Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11526:11498
Extra
PDB:
ATOM 1 O3' C A1525 19.111 1.211 143.173 1.00232.05 O
ATOM 2 P C A1526 19.969 0.649 141.881 1.00176.50 P
ATOM 3 OP1 C A1526 20.494 1.835 141.147 1.00176.48 O
ATOM 4 OP2 C A1526 19.056 -0.282 141.145 1.00175.93 O
ATOM 5 O5' C A1526 21.200 -0.201 142.515 1.00176.80 O
ATOM 6 C5' C A1526 22.275 0.419 143.244 1.00177.35 C
ATOM 7 C4' C A1526 23.586 0.454 142.485 1.00177.24 C
ATOM 8 O4' C A1526 24.451 -0.602 142.972 1.00177.39 O
ATOM 9 C3' C A1526 23.498 0.276 140.966 1.00176.59 C
ATOM 10 O3' C A1526 23.546 1.538 140.280 1.00176.53 O
ATOM 11 C2' C A1526 24.634 -0.708 140.643 1.00176.46 C
ATOM 12 O2' C A1526 25.862 -0.020 140.451 1.00176.67 O
ATOM 13 C1' C A1526 24.741 -1.495 141.949 1.00176.87 C
ATOM 14 N1 C A1526 23.751 -2.602 142.065 1.00176.59 N
ATOM 15 C2 C A1526 24.032 -3.492 143.111 1.00176.91 C
ATOM 16 O2 C A1526 25.062 -3.313 143.776 1.00177.36 O
ATOM 17 N3 C A1526 23.208 -4.524 143.384 1.00176.73 N
ATOM 18 C4 C A1526 22.109 -4.686 142.660 1.00176.26 C
ATOM 19 N4 C A1526 21.313 -5.716 142.946 1.00176.09 N
ATOM 20 C5 C A1526 21.775 -3.789 141.611 1.00175.93 C
ATOM 21 C6 C A1526 22.601 -2.772 141.347 1.00176.11 C
ATOM 22 P A A1527 24.178 1.708 138.801 1.00 81.81 P
ATOM 23 OP1 A A1527 23.788 3.078 138.318 1.00 81.79 O
ATOM 24 OP2 A A1527 23.755 0.515 137.995 1.00 81.23 O
ATOM 25 O5' A A1527 25.768 1.652 139.082 1.00 82.14 O
TER
ATOM 1 O3' U B1497 21.205 -2.231 134.035 1.00 71.65 O
ATOM 2 P U B1498 19.913 -1.366 134.427 1.00121.81 P
ATOM 3 OP1 U B1498 19.062 -1.277 133.226 1.00121.23 O
ATOM 4 OP2 U B1498 20.394 -0.105 135.060 1.00122.33 O
ATOM 5 O5' U B1498 19.223 -2.292 135.513 1.00121.99 O
ATOM 6 C5' U B1498 18.783 -3.599 135.170 1.00121.58 C
ATOM 7 C4' U B1498 18.862 -4.558 136.336 1.00121.90 C
ATOM 8 O4' U B1498 20.244 -4.935 136.568 1.00122.12 O
ATOM 9 C3' U B1498 18.317 -4.035 137.669 1.00122.44 C
ATOM 10 O3' U B1498 17.671 -5.100 138.378 1.00122.46 O
ATOM 11 C2' U B1498 19.585 -3.633 138.417 1.00122.98 C
ATOM 12 O2' U B1498 19.450 -3.645 139.824 1.00123.52 O
ATOM 13 C1' U B1498 20.582 -4.693 137.920 1.00122.75 C
ATOM 14 N1 U B1498 22.023 -4.283 137.965 1.00123.03 N
ATOM 15 C2 U B1498 22.875 -4.987 138.814 1.00123.38 C
ATOM 16 O2 U B1498 22.470 -5.889 139.540 1.00123.47 O
ATOM 17 N3 U B1498 24.204 -4.584 138.794 1.00123.63 N
ATOM 18 C4 U B1498 24.780 -3.583 138.024 1.00123.56 C
ATOM 19 O4 U B1498 25.996 -3.336 138.128 1.00123.82 O
ATOM 20 C5 U B1498 23.841 -2.916 137.161 1.00123.19 C
ATOM 21 C6 U B1498 22.543 -3.284 137.154 1.00122.95 C
