Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A20:A19
Extra
PDB:
ATOM 1 O3' U A 19 26.007 51.099 22.124 1.00 28.38 O
ATOM 2 P C A 20 26.328 52.427 21.259 1.00 31.29 P
ATOM 3 OP1 C A 20 26.677 51.956 19.901 1.00 37.52 O
ATOM 4 OP2 C A 20 27.309 53.118 22.115 1.00 31.19 O
ATOM 5 O5' C A 20 25.031 53.284 21.115 1.00 32.65 O
ATOM 6 C5' C A 20 24.206 53.333 22.247 1.00 30.33 C
ATOM 7 C4' C A 20 23.804 54.730 22.601 1.00 28.58 C
ATOM 8 O4' C A 20 22.486 54.525 23.160 1.00 30.86 O
ATOM 9 C3' C A 20 24.667 55.357 23.700 1.00 30.15 C
ATOM 10 O3' C A 20 25.305 56.594 23.356 1.00 31.04 O
ATOM 11 C2' C A 20 23.732 55.536 24.893 1.00 29.23 C
ATOM 12 O2' C A 20 23.356 56.890 25.048 1.00 29.01 O
ATOM 13 C1' C A 20 22.484 54.731 24.550 1.00 28.65 C
ATOM 14 N1 C A 20 22.778 53.398 25.160 1.00 27.96 N
ATOM 15 C2 C A 20 22.776 53.294 26.551 1.00 27.10 C
ATOM 16 O2 C A 20 22.502 54.307 27.205 1.00 27.94 O
ATOM 17 N3 C A 20 23.068 52.114 27.155 1.00 24.89 N
ATOM 18 C4 C A 20 23.364 51.038 26.434 1.00 26.63 C
ATOM 19 N4 C A 20 23.653 49.903 27.092 1.00 26.30 N
ATOM 20 C5 C A 20 23.384 51.099 25.009 1.00 24.80 C
ATOM 21 C6 C A 20 23.093 52.279 24.434 1.00 26.22 C
ATOM 22 P C A 21 26.838 56.831 23.859 1.00 31.14 P
ATOM 23 OP1 C A 21 27.109 58.278 23.635 1.00 35.01 O
ATOM 24 OP2 C A 21 27.723 55.838 23.223 1.00 33.34 O
ATOM 25 O5' C A 21 26.878 56.484 25.407 1.00 28.21 O
TER
ATOM 1 O3' C B 18 23.754 46.757 17.741 1.00 22.16 O
ATOM 2 P U B 19 25.237 47.300 18.072 1.00 24.28 P
ATOM 3 OP1 U B 19 25.412 48.406 17.113 1.00 22.87 O
ATOM 4 OP2 U B 19 26.188 46.180 18.098 1.00 22.67 O
ATOM 5 O5' U B 19 25.079 47.900 19.545 1.00 21.09 O
ATOM 6 C5' U B 19 24.137 48.923 19.827 1.00 22.66 C
ATOM 7 C4' U B 19 24.409 49.545 21.172 1.00 22.04 C
ATOM 8 O4' U B 19 23.965 48.636 22.217 1.00 23.50 O
ATOM 9 C3' U B 19 25.884 49.847 21.439 1.00 25.22 C
ATOM 10 O3' U B 19 26.007 51.099 22.124 1.00 28.38 O
ATOM 11 C2' U B 19 26.310 48.693 22.340 1.00 26.31 C
ATOM 12 O2' U B 19 27.382 49.009 23.209 1.00 27.42 O
ATOM 13 C1' U B 19 25.025 48.365 23.105 1.00 22.81 C
ATOM 14 N1 U B 19 25.104 46.949 23.515 1.00 22.90 N
ATOM 15 C2 U B 19 24.962 46.659 24.859 1.00 21.48 C
ATOM 16 O2 U B 19 24.710 47.508 25.703 1.00 21.91 O
ATOM 17 N3 U B 19 25.104 45.333 25.179 1.00 20.94 N
ATOM 18 C4 U B 19 25.388 44.297 24.310 1.00 19.91 C
ATOM 19 O4 U B 19 25.503 43.162 24.749 1.00 20.87 O
ATOM 20 C5 U B 19 25.525 44.676 22.937 1.00 21.40 C
ATOM 21 C6 U B 19 25.389 45.963 22.598 1.00 22.07 C
