Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DK1:B47:B45
Extra
PDB:
ATOM 1 O3' C A 46 -7.969 59.101 9.021 1.00 92.23 O
ATOM 2 P C A 47 -7.814 58.011 7.857 1.00 92.64 P
ATOM 3 OP1 C A 47 -8.274 58.643 6.591 1.00 85.80 O
ATOM 4 OP2 C A 47 -8.467 56.761 8.345 1.00 70.96 O
ATOM 5 O5' C A 47 -6.239 57.791 7.730 1.00 87.08 O
ATOM 6 C5' C A 47 -5.516 58.280 6.583 1.00 69.68 C
ATOM 7 C4' C A 47 -4.101 57.744 6.588 1.00 66.06 C
ATOM 8 O4' C A 47 -3.325 58.395 7.629 1.00 61.21 O
ATOM 9 C3' C A 47 -3.964 56.259 6.873 1.00 59.76 C
ATOM 10 O3' C A 47 -4.169 55.480 5.693 1.00 54.26 O
ATOM 11 C2' C A 47 -2.532 56.171 7.390 1.00 59.75 C
ATOM 12 O2' C A 47 -1.588 56.213 6.344 1.00 69.50 O
ATOM 13 C1' C A 47 -2.421 57.465 8.205 1.00 55.27 C
ATOM 14 N1 C A 47 -2.780 57.306 9.632 1.00 45.25 N
ATOM 15 C2 C A 47 -2.035 56.436 10.430 1.00 37.83 C
ATOM 16 O2 C A 47 -1.038 55.885 9.942 1.00 52.24 O
ATOM 17 N3 C A 47 -2.410 56.231 11.714 1.00 26.42 N
ATOM 18 C4 C A 47 -3.464 56.887 12.211 1.00 38.24 C
ATOM 19 N4 C A 47 -3.828 56.644 13.476 1.00 40.04 N
ATOM 20 C5 C A 47 -4.204 57.816 11.433 1.00 24.48 C
ATOM 21 C6 C A 47 -3.837 57.987 10.161 1.00 26.25 C
ATOM 22 P G A 48 -4.916 54.060 5.794 1.00 47.68 P
ATOM 23 OP1 G A 48 -5.270 53.636 4.430 1.00 51.34 O
ATOM 24 OP2 G A 48 -5.955 54.135 6.828 1.00 44.46 O
ATOM 25 O5' G A 48 -3.804 53.080 6.373 1.00 58.80 O
TER
ATOM 1 O3' A B 44 -8.083 64.173 17.487 1.00 63.05 O
ATOM 2 P C B 45 -8.831 63.064 16.591 1.00 69.57 P
ATOM 3 OP1 C B 45 -10.241 63.454 16.333 1.00 54.46 O
ATOM 4 OP2 C B 45 -8.543 61.738 17.200 1.00 67.28 O
ATOM 5 O5' C B 45 -8.031 63.148 15.223 1.00 44.86 O
ATOM 6 C5' C B 45 -7.446 64.377 14.803 1.00 61.26 C
ATOM 7 C4' C B 45 -6.564 64.139 13.616 1.00 81.42 C
ATOM 8 O4' C B 45 -5.325 63.505 14.034 1.00 90.58 O
ATOM 9 C3' C B 45 -7.196 63.214 12.589 1.00 96.12 C
ATOM 10 O3' C B 45 -6.877 63.653 11.287 1.00111.44 O
ATOM 11 C2' C B 45 -6.583 61.859 12.919 1.00 92.71 C
ATOM 12 O2' C B 45 -6.532 60.970 11.821 1.00 99.12 O
ATOM 13 C1' C B 45 -5.184 62.254 13.382 1.00 88.18 C
ATOM 14 N1 C B 45 -4.661 61.288 14.361 1.00 78.13 N
ATOM 15 C2 C B 45 -3.456 60.629 14.092 1.00 76.42 C
ATOM 16 O2 C B 45 -2.848 60.892 13.037 1.00 69.19 O
ATOM 17 N3 C B 45 -2.988 59.722 14.984 1.00 69.27 N
ATOM 18 C4 C B 45 -3.681 59.463 16.095 1.00 74.00 C
ATOM 19 N4 C B 45 -3.207 58.541 16.928 1.00 83.69 N
ATOM 20 C5 C B 45 -4.901 60.133 16.397 1.00 79.99 C
ATOM 21 C6 C B 45 -5.349 61.028 15.513 1.00 76.33 C