ATOM 22 P U B1499 16.597 -6.058 137.641 1.00161.82 P
ATOM 23 OP1 U B1499 15.961 -5.263 136.553 1.00161.43 O
ATOM 24 OP2 U B1499 15.725 -6.632 138.706 1.00162.03 O
ATOM 25 O5' U B1499 17.516 -7.211 137.010 1.00161.52 O
TER
ATOM 2 P C A1526 19.969 0.649 141.881 1.00176.50 P
ATOM 3 OP1 C A1526 20.494 1.835 141.147 1.00176.48 O
ATOM 4 OP2 C A1526 19.056 -0.282 141.145 1.00175.93 O
ATOM 5 O5' C A1526 21.200 -0.201 142.515 1.00176.80 O
ATOM 6 C5' C A1526 22.275 0.419 143.244 1.00177.35 C
ATOM 7 C4' C A1526 23.586 0.454 142.485 1.00177.24 C
ATOM 8 O4' C A1526 24.451 -0.602 142.972 1.00177.39 O
ATOM 9 C3' C A1526 23.498 0.276 140.966 1.00176.59 C
ATOM 10 O3' C A1526 23.546 1.538 140.280 1.00176.53 O
ATOM 11 C2' C A1526 24.634 -0.708 140.643 1.00176.46 C
ATOM 12 O2' C A1526 25.862 -0.020 140.451 1.00176.67 O
ATOM 13 C1' C A1526 24.741 -1.495 141.949 1.00176.87 C
ATOM 14 N1 C A1526 23.751 -2.602 142.065 1.00176.59 N
ATOM 15 C2 C A1526 24.032 -3.492 143.111 1.00176.91 C
ATOM 16 O2 C A1526 25.062 -3.313 143.776 1.00177.36 O
ATOM 17 N3 C A1526 23.208 -4.524 143.384 1.00176.73 N
ATOM 18 C4 C A1526 22.109 -4.686 142.660 1.00176.26 C
ATOM 19 N4 C A1526 21.313 -5.716 142.946 1.00176.09 N
ATOM 20 C5 C A1526 21.775 -3.789 141.611 1.00175.93 C
ATOM 21 C6 C A1526 22.601 -2.772 141.347 1.00176.11 C
ATOM 22 P A A1527 24.178 1.708 138.801 1.00 81.81 P
ATOM 23 OP1 A A1527 23.788 3.078 138.318 1.00 81.79 O
ATOM 24 OP2 A A1527 23.755 0.515 137.995 1.00 81.23 O
ATOM 25 O5' A A1527 25.768 1.652 139.082 1.00 82.14 O
TER
ATOM 1 O3' U B1497 21.205 -2.231 134.035 1.00 71.65 O
ATOM 2 P U B1498 19.913 -1.366 134.427 1.00121.81 P
ATOM 3 OP1 U B1498 19.062 -1.277 133.226 1.00121.23 O
ATOM 4 OP2 U B1498 20.394 -0.105 135.060 1.00122.33 O
ATOM 5 O5' U B1498 19.223 -2.292 135.513 1.00121.99 O
ATOM 6 C5' U B1498 18.783 -3.599 135.170 1.00121.58 C
ATOM 7 C4' U B1498 18.862 -4.558 136.336 1.00121.90 C
ATOM 8 O4' U B1498 20.244 -4.935 136.568 1.00122.12 O
ATOM 9 C3' U B1498 18.317 -4.035 137.669 1.00122.44 C
ATOM 10 O3' U B1498 17.671 -5.100 138.378 1.00122.46 O
ATOM 11 C2' U B1498 19.585 -3.633 138.417 1.00122.98 C
ATOM 12 O2' U B1498 19.450 -3.645 139.824 1.00123.52 O
ATOM 13 C1' U B1498 20.582 -4.693 137.920 1.00122.75 C
ATOM 14 N1 U B1498 22.023 -4.283 137.965 1.00123.03 N
ATOM 15 C2 U B1498 22.875 -4.987 138.814 1.00123.38 C
ATOM 16 O2 U B1498 22.470 -5.889 139.540 1.00123.47 O
ATOM 17 N3 U B1498 24.204 -4.584 138.794 1.00123.63 N
ATOM 18 C4 U B1498 24.780 -3.583 138.024 1.00123.56 C
ATOM 19 O4 U B1498 25.996 -3.336 138.128 1.00123.82 O
