Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A902:A1002
Extra
PDB:
ATOM 1 O3' A A 901 51.569 92.492 89.022 1.00 33.43 O
ATOM 2 P C A 902 51.986 91.602 90.271 1.00 32.85 P
ATOM 3 OP1 C A 902 50.970 91.875 91.308 1.00 31.71 O
ATOM 4 OP2 C A 902 53.428 91.850 90.552 1.00 31.41 O
ATOM 5 O5' C A 902 51.803 90.109 89.760 1.00 31.39 O
ATOM 6 C5' C A 902 52.816 89.500 88.972 1.00 32.61 C
ATOM 7 C4' C A 902 52.385 88.145 88.522 1.00 33.40 C
ATOM 8 O4' C A 902 51.148 88.236 87.788 1.00 32.94 O
ATOM 9 C3' C A 902 53.366 87.510 87.564 1.00 33.59 C
ATOM 10 O3' C A 902 54.338 86.823 88.328 1.00 34.44 O
ATOM 11 C2' C A 902 52.490 86.540 86.799 1.00 33.81 C
ATOM 12 O2' C A 902 52.270 85.386 87.571 1.00 35.00 O
ATOM 13 C1' C A 902 51.181 87.329 86.702 1.00 33.86 C
ATOM 14 N1 C A 902 51.026 88.082 85.442 1.00 35.50 N
ATOM 15 C2 C A 902 50.967 87.371 84.262 1.00 37.90 C
ATOM 16 O2 C A 902 50.980 86.136 84.307 1.00 40.41 O
ATOM 17 N3 C A 902 50.886 88.027 83.095 1.00 38.46 N
ATOM 18 C4 C A 902 50.845 89.351 83.079 1.00 37.75 C
ATOM 19 N4 C A 902 50.792 89.950 81.893 1.00 38.13 N
ATOM 20 C5 C A 902 50.864 90.115 84.274 1.00 36.26 C
ATOM 21 C6 C A 902 50.956 89.445 85.425 1.00 35.58 C
ATOM 22 P A A 903 55.755 86.494 87.687 1.00 35.48 P
ATOM 23 OP1 A A 903 56.603 86.019 88.801 1.00 37.36 O
ATOM 24 OP2 A A 903 56.173 87.685 86.916 1.00 37.33 O
ATOM 25 O5' A A 903 55.441 85.305 86.669 1.00 38.79 O
TER
ATOM 1 O3' U B1001 48.928 96.610 83.124 1.00 30.43 O
ATOM 2 P C B1002 50.403 97.213 83.252 1.00 29.10 P
ATOM 3 OP1 C B1002 50.448 97.987 84.510 1.00 27.76 O
ATOM 4 OP2 C B1002 50.708 97.871 81.977 1.00 28.54 O
ATOM 5 O5' C B1002 51.345 95.933 83.330 1.00 30.20 O
ATOM 6 C5' C B1002 51.186 94.959 84.364 1.00 33.91 C
ATOM 7 C4' C B1002 52.222 93.866 84.249 1.00 36.73 C
ATOM 8 O4' C B1002 52.018 93.117 83.030 1.00 37.81 O
ATOM 9 C3' C B1002 53.674 94.277 84.122 1.00 38.77 C
ATOM 10 O3' C B1002 54.208 94.701 85.369 1.00 40.13 O
ATOM 11 C2' C B1002 54.316 92.981 83.620 1.00 39.61 C
ATOM 12 O2' C B1002 54.499 92.033 84.653 1.00 42.40 O
ATOM 13 C1' C B1002 53.217 92.432 82.705 1.00 38.12 C
ATOM 14 N1 C B1002 53.453 92.537 81.252 1.00 36.80 N
ATOM 15 C2 C B1002 54.271 91.588 80.621 1.00 36.88 C
ATOM 16 O2 C B1002 54.843 90.732 81.307 1.00 36.50 O
ATOM 17 N3 C B1002 54.427 91.642 79.279 1.00 36.98 N
ATOM 18 C4 C B1002 53.836 92.610 78.575 1.00 35.97 C
ATOM 19 N4 C B1002 54.022 92.626 77.250 1.00 36.12 N
ATOM 20 C5 C B1002 53.030 93.607 79.195 1.00 36.00 C
ATOM 21 C6 C B1002 52.865 93.532 80.521 1.00 36.24 C