ATOM 22 P C B 46 -7.998 64.418 10.436 1.00115.87 P
ATOM 23 OP1 C B 46 -7.679 65.872 10.422 1.00111.28 O
ATOM 24 OP2 C B 46 -9.308 63.956 10.980 1.00102.13 O
ATOM 25 O5' C B 46 -7.808 63.837 8.967 1.00115.40 O
TER
ATOM 2 P C A 47 -7.814 58.011 7.857 1.00 92.64 P
ATOM 3 OP1 C A 47 -8.274 58.643 6.591 1.00 85.80 O
ATOM 4 OP2 C A 47 -8.467 56.761 8.345 1.00 70.96 O
ATOM 5 O5' C A 47 -6.239 57.791 7.730 1.00 87.08 O
ATOM 6 C5' C A 47 -5.516 58.280 6.583 1.00 69.68 C
ATOM 7 C4' C A 47 -4.101 57.744 6.588 1.00 66.06 C
ATOM 8 O4' C A 47 -3.325 58.395 7.629 1.00 61.21 O
ATOM 9 C3' C A 47 -3.964 56.259 6.873 1.00 59.76 C
ATOM 10 O3' C A 47 -4.169 55.480 5.693 1.00 54.26 O
ATOM 11 C2' C A 47 -2.532 56.171 7.390 1.00 59.75 C
ATOM 12 O2' C A 47 -1.588 56.213 6.344 1.00 69.50 O
ATOM 13 C1' C A 47 -2.421 57.465 8.205 1.00 55.27 C
ATOM 14 N1 C A 47 -2.780 57.306 9.632 1.00 45.25 N
ATOM 15 C2 C A 47 -2.035 56.436 10.430 1.00 37.83 C
ATOM 16 O2 C A 47 -1.038 55.885 9.942 1.00 52.24 O
ATOM 17 N3 C A 47 -2.410 56.231 11.714 1.00 26.42 N
ATOM 18 C4 C A 47 -3.464 56.887 12.211 1.00 38.24 C
ATOM 19 N4 C A 47 -3.828 56.644 13.476 1.00 40.04 N
ATOM 20 C5 C A 47 -4.204 57.816 11.433 1.00 24.48 C
ATOM 21 C6 C A 47 -3.837 57.987 10.161 1.00 26.25 C
ATOM 22 P G A 48 -4.916 54.060 5.794 1.00 47.68 P
ATOM 23 OP1 G A 48 -5.270 53.636 4.430 1.00 51.34 O
ATOM 24 OP2 G A 48 -5.955 54.135 6.828 1.00 44.46 O
ATOM 25 O5' G A 48 -3.804 53.080 6.373 1.00 58.80 O
TER
ATOM 1 O3' A B 44 -8.083 64.173 17.487 1.00 63.05 O
ATOM 2 P C B 45 -8.831 63.064 16.591 1.00 69.57 P
ATOM 3 OP1 C B 45 -10.241 63.454 16.333 1.00 54.46 O
ATOM 4 OP2 C B 45 -8.543 61.738 17.200 1.00 67.28 O
ATOM 5 O5' C B 45 -8.031 63.148 15.223 1.00 44.86 O
ATOM 6 C5' C B 45 -7.446 64.377 14.803 1.00 61.26 C
ATOM 7 C4' C B 45 -6.564 64.139 13.616 1.00 81.42 C
ATOM 8 O4' C B 45 -5.325 63.505 14.034 1.00 90.58 O
ATOM 9 C3' C B 45 -7.196 63.214 12.589 1.00 96.12 C
ATOM 10 O3' C B 45 -6.877 63.653 11.287 1.00111.44 O
ATOM 11 C2' C B 45 -6.583 61.859 12.919 1.00 92.71 C
ATOM 12 O2' C B 45 -6.532 60.970 11.821 1.00 99.12 O
ATOM 13 C1' C B 45 -5.184 62.254 13.382 1.00 88.18 C
ATOM 14 N1 C B 45 -4.661 61.288 14.361 1.00 78.13 N
ATOM 15 C2 C B 45 -3.456 60.629 14.092 1.00 76.42 C
ATOM 16 O2 C B 45 -2.848 60.892 13.037 1.00 69.19 O
ATOM 17 N3 C B 45 -2.988 59.722 14.984 1.00 69.27 N
ATOM 18 C4 C B 45 -3.681 59.463 16.095 1.00 74.00 C
ATOM 19 N4 C B 45 -3.207 58.541 16.928 1.00 83.69 N
