Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A116:A114
Extra
PDB:
ATOM 1 O3' G A 115 42.632 85.657 20.769 1.00 40.35 O
ATOM 2 P C A 116 42.530 84.531 19.625 1.00 43.43 P
ATOM 3 OP1 C A 116 41.244 83.843 19.898 1.00 46.13 O
ATOM 4 OP2 C A 116 43.794 83.755 19.582 1.00 45.92 O
ATOM 5 O5' C A 116 42.478 85.333 18.266 1.00 45.09 O
ATOM 6 C5' C A 116 41.484 86.290 17.942 1.00 46.35 C
ATOM 7 C4' C A 116 41.867 86.987 16.663 1.00 44.83 C
ATOM 8 O4' C A 116 43.132 87.673 16.852 1.00 44.24 O
ATOM 9 C3' C A 116 42.143 86.080 15.473 1.00 48.57 C
ATOM 10 O3' C A 116 40.978 85.634 14.806 1.00 53.17 O
ATOM 11 C2' C A 116 43.026 86.948 14.594 1.00 47.32 C
ATOM 12 O2' C A 116 42.239 87.919 13.921 1.00 48.15 O
ATOM 13 C1' C A 116 43.874 87.653 15.650 1.00 43.73 C
ATOM 14 N1 C A 116 45.154 86.931 15.760 1.00 43.32 N
ATOM 15 C2 C A 116 46.041 87.166 14.712 1.00 44.71 C
ATOM 16 O2 C A 116 45.692 87.951 13.820 1.00 48.67 O
ATOM 17 N3 C A 116 47.240 86.554 14.685 1.00 45.32 N
ATOM 18 C4 C A 116 47.574 85.722 15.665 1.00 43.51 C
ATOM 19 N4 C A 116 48.778 85.159 15.561 1.00 37.24 N
ATOM 20 C5 C A 116 46.685 85.450 16.759 1.00 40.12 C
ATOM 21 C6 C A 116 45.484 86.066 16.770 1.00 43.55 C
ATOM 22 P U A 117 41.040 84.251 13.991 1.00 54.78 P
ATOM 23 OP1 U A 117 39.646 84.079 13.504 1.00 62.72 O
ATOM 24 OP2 U A 117 41.633 83.263 14.930 1.00 55.01 O
ATOM 25 O5' U A 117 42.029 84.474 12.760 1.00 51.37 O
TER
ATOM 1 O3' A B 113 47.422 76.956 21.545 1.00 26.63 O
ATOM 2 P U B 114 47.395 77.637 23.013 1.00 28.35 P
ATOM 3 OP1 U B 114 48.347 76.917 23.890 1.00 24.97 O
ATOM 4 OP2 U B 114 45.967 77.720 23.387 1.00 28.48 O
ATOM 5 O5' U B 114 47.981 79.085 22.748 1.00 27.60 O
ATOM 6 C5' U B 114 47.132 80.150 22.334 1.00 31.06 C
ATOM 7 C4' U B 114 47.905 81.413 22.046 1.00 34.05 C
ATOM 8 O4' U B 114 48.740 81.217 20.871 1.00 32.29 O
ATOM 9 C3' U B 114 47.029 82.615 21.718 1.00 33.86 C
ATOM 10 O3' U B 114 47.745 83.801 22.055 1.00 31.02 O
ATOM 11 C2' U B 114 46.914 82.488 20.205 1.00 36.59 C
ATOM 12 O2' U B 114 46.467 83.625 19.497 1.00 36.87 O
ATOM 13 C1' U B 114 48.353 82.143 19.871 1.00 35.64 C
ATOM 14 N1 U B 114 48.355 81.525 18.545 1.00 39.72 N
ATOM 15 C2 U B 114 48.980 82.197 17.519 1.00 39.21 C
ATOM 16 O2 U B 114 49.541 83.259 17.686 1.00 38.00 O
ATOM 17 N3 U B 114 48.940 81.561 16.304 1.00 46.29 N
ATOM 18 C4 U B 114 48.317 80.355 16.023 1.00 50.39 C
ATOM 19 O4 U B 114 48.343 79.891 14.878 1.00 53.23 O
ATOM 20 C5 U B 114 47.673 79.738 17.143 1.00 47.48 C
ATOM 21 C6 U B 114 47.710 80.333 18.340 1.00 44.72 C
