Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2378:A2317
Extra
PDB:
ATOM 1 O3' U A2377 -136.177 -45.943 35.762 1.00 0.01 O
ATOM 2 P C A2378 -137.313 -46.362 34.709 1.00 0.01 P
ATOM 3 OP1 C A2378 -137.588 -45.167 33.876 1.00 0.01 O
ATOM 4 OP2 C A2378 -138.404 -46.972 35.459 1.00 0.01 O
ATOM 5 O5' C A2378 -136.596 -47.460 33.842 1.00 0.01 O
ATOM 6 C5' C A2378 -137.105 -47.837 32.577 1.00 0.01 C
ATOM 7 C4' C A2378 -136.966 -49.316 32.365 1.00 0.01 C
ATOM 8 O4' C A2378 -137.536 -49.683 31.097 1.00 0.01 O
ATOM 9 C3' C A2378 -135.551 -49.857 32.291 1.00 0.01 C
ATOM 10 O3' C A2378 -134.970 -50.037 33.558 1.00 0.01 O
ATOM 11 C2' C A2378 -135.762 -51.150 31.553 1.00 0.01 C
ATOM 12 O2' C A2378 -136.384 -52.079 32.407 1.00 0.01 O
ATOM 13 C1' C A2378 -136.782 -50.726 30.525 1.00 0.01 C
ATOM 14 N1 C A2378 -136.169 -50.220 29.309 1.00 0.01 N
ATOM 15 C2 C A2378 -135.493 -51.065 28.465 1.00 0.01 C
ATOM 16 O2 C A2378 -135.407 -52.221 28.818 1.00 0.01 O
ATOM 17 N3 C A2378 -134.963 -50.575 27.336 1.00 0.01 N
ATOM 18 C4 C A2378 -135.126 -49.274 27.083 1.00 0.01 C
ATOM 19 N4 C A2378 -134.619 -48.739 25.991 1.00 0.01 N
ATOM 20 C5 C A2378 -135.825 -48.385 27.921 1.00 0.01 C
ATOM 21 C6 C A2378 -136.342 -48.900 29.023 1.00 0.01 C
ATOM 22 P A A2379 -133.496 -49.532 33.818 1.00 0.01 P
ATOM 23 OP1 A A2379 -133.328 -49.411 35.262 1.00 0.01 O
ATOM 24 OP2 A A2379 -133.313 -48.357 32.978 1.00 0.01 O
ATOM 25 O5' A A2379 -132.619 -50.728 33.271 1.00 0.01 O
TER
ATOM 1 O3' G B2316 -139.734 -39.909 23.378 1.00 0.26 O
ATOM 2 P U B2317 -138.234 -39.992 23.909 1.00 1.53 P
ATOM 3 OP1 U B2317 -138.008 -38.799 24.753 1.00 1.53 O
ATOM 4 OP2 U B2317 -137.357 -40.235 22.740 1.00 1.53 O
ATOM 5 O5' U B2317 -138.265 -41.264 24.803 1.00 1.53 O
ATOM 6 C5' U B2317 -138.738 -41.218 26.125 1.00 1.53 C
ATOM 7 C4' U B2317 -138.492 -42.542 26.759 1.00 1.53 C
ATOM 8 O4' U B2317 -138.775 -43.568 25.790 1.00 1.53 O
ATOM 9 C3' U B2317 -137.065 -42.778 27.210 1.00 1.53 C
ATOM 10 O3' U B2317 -136.950 -42.494 28.594 1.00 1.53 O
ATOM 11 C2' U B2317 -136.764 -44.247 26.861 1.00 1.53 C
ATOM 12 O2' U B2317 -136.851 -45.065 28.036 1.00 1.53 O
ATOM 13 C1' U B2317 -137.907 -44.638 25.919 1.00 1.53 C
ATOM 14 N1 U B2317 -137.498 -45.040 24.580 1.00 1.53 N
ATOM 15 C2 U B2317 -137.469 -46.382 24.318 1.00 1.53 C
ATOM 16 O2 U B2317 -137.615 -47.209 25.179 1.00 1.53 O
ATOM 17 N3 U B2317 -137.184 -46.761 23.044 1.00 1.53 N
ATOM 18 C4 U B2317 -136.970 -45.925 21.991 1.00 1.53 C
ATOM 19 O4 U B2317 -136.715 -46.424 20.892 1.00 1.53 O
ATOM 20 C5 U B2317 -137.091 -44.532 22.314 1.00 1.53 C
ATOM 21 C6 U B2317 -137.384 -44.148 23.562 1.00 1.53 C
ATOM 22 P G B2318 -135.648 -41.803 29.193 1.00 0.01 P