ATOM 20 C5 U B1498 23.841 -2.916 137.161 1.00123.19 C
ATOM 21 C6 U B1498 22.543 -3.284 137.154 1.00122.95 C
ATOM 22 P U B1499 16.597 -6.058 137.641 1.00161.82 P
ATOM 23 OP1 U B1499 15.961 -5.263 136.553 1.00161.43 O
ATOM 24 OP2 U B1499 15.725 -6.632 138.706 1.00162.03 O
ATOM 25 O5' U B1499 17.516 -7.211 137.010 1.00161.52 O
TER
Atoms:
C2: (24.032,-3.492,143.111)
OP1: (20.494,1.835,141.147)
OP2: (19.056,-0.282,141.145)
C4: (22.109,-4.686,142.660)
O5': (21.200,-0.201,142.515)
C3': (23.498,0.276,140.966)
C1': (24.741,-1.495,141.949)
O4': (24.451,-0.602,142.972)
C5': (22.275,0.419,143.244)
P: (19.969,0.649,141.881)
O2: (25.062,-3.313,143.776)
C4': (23.586,0.454,142.485)
C2': (24.634,-0.708,140.643)
O2': (25.862,-0.020,140.451)
N1: (23.751,-2.602,142.065)
N3: (23.208,-4.524,143.384)
N4: (21.313,-5.716,142.946)
C6: (22.601,-2.772,141.347)
C5: (21.775,-3.789,141.611)
O3': (23.546,1.538,140.280)
OP1: (20.494,1.835,141.147)
OP2: (19.056,-0.282,141.145)
C4: (22.109,-4.686,142.660)
O5': (21.200,-0.201,142.515)
C3': (23.498,0.276,140.966)
C1': (24.741,-1.495,141.949)
O4': (24.451,-0.602,142.972)
C5': (22.275,0.419,143.244)
P: (19.969,0.649,141.881)
O2: (25.062,-3.313,143.776)
C4': (23.586,0.454,142.485)
C2': (24.634,-0.708,140.643)
O2': (25.862,-0.020,140.451)
N1: (23.751,-2.602,142.065)
N3: (23.208,-4.524,143.384)
N4: (21.313,-5.716,142.946)
C6: (22.601,-2.772,141.347)
C5: (21.775,-3.789,141.611)
O3': (23.546,1.538,140.280)
C4: (24.780,-3.583,138.024)
N3: (24.204,-4.584,138.794)
OP1: (19.062,-1.277,133.226)
OP2: (20.394,-0.105,135.060)
C2: (22.875,-4.987,138.814)
C1': (20.582,-4.693,137.920)
C3': (18.317,-4.035,137.669)
O5': (19.223,-2.292,135.513)
O4': (20.244,-4.935,136.568)
C5': (18.783,-3.599,135.170)
P: (19.913,-1.366,134.427)
C4': (18.862,-4.558,136.336)
C2': (19.585,-3.633,138.417)
O2': (19.450,-3.645,139.824)
N1: (22.023,-4.283,137.965)
O4: (25.996,-3.336,138.128)
O2: (22.470,-5.889,139.540)
C6: (22.543,-3.284,137.154)
C5: (23.841,-2.916,137.161)
O3': (17.671,-5.100,138.378)
N3: (24.204,-4.584,138.794)
OP1: (19.062,-1.277,133.226)
OP2: (20.394,-0.105,135.060)
C2: (22.875,-4.987,138.814)
C1': (20.582,-4.693,137.920)
C3': (18.317,-4.035,137.669)
O5': (19.223,-2.292,135.513)
O4': (20.244,-4.935,136.568)
C5': (18.783,-3.599,135.170)
P: (19.913,-1.366,134.427)
C4': (18.862,-4.558,136.336)
C2': (19.585,-3.633,138.417)
O2': (19.450,-3.645,139.824)
N1: (22.023,-4.283,137.965)
O4: (25.996,-3.336,138.128)
O2: (22.470,-5.889,139.540)
C6: (22.543,-3.284,137.154)
C5: (23.841,-2.916,137.161)
O3': (17.671,-5.100,138.378)
Image (generated by PyMOL):