ATOM 22 P C B 20 26.328 52.427 21.259 1.00 31.29 P
ATOM 23 OP1 C B 20 26.677 51.956 19.901 1.00 37.52 O
ATOM 24 OP2 C B 20 27.309 53.118 22.115 1.00 31.19 O
ATOM 25 O5' C B 20 25.031 53.284 21.115 1.00 32.65 O
TER
ATOM 2 P C A 20 26.328 52.427 21.259 1.00 31.29 P
ATOM 3 OP1 C A 20 26.677 51.956 19.901 1.00 37.52 O
ATOM 4 OP2 C A 20 27.309 53.118 22.115 1.00 31.19 O
ATOM 5 O5' C A 20 25.031 53.284 21.115 1.00 32.65 O
ATOM 6 C5' C A 20 24.206 53.333 22.247 1.00 30.33 C
ATOM 7 C4' C A 20 23.804 54.730 22.601 1.00 28.58 C
ATOM 8 O4' C A 20 22.486 54.525 23.160 1.00 30.86 O
ATOM 9 C3' C A 20 24.667 55.357 23.700 1.00 30.15 C
ATOM 10 O3' C A 20 25.305 56.594 23.356 1.00 31.04 O
ATOM 11 C2' C A 20 23.732 55.536 24.893 1.00 29.23 C
ATOM 12 O2' C A 20 23.356 56.890 25.048 1.00 29.01 O
ATOM 13 C1' C A 20 22.484 54.731 24.550 1.00 28.65 C
ATOM 14 N1 C A 20 22.778 53.398 25.160 1.00 27.96 N
ATOM 15 C2 C A 20 22.776 53.294 26.551 1.00 27.10 C
ATOM 16 O2 C A 20 22.502 54.307 27.205 1.00 27.94 O
ATOM 17 N3 C A 20 23.068 52.114 27.155 1.00 24.89 N
ATOM 18 C4 C A 20 23.364 51.038 26.434 1.00 26.63 C
ATOM 19 N4 C A 20 23.653 49.903 27.092 1.00 26.30 N
ATOM 20 C5 C A 20 23.384 51.099 25.009 1.00 24.80 C
ATOM 21 C6 C A 20 23.093 52.279 24.434 1.00 26.22 C
ATOM 22 P C A 21 26.838 56.831 23.859 1.00 31.14 P
ATOM 23 OP1 C A 21 27.109 58.278 23.635 1.00 35.01 O
ATOM 24 OP2 C A 21 27.723 55.838 23.223 1.00 33.34 O
ATOM 25 O5' C A 21 26.878 56.484 25.407 1.00 28.21 O
TER
ATOM 1 O3' C B 18 23.754 46.757 17.741 1.00 22.16 O
ATOM 2 P U B 19 25.237 47.300 18.072 1.00 24.28 P
ATOM 3 OP1 U B 19 25.412 48.406 17.113 1.00 22.87 O
ATOM 4 OP2 U B 19 26.188 46.180 18.098 1.00 22.67 O
ATOM 5 O5' U B 19 25.079 47.900 19.545 1.00 21.09 O
ATOM 6 C5' U B 19 24.137 48.923 19.827 1.00 22.66 C
ATOM 7 C4' U B 19 24.409 49.545 21.172 1.00 22.04 C
ATOM 8 O4' U B 19 23.965 48.636 22.217 1.00 23.50 O
ATOM 9 C3' U B 19 25.884 49.847 21.439 1.00 25.22 C
ATOM 10 O3' U B 19 26.007 51.099 22.124 1.00 28.38 O
ATOM 11 C2' U B 19 26.310 48.693 22.340 1.00 26.31 C
ATOM 12 O2' U B 19 27.382 49.009 23.209 1.00 27.42 O
ATOM 13 C1' U B 19 25.025 48.365 23.105 1.00 22.81 C
ATOM 14 N1 U B 19 25.104 46.949 23.515 1.00 22.90 N
ATOM 15 C2 U B 19 24.962 46.659 24.859 1.00 21.48 C
ATOM 16 O2 U B 19 24.710 47.508 25.703 1.00 21.91 O
ATOM 17 N3 U B 19 25.104 45.333 25.179 1.00 20.94 N
ATOM 18 C4 U B 19 25.388 44.297 24.310 1.00 19.91 C
ATOM 19 O4 U B 19 25.503 43.162 24.749 1.00 20.87 O