ATOM 23 OP1 G B2318 -134.484 -42.390 28.450 1.00 0.01 O
ATOM 24 OP2 G B2318 -135.718 -41.951 30.672 1.00 0.01 O
ATOM 25 O5' G B2318 -135.844 -40.276 28.809 1.00 0.01 O
TER
ATOM 2 P C A2378 -137.313 -46.362 34.709 1.00 0.01 P
ATOM 3 OP1 C A2378 -137.588 -45.167 33.876 1.00 0.01 O
ATOM 4 OP2 C A2378 -138.404 -46.972 35.459 1.00 0.01 O
ATOM 5 O5' C A2378 -136.596 -47.460 33.842 1.00 0.01 O
ATOM 6 C5' C A2378 -137.105 -47.837 32.577 1.00 0.01 C
ATOM 7 C4' C A2378 -136.966 -49.316 32.365 1.00 0.01 C
ATOM 8 O4' C A2378 -137.536 -49.683 31.097 1.00 0.01 O
ATOM 9 C3' C A2378 -135.551 -49.857 32.291 1.00 0.01 C
ATOM 10 O3' C A2378 -134.970 -50.037 33.558 1.00 0.01 O
ATOM 11 C2' C A2378 -135.762 -51.150 31.553 1.00 0.01 C
ATOM 12 O2' C A2378 -136.384 -52.079 32.407 1.00 0.01 O
ATOM 13 C1' C A2378 -136.782 -50.726 30.525 1.00 0.01 C
ATOM 14 N1 C A2378 -136.169 -50.220 29.309 1.00 0.01 N
ATOM 15 C2 C A2378 -135.493 -51.065 28.465 1.00 0.01 C
ATOM 16 O2 C A2378 -135.407 -52.221 28.818 1.00 0.01 O
ATOM 17 N3 C A2378 -134.963 -50.575 27.336 1.00 0.01 N
ATOM 18 C4 C A2378 -135.126 -49.274 27.083 1.00 0.01 C
ATOM 19 N4 C A2378 -134.619 -48.739 25.991 1.00 0.01 N
ATOM 20 C5 C A2378 -135.825 -48.385 27.921 1.00 0.01 C
ATOM 21 C6 C A2378 -136.342 -48.900 29.023 1.00 0.01 C
ATOM 22 P A A2379 -133.496 -49.532 33.818 1.00 0.01 P
ATOM 23 OP1 A A2379 -133.328 -49.411 35.262 1.00 0.01 O
ATOM 24 OP2 A A2379 -133.313 -48.357 32.978 1.00 0.01 O
ATOM 25 O5' A A2379 -132.619 -50.728 33.271 1.00 0.01 O
TER
ATOM 1 O3' G B2316 -139.734 -39.909 23.378 1.00 0.26 O
ATOM 2 P U B2317 -138.234 -39.992 23.909 1.00 1.53 P
ATOM 3 OP1 U B2317 -138.008 -38.799 24.753 1.00 1.53 O
ATOM 4 OP2 U B2317 -137.357 -40.235 22.740 1.00 1.53 O
ATOM 5 O5' U B2317 -138.265 -41.264 24.803 1.00 1.53 O
ATOM 6 C5' U B2317 -138.738 -41.218 26.125 1.00 1.53 C
ATOM 7 C4' U B2317 -138.492 -42.542 26.759 1.00 1.53 C
ATOM 8 O4' U B2317 -138.775 -43.568 25.790 1.00 1.53 O
ATOM 9 C3' U B2317 -137.065 -42.778 27.210 1.00 1.53 C
ATOM 10 O3' U B2317 -136.950 -42.494 28.594 1.00 1.53 O
ATOM 11 C2' U B2317 -136.764 -44.247 26.861 1.00 1.53 C
ATOM 12 O2' U B2317 -136.851 -45.065 28.036 1.00 1.53 O
ATOM 13 C1' U B2317 -137.907 -44.638 25.919 1.00 1.53 C
ATOM 14 N1 U B2317 -137.498 -45.040 24.580 1.00 1.53 N
ATOM 15 C2 U B2317 -137.469 -46.382 24.318 1.00 1.53 C
ATOM 16 O2 U B2317 -137.615 -47.209 25.179 1.00 1.53 O
ATOM 17 N3 U B2317 -137.184 -46.761 23.044 1.00 1.53 N
ATOM 18 C4 U B2317 -136.970 -45.925 21.991 1.00 1.53 C
ATOM 19 O4 U B2317 -136.715 -46.424 20.892 1.00 1.53 O
ATOM 20 C5 U B2317 -137.091 -44.532 22.314 1.00 1.53 C
ATOM 21 C6 U B2317 -137.384 -44.148 23.562 1.00 1.53 C
