Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:A69:A68
Extra
PDB:
ATOM 1 O3' U A 68 0.036 -55.597 14.137 1.00 69.66 O
ATOM 2 P C A 69 0.518 -57.095 13.830 1.00 71.86 P
ATOM 3 OP1 C A 69 -0.303 -58.056 14.610 1.00 72.26 O
ATOM 4 OP2 C A 69 1.995 -57.114 13.942 1.00 71.70 O
ATOM 5 O5' C A 69 0.148 -57.204 12.273 1.00 72.58 O
ATOM 6 C5' C A 69 -0.235 -58.429 11.641 1.00 73.96 C
ATOM 7 C4' C A 69 -0.349 -58.226 10.139 1.00 74.25 C
ATOM 8 O4' C A 69 -1.628 -57.615 9.820 1.00 73.87 O
ATOM 9 C3' C A 69 0.676 -57.266 9.554 1.00 73.39 C
ATOM 10 O3' C A 69 1.908 -57.904 9.252 1.00 73.69 O
ATOM 11 C2' C A 69 -0.039 -56.741 8.315 1.00 73.91 C
ATOM 12 O2' C A 69 0.008 -57.625 7.210 1.00 75.82 O
ATOM 13 C1' C A 69 -1.464 -56.592 8.849 1.00 73.63 C
ATOM 14 N1 C A 69 -1.724 -55.218 9.446 1.00 72.21 N
ATOM 15 C2 C A 69 -1.630 -54.058 8.644 1.00 71.66 C
ATOM 16 O2 C A 69 -1.342 -54.139 7.442 1.00 72.72 O
ATOM 17 N3 C A 69 -1.857 -52.844 9.209 1.00 69.96 N
ATOM 18 C4 C A 69 -2.167 -52.748 10.501 1.00 69.03 C
ATOM 19 N4 C A 69 -2.379 -51.526 10.988 1.00 67.94 N
ATOM 20 C5 C A 69 -2.270 -53.900 11.341 1.00 69.72 C
ATOM 21 C6 C A 69 -2.043 -55.095 10.776 1.00 71.37 C
ATOM 22 P A A 70 3.257 -57.177 9.707 1.00 72.55 P
ATOM 23 OP1 A A 70 4.401 -58.083 9.468 1.00 73.88 O
ATOM 24 OP2 A A 70 3.027 -56.651 11.070 1.00 72.13 O
ATOM 25 O5' A A 70 3.362 -55.926 8.715 1.00 71.35 O
TER
ATOM 1 O3' C B 67 -5.431 -55.354 17.592 1.00 63.66 O
ATOM 2 P U B 68 -4.104 -55.367 18.488 1.00 64.13 P
ATOM 3 OP1 U B 68 -3.992 -56.688 19.142 1.00 65.23 O
ATOM 4 OP2 U B 68 -4.101 -54.139 19.313 1.00 63.07 O
ATOM 5 O5' U B 68 -2.936 -55.230 17.411 1.00 64.83 O
ATOM 6 C5' U B 68 -2.863 -56.107 16.293 1.00 67.23 C
ATOM 7 C4' U B 68 -2.166 -55.410 15.137 1.00 67.97 C
ATOM 8 O4' U B 68 -2.723 -54.080 14.951 1.00 67.15 O
ATOM 9 C3' U B 68 -0.659 -55.239 15.328 1.00 68.25 C
ATOM 10 O3' U B 68 0.036 -55.597 14.137 1.00 69.66 O
ATOM 11 C2' U B 68 -0.496 -53.754 15.639 1.00 66.77 C
ATOM 12 O2' U B 68 0.711 -53.227 15.135 1.00 66.52 O
ATOM 13 C1' U B 68 -1.679 -53.130 14.900 1.00 66.48 C
ATOM 14 N1 U B 68 -2.127 -51.807 15.471 1.00 65.34 N
ATOM 15 C2 U B 68 -2.180 -50.694 14.645 1.00 64.81 C
ATOM 16 O2 U B 68 -1.890 -50.708 13.464 1.00 65.39 O
ATOM 17 N3 U B 68 -2.588 -49.531 15.253 1.00 63.90 N
ATOM 18 C4 U B 68 -2.944 -49.368 16.579 1.00 63.49 C
ATOM 19 O4 U B 68 -3.288 -48.260 16.973 1.00 63.03 O
ATOM 20 C5 U B 68 -2.868 -50.565 17.383 1.00 64.02 C
ATOM 21 C6 U B 68 -2.471 -51.713 16.812 1.00 64.94 C
