Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:B35:B34
Extra
PDB:
ATOM 1 O3' U A 34 42.084 -18.228 -35.464 1.00 50.84 O
ATOM 2 P C A 35 42.093 -17.917 -33.886 1.00 49.19 P
ATOM 3 OP1 C A 35 42.397 -19.191 -33.190 1.00 51.24 O
ATOM 4 OP2 C A 35 40.823 -17.221 -33.572 1.00 56.99 O
ATOM 5 O5' C A 35 43.317 -16.907 -33.729 1.00 47.93 O
ATOM 6 C5' C A 35 44.650 -17.386 -33.615 1.00 51.85 C
ATOM 7 C4' C A 35 45.645 -16.403 -34.187 1.00 45.86 C
ATOM 8 O4' C A 35 45.388 -16.215 -35.604 1.00 43.66 O
ATOM 9 C3' C A 35 45.604 -14.995 -33.607 1.00 52.65 C
ATOM 10 O3' C A 35 46.328 -14.875 -32.393 1.00 53.01 O
ATOM 11 C2' C A 35 46.172 -14.148 -34.738 1.00 54.40 C
ATOM 12 O2' C A 35 47.591 -14.231 -34.766 1.00 50.42 O
ATOM 13 C1' C A 35 45.623 -14.872 -35.966 1.00 49.06 C
ATOM 14 N1 C A 35 44.350 -14.287 -36.433 1.00 47.61 N
ATOM 15 C2 C A 35 44.357 -13.091 -37.157 1.00 48.18 C
ATOM 16 O2 C A 35 45.441 -12.532 -37.384 1.00 49.95 O
ATOM 17 N3 C A 35 43.180 -12.573 -37.582 1.00 43.97 N
ATOM 18 C4 C A 35 42.036 -13.210 -37.313 1.00 44.51 C
ATOM 19 N4 C A 35 40.893 -12.675 -37.748 1.00 44.12 N
ATOM 20 C5 C A 35 42.004 -14.433 -36.583 1.00 47.22 C
ATOM 21 C6 C A 35 43.174 -14.929 -36.171 1.00 51.75 C
ATOM 22 P U A 36 45.693 -14.093 -31.138 1.00 49.71 P
ATOM 23 OP1 U A 36 46.779 -13.909 -30.144 1.00 51.24 O
ATOM 24 OP2 U A 36 44.475 -14.835 -30.733 1.00 56.17 O
ATOM 25 O5' U A 36 45.287 -12.684 -31.760 1.00 48.87 O
TER
ATOM 1 O3' U B 33 38.574 -23.348 -37.980 1.00 52.06 O
ATOM 2 P U B 34 38.764 -22.421 -36.678 1.00 49.76 P
ATOM 3 OP1 U B 34 39.639 -23.163 -35.740 1.00 57.37 O
ATOM 4 OP2 U B 34 37.412 -22.026 -36.222 1.00 48.49 O
ATOM 5 O5' U B 34 39.540 -21.154 -37.249 1.00 53.84 O
ATOM 6 C5' U B 34 40.956 -21.179 -37.402 1.00 52.91 C
ATOM 7 C4' U B 34 41.571 -19.811 -37.216 1.00 52.24 C
ATOM 8 O4' U B 34 41.345 -19.015 -38.411 1.00 53.23 O
ATOM 9 C3' U B 34 41.023 -18.992 -36.044 1.00 49.92 C
ATOM 10 O3' U B 34 42.084 -18.228 -35.464 1.00 50.84 O
ATOM 11 C2' U B 34 40.034 -18.050 -36.726 1.00 48.70 C
ATOM 12 O2' U B 34 39.784 -16.850 -36.025 1.00 47.78 O
ATOM 13 C1' U B 34 40.733 -17.792 -38.057 1.00 47.31 C
ATOM 14 N1 U B 34 39.824 -17.396 -39.150 1.00 47.74 N
ATOM 15 C2 U B 34 40.323 -16.506 -40.078 1.00 47.50 C
ATOM 16 O2 U B 34 41.459 -16.067 -40.016 1.00 45.35 O
ATOM 17 N3 U B 34 39.447 -16.158 -41.077 1.00 45.05 N
ATOM 18 C4 U B 34 38.148 -16.603 -41.229 1.00 45.63 C
ATOM 19 O4 U B 34 37.472 -16.205 -42.180 1.00 43.18 O
ATOM 20 C5 U B 34 37.710 -17.520 -40.221 1.00 45.08 C
ATOM 21 C6 U B 34 38.541 -17.877 -39.238 1.00 44.72 C
ATOM 22 P C B 35 42.093 -17.917 -33.886 1.00 49.19 P