ATOM 22 P G B 115 47.135 84.729 23.203 1.00 32.07 P
ATOM 23 OP1 G B 115 48.064 85.865 23.414 1.00 34.17 O
ATOM 24 OP2 G B 115 46.741 83.867 24.346 1.00 34.65 O
ATOM 25 O5' G B 115 45.811 85.222 22.469 1.00 37.11 O
TER
ATOM 2 P C A 116 42.530 84.531 19.625 1.00 43.43 P
ATOM 3 OP1 C A 116 41.244 83.843 19.898 1.00 46.13 O
ATOM 4 OP2 C A 116 43.794 83.755 19.582 1.00 45.92 O
ATOM 5 O5' C A 116 42.478 85.333 18.266 1.00 45.09 O
ATOM 6 C5' C A 116 41.484 86.290 17.942 1.00 46.35 C
ATOM 7 C4' C A 116 41.867 86.987 16.663 1.00 44.83 C
ATOM 8 O4' C A 116 43.132 87.673 16.852 1.00 44.24 O
ATOM 9 C3' C A 116 42.143 86.080 15.473 1.00 48.57 C
ATOM 10 O3' C A 116 40.978 85.634 14.806 1.00 53.17 O
ATOM 11 C2' C A 116 43.026 86.948 14.594 1.00 47.32 C
ATOM 12 O2' C A 116 42.239 87.919 13.921 1.00 48.15 O
ATOM 13 C1' C A 116 43.874 87.653 15.650 1.00 43.73 C
ATOM 14 N1 C A 116 45.154 86.931 15.760 1.00 43.32 N
ATOM 15 C2 C A 116 46.041 87.166 14.712 1.00 44.71 C
ATOM 16 O2 C A 116 45.692 87.951 13.820 1.00 48.67 O
ATOM 17 N3 C A 116 47.240 86.554 14.685 1.00 45.32 N
ATOM 18 C4 C A 116 47.574 85.722 15.665 1.00 43.51 C
ATOM 19 N4 C A 116 48.778 85.159 15.561 1.00 37.24 N
ATOM 20 C5 C A 116 46.685 85.450 16.759 1.00 40.12 C
ATOM 21 C6 C A 116 45.484 86.066 16.770 1.00 43.55 C
ATOM 22 P U A 117 41.040 84.251 13.991 1.00 54.78 P
ATOM 23 OP1 U A 117 39.646 84.079 13.504 1.00 62.72 O
ATOM 24 OP2 U A 117 41.633 83.263 14.930 1.00 55.01 O
ATOM 25 O5' U A 117 42.029 84.474 12.760 1.00 51.37 O
TER
ATOM 1 O3' A B 113 47.422 76.956 21.545 1.00 26.63 O
ATOM 2 P U B 114 47.395 77.637 23.013 1.00 28.35 P
ATOM 3 OP1 U B 114 48.347 76.917 23.890 1.00 24.97 O
ATOM 4 OP2 U B 114 45.967 77.720 23.387 1.00 28.48 O
ATOM 5 O5' U B 114 47.981 79.085 22.748 1.00 27.60 O
ATOM 6 C5' U B 114 47.132 80.150 22.334 1.00 31.06 C
ATOM 7 C4' U B 114 47.905 81.413 22.046 1.00 34.05 C
ATOM 8 O4' U B 114 48.740 81.217 20.871 1.00 32.29 O
ATOM 9 C3' U B 114 47.029 82.615 21.718 1.00 33.86 C
ATOM 10 O3' U B 114 47.745 83.801 22.055 1.00 31.02 O
ATOM 11 C2' U B 114 46.914 82.488 20.205 1.00 36.59 C
ATOM 12 O2' U B 114 46.467 83.625 19.497 1.00 36.87 O
ATOM 13 C1' U B 114 48.353 82.143 19.871 1.00 35.64 C
ATOM 14 N1 U B 114 48.355 81.525 18.545 1.00 39.72 N
ATOM 15 C2 U B 114 48.980 82.197 17.519 1.00 39.21 C
ATOM 16 O2 U B 114 49.541 83.259 17.686 1.00 38.00 O
ATOM 17 N3 U B 114 48.940 81.561 16.304 1.00 46.29 N
ATOM 18 C4 U B 114 48.317 80.355 16.023 1.00 50.39 C
ATOM 19 O4 U B 114 48.343 79.891 14.878 1.00 53.23 O
