Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:B69:B68
Extra
PDB:
ATOM 1 O3' U A 68 -1.661 -24.597 32.495 1.00 61.25 O
ATOM 2 P C A 69 -1.518 -23.655 33.780 1.00 61.65 P
ATOM 3 OP1 C A 69 -0.081 -23.387 34.035 1.00 60.98 O
ATOM 4 OP2 C A 69 -2.371 -24.252 34.837 1.00 61.57 O
ATOM 5 O5' C A 69 -2.214 -22.308 33.253 1.00 61.69 O
ATOM 6 C5' C A 69 -2.469 -21.202 34.112 1.00 61.47 C
ATOM 7 C4' C A 69 -3.707 -20.440 33.667 1.00 61.36 C
ATOM 8 O4' C A 69 -3.594 -20.025 32.277 1.00 61.32 O
ATOM 9 C3' C A 69 -4.999 -21.240 33.704 1.00 60.80 C
ATOM 10 O3' C A 69 -5.534 -21.273 35.016 1.00 61.03 O
ATOM 11 C2' C A 69 -5.867 -20.457 32.721 1.00 61.05 C
ATOM 12 O2' C A 69 -6.436 -19.276 33.248 1.00 61.50 O
ATOM 13 C1' C A 69 -4.855 -20.128 31.625 1.00 61.09 C
ATOM 14 N1 C A 69 -4.842 -21.192 30.541 1.00 60.24 N
ATOM 15 C2 C A 69 -5.940 -21.344 29.666 1.00 60.06 C
ATOM 16 O2 C A 69 -6.926 -20.600 29.758 1.00 60.63 O
ATOM 17 N3 C A 69 -5.898 -22.319 28.719 1.00 59.28 N
ATOM 18 C4 C A 69 -4.835 -23.119 28.622 1.00 58.79 C
ATOM 19 N4 C A 69 -4.843 -24.058 27.675 1.00 58.37 N
ATOM 20 C5 C A 69 -3.713 -22.992 29.494 1.00 59.02 C
ATOM 21 C6 C A 69 -3.763 -22.029 30.423 1.00 59.63 C
ATOM 22 P A A 70 -6.161 -22.634 35.587 1.00 61.19 P
ATOM 23 OP1 A A 70 -6.575 -22.402 36.989 1.00 61.76 O
ATOM 24 OP2 A A 70 -5.235 -23.756 35.295 1.00 60.58 O
ATOM 25 O5' A A 70 -7.476 -22.800 34.686 1.00 60.81 O
TER
ATOM 1 O3' C B 67 3.624 -24.456 28.659 1.00 58.89 O
ATOM 2 P U B 68 3.609 -25.602 29.776 1.00 58.77 P
ATOM 3 OP1 U B 68 4.554 -25.197 30.839 1.00 59.09 O
ATOM 4 OP2 U B 68 3.772 -26.919 29.122 1.00 58.12 O
ATOM 5 O5' U B 68 2.115 -25.517 30.335 1.00 58.80 O
ATOM 6 C5' U B 68 1.613 -24.294 30.860 1.00 59.58 C
ATOM 7 C4' U B 68 0.097 -24.306 30.847 1.00 60.06 C
ATOM 8 O4' U B 68 -0.374 -24.752 29.550 1.00 59.84 O
ATOM 9 C3' U B 68 -0.537 -25.230 31.884 1.00 60.20 C
ATOM 10 O3' U B 68 -1.661 -24.597 32.495 1.00 61.25 O
ATOM 11 C2' U B 68 -0.976 -26.437 31.064 1.00 59.40 C
ATOM 12 O2' U B 68 -2.124 -27.065 31.600 1.00 59.72 O
ATOM 13 C1' U B 68 -1.306 -25.798 29.718 1.00 59.25 C
ATOM 14 N1 U B 68 -1.221 -26.762 28.568 1.00 58.47 N
ATOM 15 C2 U B 68 -2.326 -26.944 27.751 1.00 58.08 C
ATOM 16 O2 U B 68 -3.384 -26.357 27.896 1.00 58.37 O
ATOM 17 N3 U B 68 -2.146 -27.855 26.738 1.00 57.34 N
ATOM 18 C4 U B 68 -1.002 -28.585 26.468 1.00 56.79 C
ATOM 19 O4 U B 68 -0.995 -29.363 25.525 1.00 56.78 O
ATOM 20 C5 U B 68 0.107 -28.348 27.356 1.00 56.80 C
ATOM 21 C6 U B 68 -0.043 -27.464 28.351 1.00 57.77 C