ATOM 22 P C B 69 0.518 -57.095 13.830 1.00 71.86 P
ATOM 23 OP1 C B 69 -0.303 -58.056 14.610 1.00 72.26 O
ATOM 24 OP2 C B 69 1.995 -57.114 13.942 1.00 71.70 O
ATOM 25 O5' C B 69 0.148 -57.204 12.273 1.00 72.58 O
TER
ATOM 2 P C A 69 0.518 -57.095 13.830 1.00 71.86 P
ATOM 3 OP1 C A 69 -0.303 -58.056 14.610 1.00 72.26 O
ATOM 4 OP2 C A 69 1.995 -57.114 13.942 1.00 71.70 O
ATOM 5 O5' C A 69 0.148 -57.204 12.273 1.00 72.58 O
ATOM 6 C5' C A 69 -0.235 -58.429 11.641 1.00 73.96 C
ATOM 7 C4' C A 69 -0.349 -58.226 10.139 1.00 74.25 C
ATOM 8 O4' C A 69 -1.628 -57.615 9.820 1.00 73.87 O
ATOM 9 C3' C A 69 0.676 -57.266 9.554 1.00 73.39 C
ATOM 10 O3' C A 69 1.908 -57.904 9.252 1.00 73.69 O
ATOM 11 C2' C A 69 -0.039 -56.741 8.315 1.00 73.91 C
ATOM 12 O2' C A 69 0.008 -57.625 7.210 1.00 75.82 O
ATOM 13 C1' C A 69 -1.464 -56.592 8.849 1.00 73.63 C
ATOM 14 N1 C A 69 -1.724 -55.218 9.446 1.00 72.21 N
ATOM 15 C2 C A 69 -1.630 -54.058 8.644 1.00 71.66 C
ATOM 16 O2 C A 69 -1.342 -54.139 7.442 1.00 72.72 O
ATOM 17 N3 C A 69 -1.857 -52.844 9.209 1.00 69.96 N
ATOM 18 C4 C A 69 -2.167 -52.748 10.501 1.00 69.03 C
ATOM 19 N4 C A 69 -2.379 -51.526 10.988 1.00 67.94 N
ATOM 20 C5 C A 69 -2.270 -53.900 11.341 1.00 69.72 C
ATOM 21 C6 C A 69 -2.043 -55.095 10.776 1.00 71.37 C
ATOM 22 P A A 70 3.257 -57.177 9.707 1.00 72.55 P
ATOM 23 OP1 A A 70 4.401 -58.083 9.468 1.00 73.88 O
ATOM 24 OP2 A A 70 3.027 -56.651 11.070 1.00 72.13 O
ATOM 25 O5' A A 70 3.362 -55.926 8.715 1.00 71.35 O
TER
ATOM 1 O3' C B 67 -5.431 -55.354 17.592 1.00 63.66 O
ATOM 2 P U B 68 -4.104 -55.367 18.488 1.00 64.13 P
ATOM 3 OP1 U B 68 -3.992 -56.688 19.142 1.00 65.23 O
ATOM 4 OP2 U B 68 -4.101 -54.139 19.313 1.00 63.07 O
ATOM 5 O5' U B 68 -2.936 -55.230 17.411 1.00 64.83 O
ATOM 6 C5' U B 68 -2.863 -56.107 16.293 1.00 67.23 C
ATOM 7 C4' U B 68 -2.166 -55.410 15.137 1.00 67.97 C
ATOM 8 O4' U B 68 -2.723 -54.080 14.951 1.00 67.15 O
ATOM 9 C3' U B 68 -0.659 -55.239 15.328 1.00 68.25 C
ATOM 10 O3' U B 68 0.036 -55.597 14.137 1.00 69.66 O
ATOM 11 C2' U B 68 -0.496 -53.754 15.639 1.00 66.77 C
ATOM 12 O2' U B 68 0.711 -53.227 15.135 1.00 66.52 O
ATOM 13 C1' U B 68 -1.679 -53.130 14.900 1.00 66.48 C
ATOM 14 N1 U B 68 -2.127 -51.807 15.471 1.00 65.34 N
ATOM 15 C2 U B 68 -2.180 -50.694 14.645 1.00 64.81 C
ATOM 16 O2 U B 68 -1.890 -50.708 13.464 1.00 65.39 O
ATOM 17 N3 U B 68 -2.588 -49.531 15.253 1.00 63.90 N
ATOM 18 C4 U B 68 -2.944 -49.368 16.579 1.00 63.49 C
ATOM 19 O4 U B 68 -3.288 -48.260 16.973 1.00 63.03 O
ATOM 20 C5 U B 68 -2.868 -50.565 17.383 1.00 64.02 C