ATOM 20 C5 C B 45 -4.901 60.133 16.397 1.00 79.99 C
ATOM 21 C6 C B 45 -5.349 61.028 15.513 1.00 76.33 C
ATOM 22 P C B 46 -7.998 64.418 10.436 1.00115.87 P
ATOM 23 OP1 C B 46 -7.679 65.872 10.422 1.00111.28 O
ATOM 24 OP2 C B 46 -9.308 63.956 10.980 1.00102.13 O
ATOM 25 O5' C B 46 -7.808 63.837 8.967 1.00115.40 O
TER
Atoms:
C2: (-2.035,56.436,10.430)
OP1: (-8.274,58.643,6.591)
OP2: (-8.467,56.761,8.345)
C4: (-3.464,56.887,12.211)
O5': (-6.239,57.791,7.730)
C3': (-3.964,56.259,6.873)
C1': (-2.421,57.465,8.205)
O4': (-3.325,58.395,7.629)
C5': (-5.516,58.280,6.583)
P: (-7.814,58.011,7.857)
O2: (-1.038,55.885,9.942)
C4': (-4.101,57.744,6.588)
C2': (-2.532,56.171,7.390)
O2': (-1.588,56.213,6.344)
N1: (-2.780,57.306,9.632)
N3: (-2.410,56.231,11.714)
N4: (-3.828,56.644,13.476)
C6: (-3.837,57.987,10.161)
C5: (-4.204,57.816,11.433)
O3': (-4.169,55.480,5.693)
OP1: (-8.274,58.643,6.591)
OP2: (-8.467,56.761,8.345)
C4: (-3.464,56.887,12.211)
O5': (-6.239,57.791,7.730)
C3': (-3.964,56.259,6.873)
C1': (-2.421,57.465,8.205)
O4': (-3.325,58.395,7.629)
C5': (-5.516,58.280,6.583)
P: (-7.814,58.011,7.857)
O2: (-1.038,55.885,9.942)
C4': (-4.101,57.744,6.588)
C2': (-2.532,56.171,7.390)
O2': (-1.588,56.213,6.344)
N1: (-2.780,57.306,9.632)
N3: (-2.410,56.231,11.714)
N4: (-3.828,56.644,13.476)
C6: (-3.837,57.987,10.161)
C5: (-4.204,57.816,11.433)
O3': (-4.169,55.480,5.693)
C2: (-3.456,60.629,14.092)
OP1: (-10.241,63.454,16.333)
OP2: (-8.543,61.738,17.200)
C4: (-3.681,59.463,16.095)
O5': (-8.031,63.148,15.223)
C3': (-7.196,63.214,12.589)
C1': (-5.184,62.254,13.382)
O4': (-5.325,63.505,14.034)
C5': (-7.446,64.377,14.803)
P: (-8.831,63.064,16.591)
O2: (-2.848,60.892,13.037)
C4': (-6.564,64.139,13.616)
C2': (-6.583,61.859,12.919)
O2': (-6.532,60.970,11.821)
N1: (-4.661,61.288,14.361)
N3: (-2.988,59.722,14.984)
N4: (-3.207,58.541,16.928)
C6: (-5.349,61.028,15.513)
C5: (-4.901,60.133,16.397)
O3': (-6.877,63.653,11.287)
OP1: (-10.241,63.454,16.333)
OP2: (-8.543,61.738,17.200)
C4: (-3.681,59.463,16.095)
O5': (-8.031,63.148,15.223)
C3': (-7.196,63.214,12.589)
C1': (-5.184,62.254,13.382)
O4': (-5.325,63.505,14.034)
C5': (-7.446,64.377,14.803)
P: (-8.831,63.064,16.591)
O2: (-2.848,60.892,13.037)
C4': (-6.564,64.139,13.616)
C2': (-6.583,61.859,12.919)
O2': (-6.532,60.970,11.821)
N1: (-4.661,61.288,14.361)
N3: (-2.988,59.722,14.984)
N4: (-3.207,58.541,16.928)
C6: (-5.349,61.028,15.513)
C5: (-4.901,60.133,16.397)
O3': (-6.877,63.653,11.287)
Image (generated by PyMOL):