ATOM 22 P C B1003 55.311 95.865 85.408 1.00 39.69 P
ATOM 23 OP1 C B1003 55.803 96.068 84.032 1.00 42.30 O
ATOM 24 OP2 C B1003 56.257 95.524 86.494 1.00 40.57 O
ATOM 25 O5' C B1003 54.523 97.199 85.777 1.00 39.99 O
TER
ATOM 2 P C A 902 51.986 91.602 90.271 1.00 32.85 P
ATOM 3 OP1 C A 902 50.970 91.875 91.308 1.00 31.71 O
ATOM 4 OP2 C A 902 53.428 91.850 90.552 1.00 31.41 O
ATOM 5 O5' C A 902 51.803 90.109 89.760 1.00 31.39 O
ATOM 6 C5' C A 902 52.816 89.500 88.972 1.00 32.61 C
ATOM 7 C4' C A 902 52.385 88.145 88.522 1.00 33.40 C
ATOM 8 O4' C A 902 51.148 88.236 87.788 1.00 32.94 O
ATOM 9 C3' C A 902 53.366 87.510 87.564 1.00 33.59 C
ATOM 10 O3' C A 902 54.338 86.823 88.328 1.00 34.44 O
ATOM 11 C2' C A 902 52.490 86.540 86.799 1.00 33.81 C
ATOM 12 O2' C A 902 52.270 85.386 87.571 1.00 35.00 O
ATOM 13 C1' C A 902 51.181 87.329 86.702 1.00 33.86 C
ATOM 14 N1 C A 902 51.026 88.082 85.442 1.00 35.50 N
ATOM 15 C2 C A 902 50.967 87.371 84.262 1.00 37.90 C
ATOM 16 O2 C A 902 50.980 86.136 84.307 1.00 40.41 O
ATOM 17 N3 C A 902 50.886 88.027 83.095 1.00 38.46 N
ATOM 18 C4 C A 902 50.845 89.351 83.079 1.00 37.75 C
ATOM 19 N4 C A 902 50.792 89.950 81.893 1.00 38.13 N
ATOM 20 C5 C A 902 50.864 90.115 84.274 1.00 36.26 C
ATOM 21 C6 C A 902 50.956 89.445 85.425 1.00 35.58 C
ATOM 22 P A A 903 55.755 86.494 87.687 1.00 35.48 P
ATOM 23 OP1 A A 903 56.603 86.019 88.801 1.00 37.36 O
ATOM 24 OP2 A A 903 56.173 87.685 86.916 1.00 37.33 O
ATOM 25 O5' A A 903 55.441 85.305 86.669 1.00 38.79 O
TER
ATOM 1 O3' U B1001 48.928 96.610 83.124 1.00 30.43 O
ATOM 2 P C B1002 50.403 97.213 83.252 1.00 29.10 P
ATOM 3 OP1 C B1002 50.448 97.987 84.510 1.00 27.76 O
ATOM 4 OP2 C B1002 50.708 97.871 81.977 1.00 28.54 O
ATOM 5 O5' C B1002 51.345 95.933 83.330 1.00 30.20 O
ATOM 6 C5' C B1002 51.186 94.959 84.364 1.00 33.91 C
ATOM 7 C4' C B1002 52.222 93.866 84.249 1.00 36.73 C
ATOM 8 O4' C B1002 52.018 93.117 83.030 1.00 37.81 O
ATOM 9 C3' C B1002 53.674 94.277 84.122 1.00 38.77 C
ATOM 10 O3' C B1002 54.208 94.701 85.369 1.00 40.13 O
ATOM 11 C2' C B1002 54.316 92.981 83.620 1.00 39.61 C
ATOM 12 O2' C B1002 54.499 92.033 84.653 1.00 42.40 O
ATOM 13 C1' C B1002 53.217 92.432 82.705 1.00 38.12 C
ATOM 14 N1 C B1002 53.453 92.537 81.252 1.00 36.80 N
ATOM 15 C2 C B1002 54.271 91.588 80.621 1.00 36.88 C
ATOM 16 O2 C B1002 54.843 90.732 81.307 1.00 36.50 O
ATOM 17 N3 C B1002 54.427 91.642 79.279 1.00 36.98 N
ATOM 18 C4 C B1002 53.836 92.610 78.575 1.00 35.97 C
ATOM 19 N4 C B1002 54.022 92.626 77.250 1.00 36.12 N