ATOM 23 OP1 C B 35 42.397 -19.191 -33.190 1.00 51.24 O
ATOM 24 OP2 C B 35 40.823 -17.221 -33.572 1.00 56.99 O
ATOM 25 O5' C B 35 43.317 -16.907 -33.729 1.00 47.93 O
TER
ATOM 2 P C A 35 42.093 -17.917 -33.886 1.00 49.19 P
ATOM 3 OP1 C A 35 42.397 -19.191 -33.190 1.00 51.24 O
ATOM 4 OP2 C A 35 40.823 -17.221 -33.572 1.00 56.99 O
ATOM 5 O5' C A 35 43.317 -16.907 -33.729 1.00 47.93 O
ATOM 6 C5' C A 35 44.650 -17.386 -33.615 1.00 51.85 C
ATOM 7 C4' C A 35 45.645 -16.403 -34.187 1.00 45.86 C
ATOM 8 O4' C A 35 45.388 -16.215 -35.604 1.00 43.66 O
ATOM 9 C3' C A 35 45.604 -14.995 -33.607 1.00 52.65 C
ATOM 10 O3' C A 35 46.328 -14.875 -32.393 1.00 53.01 O
ATOM 11 C2' C A 35 46.172 -14.148 -34.738 1.00 54.40 C
ATOM 12 O2' C A 35 47.591 -14.231 -34.766 1.00 50.42 O
ATOM 13 C1' C A 35 45.623 -14.872 -35.966 1.00 49.06 C
ATOM 14 N1 C A 35 44.350 -14.287 -36.433 1.00 47.61 N
ATOM 15 C2 C A 35 44.357 -13.091 -37.157 1.00 48.18 C
ATOM 16 O2 C A 35 45.441 -12.532 -37.384 1.00 49.95 O
ATOM 17 N3 C A 35 43.180 -12.573 -37.582 1.00 43.97 N
ATOM 18 C4 C A 35 42.036 -13.210 -37.313 1.00 44.51 C
ATOM 19 N4 C A 35 40.893 -12.675 -37.748 1.00 44.12 N
ATOM 20 C5 C A 35 42.004 -14.433 -36.583 1.00 47.22 C
ATOM 21 C6 C A 35 43.174 -14.929 -36.171 1.00 51.75 C
ATOM 22 P U A 36 45.693 -14.093 -31.138 1.00 49.71 P
ATOM 23 OP1 U A 36 46.779 -13.909 -30.144 1.00 51.24 O
ATOM 24 OP2 U A 36 44.475 -14.835 -30.733 1.00 56.17 O
ATOM 25 O5' U A 36 45.287 -12.684 -31.760 1.00 48.87 O
TER
ATOM 1 O3' U B 33 38.574 -23.348 -37.980 1.00 52.06 O
ATOM 2 P U B 34 38.764 -22.421 -36.678 1.00 49.76 P
ATOM 3 OP1 U B 34 39.639 -23.163 -35.740 1.00 57.37 O
ATOM 4 OP2 U B 34 37.412 -22.026 -36.222 1.00 48.49 O
ATOM 5 O5' U B 34 39.540 -21.154 -37.249 1.00 53.84 O
ATOM 6 C5' U B 34 40.956 -21.179 -37.402 1.00 52.91 C
ATOM 7 C4' U B 34 41.571 -19.811 -37.216 1.00 52.24 C
ATOM 8 O4' U B 34 41.345 -19.015 -38.411 1.00 53.23 O
ATOM 9 C3' U B 34 41.023 -18.992 -36.044 1.00 49.92 C
ATOM 10 O3' U B 34 42.084 -18.228 -35.464 1.00 50.84 O
ATOM 11 C2' U B 34 40.034 -18.050 -36.726 1.00 48.70 C
ATOM 12 O2' U B 34 39.784 -16.850 -36.025 1.00 47.78 O
ATOM 13 C1' U B 34 40.733 -17.792 -38.057 1.00 47.31 C
ATOM 14 N1 U B 34 39.824 -17.396 -39.150 1.00 47.74 N
ATOM 15 C2 U B 34 40.323 -16.506 -40.078 1.00 47.50 C
ATOM 16 O2 U B 34 41.459 -16.067 -40.016 1.00 45.35 O
ATOM 17 N3 U B 34 39.447 -16.158 -41.077 1.00 45.05 N
ATOM 18 C4 U B 34 38.148 -16.603 -41.229 1.00 45.63 C
ATOM 19 O4 U B 34 37.472 -16.205 -42.180 1.00 43.18 O
ATOM 20 C5 U B 34 37.710 -17.520 -40.221 1.00 45.08 C
