Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A35:A34
Extra
PDB:
ATOM 1 O3' U A 34 20.539 -32.391 -15.782 1.00 54.28 O
ATOM 2 P C A 35 20.153 -32.298 -17.341 1.00 61.95 P
ATOM 3 OP1 C A 35 21.014 -33.267 -18.066 1.00 60.88 O
ATOM 4 OP2 C A 35 20.216 -30.865 -17.721 1.00 59.17 O
ATOM 5 O5' C A 35 18.639 -32.798 -17.359 1.00 54.57 O
ATOM 6 C5' C A 35 18.328 -34.185 -17.403 1.00 50.54 C
ATOM 7 C4' C A 35 17.015 -34.487 -16.717 1.00 49.85 C
ATOM 8 O4' C A 35 17.109 -34.150 -15.310 1.00 48.19 O
ATOM 9 C3' C A 35 15.802 -33.708 -17.209 1.00 52.20 C
ATOM 10 O3' C A 35 15.223 -34.269 -18.376 1.00 50.13 O
ATOM 11 C2' C A 35 14.872 -33.733 -16.002 1.00 47.45 C
ATOM 12 O2' C A 35 14.178 -34.970 -15.929 1.00 55.26 O
ATOM 13 C1' C A 35 15.867 -33.669 -14.843 1.00 45.88 C
ATOM 14 N1 C A 35 16.058 -32.291 -14.341 1.00 43.86 N
ATOM 15 C2 C A 35 14.976 -31.596 -13.790 1.00 42.35 C
ATOM 16 O2 C A 35 13.864 -32.144 -13.748 1.00 50.64 O
ATOM 17 N3 C A 35 15.171 -30.339 -13.325 1.00 44.06 N
ATOM 18 C4 C A 35 16.383 -29.784 -13.389 1.00 45.73 C
ATOM 19 N4 C A 35 16.534 -28.545 -12.919 1.00 38.99 N
ATOM 20 C5 C A 35 17.500 -30.475 -13.937 1.00 47.28 C
ATOM 21 C6 C A 35 17.296 -31.715 -14.394 1.00 45.98 C
ATOM 22 P U A 36 14.672 -33.317 -19.547 1.00 53.75 P
ATOM 23 OP1 U A 36 13.806 -34.151 -20.415 1.00 50.28 O
ATOM 24 OP2 U A 36 15.847 -32.643 -20.151 1.00 62.29 O
ATOM 25 O5' U A 36 13.784 -32.255 -18.757 1.00 49.23 O
TER
ATOM 1 O3' U B 33 26.841 -32.130 -13.730 1.00 74.47 O
ATOM 2 P U B 34 25.969 -31.630 -14.987 1.00 74.86 P
ATOM 3 OP1 U B 34 26.094 -32.666 -16.041 1.00 65.77 O
ATOM 4 OP2 U B 34 26.403 -30.248 -15.297 1.00 65.97 O
ATOM 5 O5' U B 34 24.481 -31.624 -14.414 1.00 65.85 O
ATOM 6 C5' U B 34 23.815 -32.849 -14.120 1.00 64.22 C
ATOM 7 C4' U B 34 22.310 -32.711 -14.177 1.00 59.37 C
ATOM 8 O4' U B 34 21.829 -32.131 -12.934 1.00 56.39 O
ATOM 9 C3' U B 34 21.763 -31.831 -15.304 1.00 56.95 C
ATOM 10 O3' U B 34 20.539 -32.391 -15.782 1.00 54.28 O
ATOM 11 C2' U B 34 21.470 -30.514 -14.590 1.00 50.74 C
ATOM 12 O2' U B 34 20.482 -29.718 -15.210 1.00 50.22 O
ATOM 13 C1' U B 34 21.017 -31.011 -13.221 1.00 50.03 C
ATOM 14 N1 U B 34 21.177 -30.028 -12.129 1.00 50.14 N
ATOM 15 C2 U B 34 20.210 -30.052 -11.145 1.00 50.55 C
ATOM 16 O2 U B 34 19.279 -30.836 -11.159 1.00 52.68 O
ATOM 17 N3 U B 34 20.373 -29.134 -10.142 1.00 50.47 N
ATOM 18 C4 U B 34 21.387 -28.207 -10.030 1.00 53.25 C
ATOM 19 O4 U B 34 21.397 -27.442 -9.064 1.00 50.61 O
ATOM 20 C5 U B 34 22.348 -28.243 -11.090 1.00 52.38 C
ATOM 21 C6 U B 34 22.215 -29.129 -12.084 1.00 52.32 C
ATOM 22 P C B 35 20.153 -32.298 -17.341 1.00 61.95 P