ATOM 20 C5 C B1002 53.030 93.607 79.195 1.00 36.00 C
ATOM 21 C6 C B1002 52.865 93.532 80.521 1.00 36.24 C
ATOM 22 P C B1003 55.311 95.865 85.408 1.00 39.69 P
ATOM 23 OP1 C B1003 55.803 96.068 84.032 1.00 42.30 O
ATOM 24 OP2 C B1003 56.257 95.524 86.494 1.00 40.57 O
ATOM 25 O5' C B1003 54.523 97.199 85.777 1.00 39.99 O
TER
Atoms:
C2: (50.967,87.371,84.262)
OP1: (50.970,91.875,91.308)
OP2: (53.428,91.850,90.552)
C4: (50.845,89.351,83.079)
O5': (51.803,90.109,89.760)
C3': (53.366,87.510,87.564)
C1': (51.181,87.329,86.702)
O4': (51.148,88.236,87.788)
C5': (52.816,89.500,88.972)
P: (51.986,91.602,90.271)
O2: (50.980,86.136,84.307)
C4': (52.385,88.145,88.522)
C2': (52.490,86.540,86.799)
O2': (52.270,85.386,87.571)
N1: (51.026,88.082,85.442)
N3: (50.886,88.027,83.095)
N4: (50.792,89.950,81.893)
C6: (50.956,89.445,85.425)
C5: (50.864,90.115,84.274)
O3': (54.338,86.823,88.328)
OP1: (50.970,91.875,91.308)
OP2: (53.428,91.850,90.552)
C4: (50.845,89.351,83.079)
O5': (51.803,90.109,89.760)
C3': (53.366,87.510,87.564)
C1': (51.181,87.329,86.702)
O4': (51.148,88.236,87.788)
C5': (52.816,89.500,88.972)
P: (51.986,91.602,90.271)
O2: (50.980,86.136,84.307)
C4': (52.385,88.145,88.522)
C2': (52.490,86.540,86.799)
O2': (52.270,85.386,87.571)
N1: (51.026,88.082,85.442)
N3: (50.886,88.027,83.095)
N4: (50.792,89.950,81.893)
C6: (50.956,89.445,85.425)
C5: (50.864,90.115,84.274)
O3': (54.338,86.823,88.328)
C2: (54.271,91.588,80.621)
OP1: (50.448,97.987,84.510)
OP2: (50.708,97.871,81.977)
C4: (53.836,92.610,78.575)
O5': (51.345,95.933,83.330)
C3': (53.674,94.277,84.122)
C1': (53.217,92.432,82.705)
O4': (52.018,93.117,83.030)
C5': (51.186,94.959,84.364)
P: (50.403,97.213,83.252)
O2: (54.843,90.732,81.307)
C4': (52.222,93.866,84.249)
C2': (54.316,92.981,83.620)
O2': (54.499,92.033,84.653)
N1: (53.453,92.537,81.252)
N3: (54.427,91.642,79.279)
N4: (54.022,92.626,77.250)
C6: (52.865,93.532,80.521)
C5: (53.030,93.607,79.195)
O3': (54.208,94.701,85.369)
OP1: (50.448,97.987,84.510)
OP2: (50.708,97.871,81.977)
C4: (53.836,92.610,78.575)
O5': (51.345,95.933,83.330)
C3': (53.674,94.277,84.122)
C1': (53.217,92.432,82.705)
O4': (52.018,93.117,83.030)
C5': (51.186,94.959,84.364)
P: (50.403,97.213,83.252)
O2: (54.843,90.732,81.307)
C4': (52.222,93.866,84.249)
C2': (54.316,92.981,83.620)
O2': (54.499,92.033,84.653)
N1: (53.453,92.537,81.252)
N3: (54.427,91.642,79.279)
N4: (54.022,92.626,77.250)
C6: (52.865,93.532,80.521)
C5: (53.030,93.607,79.195)
O3': (54.208,94.701,85.369)
Image (generated by PyMOL):