ATOM 21 C6 U B 34 38.541 -17.877 -39.238 1.00 44.72 C
ATOM 22 P C B 35 42.093 -17.917 -33.886 1.00 49.19 P
ATOM 23 OP1 C B 35 42.397 -19.191 -33.190 1.00 51.24 O
ATOM 24 OP2 C B 35 40.823 -17.221 -33.572 1.00 56.99 O
ATOM 25 O5' C B 35 43.317 -16.907 -33.729 1.00 47.93 O
TER
Atoms:
C2: (44.357,-13.091,-37.157)
OP1: (42.397,-19.191,-33.190)
OP2: (40.823,-17.221,-33.572)
C4: (42.036,-13.210,-37.313)
O5': (43.317,-16.907,-33.729)
C3': (45.604,-14.995,-33.607)
C1': (45.623,-14.872,-35.966)
O4': (45.388,-16.215,-35.604)
C5': (44.650,-17.386,-33.615)
P: (42.093,-17.917,-33.886)
O2: (45.441,-12.532,-37.384)
C4': (45.645,-16.403,-34.187)
C2': (46.172,-14.148,-34.738)
O2': (47.591,-14.231,-34.766)
N1: (44.350,-14.287,-36.433)
N3: (43.180,-12.573,-37.582)
N4: (40.893,-12.675,-37.748)
C6: (43.174,-14.929,-36.171)
C5: (42.004,-14.433,-36.583)
O3': (46.328,-14.875,-32.393)
OP1: (42.397,-19.191,-33.190)
OP2: (40.823,-17.221,-33.572)
C4: (42.036,-13.210,-37.313)
O5': (43.317,-16.907,-33.729)
C3': (45.604,-14.995,-33.607)
C1': (45.623,-14.872,-35.966)
O4': (45.388,-16.215,-35.604)
C5': (44.650,-17.386,-33.615)
P: (42.093,-17.917,-33.886)
O2: (45.441,-12.532,-37.384)
C4': (45.645,-16.403,-34.187)
C2': (46.172,-14.148,-34.738)
O2': (47.591,-14.231,-34.766)
N1: (44.350,-14.287,-36.433)
N3: (43.180,-12.573,-37.582)
N4: (40.893,-12.675,-37.748)
C6: (43.174,-14.929,-36.171)
C5: (42.004,-14.433,-36.583)
O3': (46.328,-14.875,-32.393)
C4: (38.148,-16.603,-41.229)
N3: (39.447,-16.158,-41.077)
OP1: (39.639,-23.163,-35.740)
OP2: (37.412,-22.026,-36.222)
C2: (40.323,-16.506,-40.078)
C1': (40.733,-17.792,-38.057)
C3': (41.023,-18.992,-36.044)
O5': (39.540,-21.154,-37.249)
O4': (41.345,-19.015,-38.411)
C5': (40.956,-21.179,-37.402)
P: (38.764,-22.421,-36.678)
C4': (41.571,-19.811,-37.216)
C2': (40.034,-18.050,-36.726)
O2': (39.784,-16.850,-36.025)
N1: (39.824,-17.396,-39.150)
O4: (37.472,-16.205,-42.180)
O2: (41.459,-16.067,-40.016)
C6: (38.541,-17.877,-39.238)
C5: (37.710,-17.520,-40.221)
O3': (42.084,-18.228,-35.464)
N3: (39.447,-16.158,-41.077)
OP1: (39.639,-23.163,-35.740)
OP2: (37.412,-22.026,-36.222)
C2: (40.323,-16.506,-40.078)
C1': (40.733,-17.792,-38.057)
C3': (41.023,-18.992,-36.044)
O5': (39.540,-21.154,-37.249)
O4': (41.345,-19.015,-38.411)
C5': (40.956,-21.179,-37.402)
P: (38.764,-22.421,-36.678)
C4': (41.571,-19.811,-37.216)
C2': (40.034,-18.050,-36.726)
O2': (39.784,-16.850,-36.025)
N1: (39.824,-17.396,-39.150)
O4: (37.472,-16.205,-42.180)
O2: (41.459,-16.067,-40.016)
C6: (38.541,-17.877,-39.238)
C5: (37.710,-17.520,-40.221)
O3': (42.084,-18.228,-35.464)
Image (generated by PyMOL):