ATOM 20 C5 U B 114 47.673 79.738 17.143 1.00 47.48 C
ATOM 21 C6 U B 114 47.710 80.333 18.340 1.00 44.72 C
ATOM 22 P G B 115 47.135 84.729 23.203 1.00 32.07 P
ATOM 23 OP1 G B 115 48.064 85.865 23.414 1.00 34.17 O
ATOM 24 OP2 G B 115 46.741 83.867 24.346 1.00 34.65 O
ATOM 25 O5' G B 115 45.811 85.222 22.469 1.00 37.11 O
TER
Atoms:
C2: (46.041,87.166,14.712)
OP1: (41.244,83.843,19.898)
OP2: (43.794,83.755,19.582)
C4: (47.574,85.722,15.665)
O5': (42.478,85.333,18.266)
C3': (42.143,86.080,15.473)
C1': (43.874,87.653,15.650)
O4': (43.132,87.673,16.852)
C5': (41.484,86.290,17.942)
P: (42.530,84.531,19.625)
O2: (45.692,87.951,13.820)
C4': (41.867,86.987,16.663)
C2': (43.026,86.948,14.594)
O2': (42.239,87.919,13.921)
N1: (45.154,86.931,15.760)
N3: (47.240,86.554,14.685)
N4: (48.778,85.159,15.561)
C6: (45.484,86.066,16.770)
C5: (46.685,85.450,16.759)
O3': (40.978,85.634,14.806)
OP1: (41.244,83.843,19.898)
OP2: (43.794,83.755,19.582)
C4: (47.574,85.722,15.665)
O5': (42.478,85.333,18.266)
C3': (42.143,86.080,15.473)
C1': (43.874,87.653,15.650)
O4': (43.132,87.673,16.852)
C5': (41.484,86.290,17.942)
P: (42.530,84.531,19.625)
O2: (45.692,87.951,13.820)
C4': (41.867,86.987,16.663)
C2': (43.026,86.948,14.594)
O2': (42.239,87.919,13.921)
N1: (45.154,86.931,15.760)
N3: (47.240,86.554,14.685)
N4: (48.778,85.159,15.561)
C6: (45.484,86.066,16.770)
C5: (46.685,85.450,16.759)
O3': (40.978,85.634,14.806)
C4: (48.317,80.355,16.023)
N3: (48.940,81.561,16.304)
OP1: (48.347,76.917,23.890)
OP2: (45.967,77.720,23.387)
C2: (48.980,82.197,17.519)
C1': (48.353,82.143,19.871)
C3': (47.029,82.615,21.718)
O5': (47.981,79.085,22.748)
O4': (48.740,81.217,20.871)
C5': (47.132,80.150,22.334)
P: (47.395,77.637,23.013)
C4': (47.905,81.413,22.046)
C2': (46.914,82.488,20.205)
O2': (46.467,83.625,19.497)
N1: (48.355,81.525,18.545)
O4: (48.343,79.891,14.878)
O2: (49.541,83.259,17.686)
C6: (47.710,80.333,18.340)
C5: (47.673,79.738,17.143)
O3': (47.745,83.801,22.055)
N3: (48.940,81.561,16.304)
OP1: (48.347,76.917,23.890)
OP2: (45.967,77.720,23.387)
C2: (48.980,82.197,17.519)
C1': (48.353,82.143,19.871)
C3': (47.029,82.615,21.718)
O5': (47.981,79.085,22.748)
O4': (48.740,81.217,20.871)
C5': (47.132,80.150,22.334)
P: (47.395,77.637,23.013)
C4': (47.905,81.413,22.046)
C2': (46.914,82.488,20.205)
O2': (46.467,83.625,19.497)
N1: (48.355,81.525,18.545)
O4: (48.343,79.891,14.878)
O2: (49.541,83.259,17.686)
C6: (47.710,80.333,18.340)
C5: (47.673,79.738,17.143)
O3': (47.745,83.801,22.055)
Image (generated by PyMOL):