ATOM 22 P C B 69 -1.518 -23.655 33.780 1.00 61.65 P
ATOM 23 OP1 C B 69 -0.081 -23.387 34.035 1.00 60.98 O
ATOM 24 OP2 C B 69 -2.371 -24.252 34.837 1.00 61.57 O
ATOM 25 O5' C B 69 -2.214 -22.308 33.253 1.00 61.69 O
TER
ATOM 2 P C A 69 -1.518 -23.655 33.780 1.00 61.65 P
ATOM 3 OP1 C A 69 -0.081 -23.387 34.035 1.00 60.98 O
ATOM 4 OP2 C A 69 -2.371 -24.252 34.837 1.00 61.57 O
ATOM 5 O5' C A 69 -2.214 -22.308 33.253 1.00 61.69 O
ATOM 6 C5' C A 69 -2.469 -21.202 34.112 1.00 61.47 C
ATOM 7 C4' C A 69 -3.707 -20.440 33.667 1.00 61.36 C
ATOM 8 O4' C A 69 -3.594 -20.025 32.277 1.00 61.32 O
ATOM 9 C3' C A 69 -4.999 -21.240 33.704 1.00 60.80 C
ATOM 10 O3' C A 69 -5.534 -21.273 35.016 1.00 61.03 O
ATOM 11 C2' C A 69 -5.867 -20.457 32.721 1.00 61.05 C
ATOM 12 O2' C A 69 -6.436 -19.276 33.248 1.00 61.50 O
ATOM 13 C1' C A 69 -4.855 -20.128 31.625 1.00 61.09 C
ATOM 14 N1 C A 69 -4.842 -21.192 30.541 1.00 60.24 N
ATOM 15 C2 C A 69 -5.940 -21.344 29.666 1.00 60.06 C
ATOM 16 O2 C A 69 -6.926 -20.600 29.758 1.00 60.63 O
ATOM 17 N3 C A 69 -5.898 -22.319 28.719 1.00 59.28 N
ATOM 18 C4 C A 69 -4.835 -23.119 28.622 1.00 58.79 C
ATOM 19 N4 C A 69 -4.843 -24.058 27.675 1.00 58.37 N
ATOM 20 C5 C A 69 -3.713 -22.992 29.494 1.00 59.02 C
ATOM 21 C6 C A 69 -3.763 -22.029 30.423 1.00 59.63 C
ATOM 22 P A A 70 -6.161 -22.634 35.587 1.00 61.19 P
ATOM 23 OP1 A A 70 -6.575 -22.402 36.989 1.00 61.76 O
ATOM 24 OP2 A A 70 -5.235 -23.756 35.295 1.00 60.58 O
ATOM 25 O5' A A 70 -7.476 -22.800 34.686 1.00 60.81 O
TER
ATOM 1 O3' C B 67 3.624 -24.456 28.659 1.00 58.89 O
ATOM 2 P U B 68 3.609 -25.602 29.776 1.00 58.77 P
ATOM 3 OP1 U B 68 4.554 -25.197 30.839 1.00 59.09 O
ATOM 4 OP2 U B 68 3.772 -26.919 29.122 1.00 58.12 O
ATOM 5 O5' U B 68 2.115 -25.517 30.335 1.00 58.80 O
ATOM 6 C5' U B 68 1.613 -24.294 30.860 1.00 59.58 C
ATOM 7 C4' U B 68 0.097 -24.306 30.847 1.00 60.06 C
ATOM 8 O4' U B 68 -0.374 -24.752 29.550 1.00 59.84 O
ATOM 9 C3' U B 68 -0.537 -25.230 31.884 1.00 60.20 C
ATOM 10 O3' U B 68 -1.661 -24.597 32.495 1.00 61.25 O
ATOM 11 C2' U B 68 -0.976 -26.437 31.064 1.00 59.40 C
ATOM 12 O2' U B 68 -2.124 -27.065 31.600 1.00 59.72 O
ATOM 13 C1' U B 68 -1.306 -25.798 29.718 1.00 59.25 C
ATOM 14 N1 U B 68 -1.221 -26.762 28.568 1.00 58.47 N
ATOM 15 C2 U B 68 -2.326 -26.944 27.751 1.00 58.08 C
ATOM 16 O2 U B 68 -3.384 -26.357 27.896 1.00 58.37 O
ATOM 17 N3 U B 68 -2.146 -27.855 26.738 1.00 57.34 N
ATOM 18 C4 U B 68 -1.002 -28.585 26.468 1.00 56.79 C
ATOM 19 O4 U B 68 -0.995 -29.363 25.525 1.00 56.78 O
ATOM 20 C5 U B 68 0.107 -28.348 27.356 1.00 56.80 C