ATOM 23 OP1 C B 35 21.014 -33.267 -18.066 1.00 60.88 O
ATOM 24 OP2 C B 35 20.216 -30.865 -17.721 1.00 59.17 O
ATOM 25 O5' C B 35 18.639 -32.798 -17.359 1.00 54.57 O
TER
ATOM 2 P C A 35 20.153 -32.298 -17.341 1.00 61.95 P
ATOM 3 OP1 C A 35 21.014 -33.267 -18.066 1.00 60.88 O
ATOM 4 OP2 C A 35 20.216 -30.865 -17.721 1.00 59.17 O
ATOM 5 O5' C A 35 18.639 -32.798 -17.359 1.00 54.57 O
ATOM 6 C5' C A 35 18.328 -34.185 -17.403 1.00 50.54 C
ATOM 7 C4' C A 35 17.015 -34.487 -16.717 1.00 49.85 C
ATOM 8 O4' C A 35 17.109 -34.150 -15.310 1.00 48.19 O
ATOM 9 C3' C A 35 15.802 -33.708 -17.209 1.00 52.20 C
ATOM 10 O3' C A 35 15.223 -34.269 -18.376 1.00 50.13 O
ATOM 11 C2' C A 35 14.872 -33.733 -16.002 1.00 47.45 C
ATOM 12 O2' C A 35 14.178 -34.970 -15.929 1.00 55.26 O
ATOM 13 C1' C A 35 15.867 -33.669 -14.843 1.00 45.88 C
ATOM 14 N1 C A 35 16.058 -32.291 -14.341 1.00 43.86 N
ATOM 15 C2 C A 35 14.976 -31.596 -13.790 1.00 42.35 C
ATOM 16 O2 C A 35 13.864 -32.144 -13.748 1.00 50.64 O
ATOM 17 N3 C A 35 15.171 -30.339 -13.325 1.00 44.06 N
ATOM 18 C4 C A 35 16.383 -29.784 -13.389 1.00 45.73 C
ATOM 19 N4 C A 35 16.534 -28.545 -12.919 1.00 38.99 N
ATOM 20 C5 C A 35 17.500 -30.475 -13.937 1.00 47.28 C
ATOM 21 C6 C A 35 17.296 -31.715 -14.394 1.00 45.98 C
ATOM 22 P U A 36 14.672 -33.317 -19.547 1.00 53.75 P
ATOM 23 OP1 U A 36 13.806 -34.151 -20.415 1.00 50.28 O
ATOM 24 OP2 U A 36 15.847 -32.643 -20.151 1.00 62.29 O
ATOM 25 O5' U A 36 13.784 -32.255 -18.757 1.00 49.23 O
TER
ATOM 1 O3' U B 33 26.841 -32.130 -13.730 1.00 74.47 O
ATOM 2 P U B 34 25.969 -31.630 -14.987 1.00 74.86 P
ATOM 3 OP1 U B 34 26.094 -32.666 -16.041 1.00 65.77 O
ATOM 4 OP2 U B 34 26.403 -30.248 -15.297 1.00 65.97 O
ATOM 5 O5' U B 34 24.481 -31.624 -14.414 1.00 65.85 O
ATOM 6 C5' U B 34 23.815 -32.849 -14.120 1.00 64.22 C
ATOM 7 C4' U B 34 22.310 -32.711 -14.177 1.00 59.37 C
ATOM 8 O4' U B 34 21.829 -32.131 -12.934 1.00 56.39 O
ATOM 9 C3' U B 34 21.763 -31.831 -15.304 1.00 56.95 C
ATOM 10 O3' U B 34 20.539 -32.391 -15.782 1.00 54.28 O
ATOM 11 C2' U B 34 21.470 -30.514 -14.590 1.00 50.74 C
ATOM 12 O2' U B 34 20.482 -29.718 -15.210 1.00 50.22 O
ATOM 13 C1' U B 34 21.017 -31.011 -13.221 1.00 50.03 C
ATOM 14 N1 U B 34 21.177 -30.028 -12.129 1.00 50.14 N
ATOM 15 C2 U B 34 20.210 -30.052 -11.145 1.00 50.55 C
ATOM 16 O2 U B 34 19.279 -30.836 -11.159 1.00 52.68 O
ATOM 17 N3 U B 34 20.373 -29.134 -10.142 1.00 50.47 N
ATOM 18 C4 U B 34 21.387 -28.207 -10.030 1.00 53.25 C
ATOM 19 O4 U B 34 21.397 -27.442 -9.064 1.00 50.61 O
ATOM 20 C5 U B 34 22.348 -28.243 -11.090 1.00 52.38 C