ATOM 21 C6 U B 68 -2.471 -51.713 16.812 1.00 64.94 C
ATOM 22 P C B 69 0.518 -57.095 13.830 1.00 71.86 P
ATOM 23 OP1 C B 69 -0.303 -58.056 14.610 1.00 72.26 O
ATOM 24 OP2 C B 69 1.995 -57.114 13.942 1.00 71.70 O
ATOM 25 O5' C B 69 0.148 -57.204 12.273 1.00 72.58 O
TER
Atoms:
C2: (-1.630,-54.058,8.644)
OP1: (-0.303,-58.056,14.610)
OP2: (1.995,-57.114,13.942)
C4: (-2.167,-52.748,10.501)
O5': (0.148,-57.204,12.273)
C3': (0.676,-57.266,9.554)
C1': (-1.464,-56.592,8.849)
O4': (-1.628,-57.615,9.820)
C5': (-0.235,-58.429,11.641)
P: (0.518,-57.095,13.830)
O2: (-1.342,-54.139,7.442)
C4': (-0.349,-58.226,10.139)
C2': (-0.039,-56.741,8.315)
O2': (0.008,-57.625,7.210)
N1: (-1.724,-55.218,9.446)
N3: (-1.857,-52.844,9.209)
N4: (-2.379,-51.526,10.988)
C6: (-2.043,-55.095,10.776)
C5: (-2.270,-53.900,11.341)
O3': (1.908,-57.904,9.252)
OP1: (-0.303,-58.056,14.610)
OP2: (1.995,-57.114,13.942)
C4: (-2.167,-52.748,10.501)
O5': (0.148,-57.204,12.273)
C3': (0.676,-57.266,9.554)
C1': (-1.464,-56.592,8.849)
O4': (-1.628,-57.615,9.820)
C5': (-0.235,-58.429,11.641)
P: (0.518,-57.095,13.830)
O2: (-1.342,-54.139,7.442)
C4': (-0.349,-58.226,10.139)
C2': (-0.039,-56.741,8.315)
O2': (0.008,-57.625,7.210)
N1: (-1.724,-55.218,9.446)
N3: (-1.857,-52.844,9.209)
N4: (-2.379,-51.526,10.988)
C6: (-2.043,-55.095,10.776)
C5: (-2.270,-53.900,11.341)
O3': (1.908,-57.904,9.252)
C4: (-2.944,-49.368,16.579)
N3: (-2.588,-49.531,15.253)
OP1: (-3.992,-56.688,19.142)
OP2: (-4.101,-54.139,19.313)
C2: (-2.180,-50.694,14.645)
C1': (-1.679,-53.130,14.900)
C3': (-0.659,-55.239,15.328)
O5': (-2.936,-55.230,17.411)
O4': (-2.723,-54.080,14.951)
C5': (-2.863,-56.107,16.293)
P: (-4.104,-55.367,18.488)
C4': (-2.166,-55.410,15.137)
C2': (-0.496,-53.754,15.639)
O2': (0.711,-53.227,15.135)
N1: (-2.127,-51.807,15.471)
O4: (-3.288,-48.260,16.973)
O2: (-1.890,-50.708,13.464)
C6: (-2.471,-51.713,16.812)
C5: (-2.868,-50.565,17.383)
O3': (0.036,-55.597,14.137)
N3: (-2.588,-49.531,15.253)
OP1: (-3.992,-56.688,19.142)
OP2: (-4.101,-54.139,19.313)
C2: (-2.180,-50.694,14.645)
C1': (-1.679,-53.130,14.900)
C3': (-0.659,-55.239,15.328)
O5': (-2.936,-55.230,17.411)
O4': (-2.723,-54.080,14.951)
C5': (-2.863,-56.107,16.293)
P: (-4.104,-55.367,18.488)
C4': (-2.166,-55.410,15.137)
C2': (-0.496,-53.754,15.639)
O2': (0.711,-53.227,15.135)
N1: (-2.127,-51.807,15.471)
O4: (-3.288,-48.260,16.973)
O2: (-1.890,-50.708,13.464)
C6: (-2.471,-51.713,16.812)
C5: (-2.868,-50.565,17.383)
O3': (0.036,-55.597,14.137)
Image (generated by PyMOL):