ATOM 21 C6 U B 68 -0.043 -27.464 28.351 1.00 57.77 C
ATOM 22 P C B 69 -1.518 -23.655 33.780 1.00 61.65 P
ATOM 23 OP1 C B 69 -0.081 -23.387 34.035 1.00 60.98 O
ATOM 24 OP2 C B 69 -2.371 -24.252 34.837 1.00 61.57 O
ATOM 25 O5' C B 69 -2.214 -22.308 33.253 1.00 61.69 O
TER
Atoms:
C2: (-5.940,-21.344,29.666)
OP1: (-0.081,-23.387,34.035)
OP2: (-2.371,-24.252,34.837)
C4: (-4.835,-23.119,28.622)
O5': (-2.214,-22.308,33.253)
C3': (-4.999,-21.240,33.704)
C1': (-4.855,-20.128,31.625)
O4': (-3.594,-20.025,32.277)
C5': (-2.469,-21.202,34.112)
P: (-1.518,-23.655,33.780)
O2: (-6.926,-20.600,29.758)
C4': (-3.707,-20.440,33.667)
C2': (-5.867,-20.457,32.721)
O2': (-6.436,-19.276,33.248)
N1: (-4.842,-21.192,30.541)
N3: (-5.898,-22.319,28.719)
N4: (-4.843,-24.058,27.675)
C6: (-3.763,-22.029,30.423)
C5: (-3.713,-22.992,29.494)
O3': (-5.534,-21.273,35.016)
OP1: (-0.081,-23.387,34.035)
OP2: (-2.371,-24.252,34.837)
C4: (-4.835,-23.119,28.622)
O5': (-2.214,-22.308,33.253)
C3': (-4.999,-21.240,33.704)
C1': (-4.855,-20.128,31.625)
O4': (-3.594,-20.025,32.277)
C5': (-2.469,-21.202,34.112)
P: (-1.518,-23.655,33.780)
O2: (-6.926,-20.600,29.758)
C4': (-3.707,-20.440,33.667)
C2': (-5.867,-20.457,32.721)
O2': (-6.436,-19.276,33.248)
N1: (-4.842,-21.192,30.541)
N3: (-5.898,-22.319,28.719)
N4: (-4.843,-24.058,27.675)
C6: (-3.763,-22.029,30.423)
C5: (-3.713,-22.992,29.494)
O3': (-5.534,-21.273,35.016)
C4: (-1.002,-28.585,26.468)
N3: (-2.146,-27.855,26.738)
OP1: (4.554,-25.197,30.839)
OP2: (3.772,-26.919,29.122)
C2: (-2.326,-26.944,27.751)
C1': (-1.306,-25.798,29.718)
C3': (-0.537,-25.230,31.884)
O5': (2.115,-25.517,30.335)
O4': (-0.374,-24.752,29.550)
C5': (1.613,-24.294,30.860)
P: (3.609,-25.602,29.776)
C4': (0.097,-24.306,30.847)
C2': (-0.976,-26.437,31.064)
O2': (-2.124,-27.065,31.600)
N1: (-1.221,-26.762,28.568)
O4: (-0.995,-29.363,25.525)
O2: (-3.384,-26.357,27.896)
C6: (-0.043,-27.464,28.351)
C5: (0.107,-28.348,27.356)
O3': (-1.661,-24.597,32.495)
N3: (-2.146,-27.855,26.738)
OP1: (4.554,-25.197,30.839)
OP2: (3.772,-26.919,29.122)
C2: (-2.326,-26.944,27.751)
C1': (-1.306,-25.798,29.718)
C3': (-0.537,-25.230,31.884)
O5': (2.115,-25.517,30.335)
O4': (-0.374,-24.752,29.550)
C5': (1.613,-24.294,30.860)
P: (3.609,-25.602,29.776)
C4': (0.097,-24.306,30.847)
C2': (-0.976,-26.437,31.064)
O2': (-2.124,-27.065,31.600)
N1: (-1.221,-26.762,28.568)
O4: (-0.995,-29.363,25.525)
O2: (-3.384,-26.357,27.896)
C6: (-0.043,-27.464,28.351)
C5: (0.107,-28.348,27.356)
O3': (-1.661,-24.597,32.495)
Image (generated by PyMOL):