ATOM 21 C6 U B 34 22.215 -29.129 -12.084 1.00 52.32 C
ATOM 22 P C B 35 20.153 -32.298 -17.341 1.00 61.95 P
ATOM 23 OP1 C B 35 21.014 -33.267 -18.066 1.00 60.88 O
ATOM 24 OP2 C B 35 20.216 -30.865 -17.721 1.00 59.17 O
ATOM 25 O5' C B 35 18.639 -32.798 -17.359 1.00 54.57 O
TER
Atoms:
C2: (14.976,-31.596,-13.790)
OP1: (21.014,-33.267,-18.066)
OP2: (20.216,-30.865,-17.721)
C4: (16.383,-29.784,-13.389)
O5': (18.639,-32.798,-17.359)
C3': (15.802,-33.708,-17.209)
C1': (15.867,-33.669,-14.843)
O4': (17.109,-34.150,-15.310)
C5': (18.328,-34.185,-17.403)
P: (20.153,-32.298,-17.341)
O2: (13.864,-32.144,-13.748)
C4': (17.015,-34.487,-16.717)
C2': (14.872,-33.733,-16.002)
O2': (14.178,-34.970,-15.929)
N1: (16.058,-32.291,-14.341)
N3: (15.171,-30.339,-13.325)
N4: (16.534,-28.545,-12.919)
C6: (17.296,-31.715,-14.394)
C5: (17.500,-30.475,-13.937)
O3': (15.223,-34.269,-18.376)
OP1: (21.014,-33.267,-18.066)
OP2: (20.216,-30.865,-17.721)
C4: (16.383,-29.784,-13.389)
O5': (18.639,-32.798,-17.359)
C3': (15.802,-33.708,-17.209)
C1': (15.867,-33.669,-14.843)
O4': (17.109,-34.150,-15.310)
C5': (18.328,-34.185,-17.403)
P: (20.153,-32.298,-17.341)
O2: (13.864,-32.144,-13.748)
C4': (17.015,-34.487,-16.717)
C2': (14.872,-33.733,-16.002)
O2': (14.178,-34.970,-15.929)
N1: (16.058,-32.291,-14.341)
N3: (15.171,-30.339,-13.325)
N4: (16.534,-28.545,-12.919)
C6: (17.296,-31.715,-14.394)
C5: (17.500,-30.475,-13.937)
O3': (15.223,-34.269,-18.376)
C4: (21.387,-28.207,-10.030)
N3: (20.373,-29.134,-10.142)
OP1: (26.094,-32.666,-16.041)
OP2: (26.403,-30.248,-15.297)
C2: (20.210,-30.052,-11.145)
C1': (21.017,-31.011,-13.221)
C3': (21.763,-31.831,-15.304)
O5': (24.481,-31.624,-14.414)
O4': (21.829,-32.131,-12.934)
C5': (23.815,-32.849,-14.120)
P: (25.969,-31.630,-14.987)
C4': (22.310,-32.711,-14.177)
C2': (21.470,-30.514,-14.590)
O2': (20.482,-29.718,-15.210)
N1: (21.177,-30.028,-12.129)
O4: (21.397,-27.442,-9.064)
O2: (19.279,-30.836,-11.159)
C6: (22.215,-29.129,-12.084)
C5: (22.348,-28.243,-11.090)
O3': (20.539,-32.391,-15.782)
N3: (20.373,-29.134,-10.142)
OP1: (26.094,-32.666,-16.041)
OP2: (26.403,-30.248,-15.297)
C2: (20.210,-30.052,-11.145)
C1': (21.017,-31.011,-13.221)
C3': (21.763,-31.831,-15.304)
O5': (24.481,-31.624,-14.414)
O4': (21.829,-32.131,-12.934)
C5': (23.815,-32.849,-14.120)
P: (25.969,-31.630,-14.987)
C4': (22.310,-32.711,-14.177)
C2': (21.470,-30.514,-14.590)
O2': (20.482,-29.718,-15.210)
N1: (21.177,-30.028,-12.129)
O4: (21.397,-27.442,-9.064)
O2: (19.279,-30.836,-11.159)
C6: (22.215,-29.129,-12.084)
C5: (22.348,-28.243,-11.090)
O3': (20.539,-32.391,-15.782)
Image (generated by PyMOL):