18.806)
C5': (-8.781,-8.920,21.045)
P: (-11.327,-8.261,21.059)
C4': (-7.542,-8.826,20.190)
C2': (-7.436,-6.803,18.947)
O2': (-6.664,-5.756,18.397)
N1: (-8.569,-7.660,16.993)
O4: (-11.251,-6.605,14.184)
O2: (-6.944,-7.600,15.375)
C6: (-9.893,-7.485,17.342)
C5: (-10.842,-7.143,16.461)
O3': (-5.450,-7.621,20.045)
Image (generated by PyMOL):