ATOM 22 P G B2318 -135.648 -41.803 29.193 1.00 0.01 P
ATOM 23 OP1 G B2318 -134.484 -42.390 28.450 1.00 0.01 O
ATOM 24 OP2 G B2318 -135.718 -41.951 30.672 1.00 0.01 O
ATOM 25 O5' G B2318 -135.844 -40.276 28.809 1.00 0.01 O
TER
Atoms:
C2: (-135.493,-51.065,28.465)
OP1: (-137.588,-45.167,33.876)
OP2: (-138.404,-46.972,35.459)
C4: (-135.126,-49.274,27.083)
O5': (-136.596,-47.460,33.842)
C3': (-135.551,-49.857,32.291)
C1': (-136.782,-50.726,30.525)
O4': (-137.536,-49.683,31.097)
C5': (-137.105,-47.837,32.577)
P: (-137.313,-46.362,34.709)
O2: (-135.407,-52.221,28.818)
C4': (-136.966,-49.316,32.365)
C2': (-135.762,-51.150,31.553)
O2': (-136.384,-52.079,32.407)
N1: (-136.169,-50.220,29.309)
N3: (-134.963,-50.575,27.336)
N4: (-134.619,-48.739,25.991)
C6: (-136.342,-48.900,29.023)
C5: (-135.825,-48.385,27.921)
O3': (-134.970,-50.037,33.558)
OP1: (-137.588,-45.167,33.876)
OP2: (-138.404,-46.972,35.459)
C4: (-135.126,-49.274,27.083)
O5': (-136.596,-47.460,33.842)
C3': (-135.551,-49.857,32.291)
C1': (-136.782,-50.726,30.525)
O4': (-137.536,-49.683,31.097)
C5': (-137.105,-47.837,32.577)
P: (-137.313,-46.362,34.709)
O2: (-135.407,-52.221,28.818)
C4': (-136.966,-49.316,32.365)
C2': (-135.762,-51.150,31.553)
O2': (-136.384,-52.079,32.407)
N1: (-136.169,-50.220,29.309)
N3: (-134.963,-50.575,27.336)
N4: (-134.619,-48.739,25.991)
C6: (-136.342,-48.900,29.023)
C5: (-135.825,-48.385,27.921)
O3': (-134.970,-50.037,33.558)
C4: (-136.970,-45.925,21.991)
N3: (-137.184,-46.761,23.044)
OP1: (-138.008,-38.799,24.753)
OP2: (-137.357,-40.235,22.740)
C2: (-137.469,-46.382,24.318)
C1': (-137.907,-44.638,25.919)
C3': (-137.065,-42.778,27.210)
O5': (-138.265,-41.264,24.803)
O4': (-138.775,-43.568,25.790)
C5': (-138.738,-41.218,26.125)
P: (-138.234,-39.992,23.909)
C4': (-138.492,-42.542,26.759)
C2': (-136.764,-44.247,26.861)
O2': (-136.851,-45.065,28.036)
N1: (-137.498,-45.040,24.580)
O4: (-136.715,-46.424,20.892)
O2: (-137.615,-47.209,25.179)
C6: (-137.384,-44.148,23.562)
C5: (-137.091,-44.532,22.314)
O3': (-136.950,-42.494,28.594)
N3: (-137.184,-46.761,23.044)
OP1: (-138.008,-38.799,24.753)
OP2: (-137.357,-40.235,22.740)
C2: (-137.469,-46.382,24.318)
C1': (-137.907,-44.638,25.919)
C3': (-137.065,-42.778,27.210)
O5': (-138.265,-41.264,24.803)
O4': (-138.775,-43.568,25.790)
C5': (-138.738,-41.218,26.125)
P: (-138.234,-39.992,23.909)
C4': (-138.492,-42.542,26.759)
C2': (-136.764,-44.247,26.861)
O2': (-136.851,-45.065,28.036)
N1: (-137.498,-45.040,24.580)
O4: (-136.715,-46.424,20.892)
O2: (-137.615,-47.209,25.179)
C6: (-137.384,-44.148,23.562)
C5: (-137.091,-44.532,22.314)
O3': (-136.950,-42.494,28.594)
Image (generated by PyMOL):