ATOM 20 C5 U B 19 25.525 44.676 22.937 1.00 21.40 C
ATOM 21 C6 U B 19 25.389 45.963 22.598 1.00 22.07 C
ATOM 22 P C B 20 26.328 52.427 21.259 1.00 31.29 P
ATOM 23 OP1 C B 20 26.677 51.956 19.901 1.00 37.52 O
ATOM 24 OP2 C B 20 27.309 53.118 22.115 1.00 31.19 O
ATOM 25 O5' C B 20 25.031 53.284 21.115 1.00 32.65 O
TER
Atoms:
C2: (22.776,53.294,26.551)
OP1: (26.677,51.956,19.901)
OP2: (27.309,53.118,22.115)
C4: (23.364,51.038,26.434)
O5': (25.031,53.284,21.115)
C3': (24.667,55.357,23.700)
C1': (22.484,54.731,24.550)
O4': (22.486,54.525,23.160)
C5': (24.206,53.333,22.247)
P: (26.328,52.427,21.259)
O2: (22.502,54.307,27.205)
C4': (23.804,54.730,22.601)
C2': (23.732,55.536,24.893)
O2': (23.356,56.890,25.048)
N1: (22.778,53.398,25.160)
N3: (23.068,52.114,27.155)
N4: (23.653,49.903,27.092)
C6: (23.093,52.279,24.434)
C5: (23.384,51.099,25.009)
O3': (25.305,56.594,23.356)
OP1: (26.677,51.956,19.901)
OP2: (27.309,53.118,22.115)
C4: (23.364,51.038,26.434)
O5': (25.031,53.284,21.115)
C3': (24.667,55.357,23.700)
C1': (22.484,54.731,24.550)
O4': (22.486,54.525,23.160)
C5': (24.206,53.333,22.247)
P: (26.328,52.427,21.259)
O2: (22.502,54.307,27.205)
C4': (23.804,54.730,22.601)
C2': (23.732,55.536,24.893)
O2': (23.356,56.890,25.048)
N1: (22.778,53.398,25.160)
N3: (23.068,52.114,27.155)
N4: (23.653,49.903,27.092)
C6: (23.093,52.279,24.434)
C5: (23.384,51.099,25.009)
O3': (25.305,56.594,23.356)
C4: (25.388,44.297,24.310)
N3: (25.104,45.333,25.179)
OP1: (25.412,48.406,17.113)
OP2: (26.188,46.180,18.098)
C2: (24.962,46.659,24.859)
C1': (25.025,48.365,23.105)
C3': (25.884,49.847,21.439)
O5': (25.079,47.900,19.545)
O4': (23.965,48.636,22.217)
C5': (24.137,48.923,19.827)
P: (25.237,47.300,18.072)
C4': (24.409,49.545,21.172)
C2': (26.310,48.693,22.340)
O2': (27.382,49.009,23.209)
N1: (25.104,46.949,23.515)
O4: (25.503,43.162,24.749)
O2: (24.710,47.508,25.703)
C6: (25.389,45.963,22.598)
C5: (25.525,44.676,22.937)
O3': (26.007,51.099,22.124)
N3: (25.104,45.333,25.179)
OP1: (25.412,48.406,17.113)
OP2: (26.188,46.180,18.098)
C2: (24.962,46.659,24.859)
C1': (25.025,48.365,23.105)
C3': (25.884,49.847,21.439)
O5': (25.079,47.900,19.545)
O4': (23.965,48.636,22.217)
C5': (24.137,48.923,19.827)
P: (25.237,47.300,18.072)
C4': (24.409,49.545,21.172)
C2': (26.310,48.693,22.340)
O2': (27.382,49.009,23.209)
N1: (25.104,46.949,23.515)
O4: (25.503,43.162,24.749)
O2: (24.710,47.508,25.703)
C6: (25.389,45.963,22.598)
C5: (25.525,44.676,22.937)
O3': (26.007,51.099,22.124)
Image (generated by PyMOL):