Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2561:2562
Extra
PDB:
ATOM 1 O3' G A 560 -71.854 -2.636 29.584 1.00 88.05 O
ATOM 2 P G A 561 -70.941 -3.631 30.470 1.00 88.80 P
ATOM 3 OP1 G A 561 -70.470 -4.704 29.556 1.00 89.58 O
ATOM 4 OP2 G A 561 -71.740 -4.018 31.659 1.00 88.62 O
ATOM 5 O5' G A 561 -69.706 -2.697 30.926 1.00 87.34 O
ATOM 6 C5' G A 561 -68.971 -1.928 29.976 1.00 87.28 C
ATOM 7 C4' G A 561 -68.046 -0.937 30.638 1.00 85.89 C
ATOM 8 O4' G A 561 -68.820 0.033 31.396 1.00 85.49 O
ATOM 9 C3' G A 561 -67.068 -1.504 31.653 1.00 84.79 C
ATOM 10 O3' G A 561 -65.927 -2.100 31.068 1.00 84.76 O
ATOM 11 C2' G A 561 -66.754 -0.297 32.546 1.00 83.56 C
ATOM 12 O2' G A 561 -65.781 0.552 31.951 1.00 83.12 O
ATOM 13 C1' G A 561 -68.105 0.429 32.560 1.00 84.11 C
ATOM 14 N9 G A 561 -68.896 0.072 33.761 1.00 83.89 N
ATOM 15 C8 G A 561 -69.910 -0.848 33.939 1.00 84.72 C
ATOM 16 N7 G A 561 -70.337 -0.928 35.173 1.00 84.20 N
ATOM 17 C5 G A 561 -69.552 -0.008 35.845 1.00 82.95 C
ATOM 18 C6 G A 561 -69.534 0.376 37.208 1.00 81.95 C
ATOM 19 O6 G A 561 -70.251 -0.047 38.116 1.00 81.97 O
ATOM 20 N1 G A 561 -68.574 1.344 37.471 1.00 80.87 N
ATOM 21 C2 G A 561 -67.725 1.877 36.527 1.00 80.78 C
ATOM 22 N2 G A 561 -66.836 2.812 36.919 1.00 79.71 N
ATOM 23 N3 G A 561 -67.738 1.524 35.256 1.00 81.72 N
ATOM 24 C4 G A 561 -68.663 0.593 34.994 1.00 82.76 C
ATOM 25 P U A 562 -65.356 -3.484 31.663 1.00 93.39 P
ATOM 26 OP1 U A 562 -64.371 -4.012 30.684 1.00 93.72 O
ATOM 27 OP2 U A 562 -66.523 -4.316 32.022 1.00 94.13 O
ATOM 28 O5' U A 562 -64.607 -3.016 32.983 1.00 91.89 O
TER
ATOM 1 O3' G B 561 -65.927 -2.100 31.068 1.00 84.76 O
ATOM 2 P U B 562 -65.356 -3.484 31.663 1.00 93.39 P
ATOM 3 OP1 U B 562 -64.371 -4.012 30.684 1.00 93.72 O
ATOM 4 OP2 U B 562 -66.523 -4.316 32.022 1.00 94.13 O
ATOM 5 O5' U B 562 -64.607 -3.016 32.983 1.00 91.89 O
ATOM 6 C5' U B 562 -63.615 -2.009 32.932 1.00 90.99 C
ATOM 7 C4' U B 562 -63.235 -1.560 34.305 1.00 89.71 C
ATOM 8 O4' U B 562 -64.370 -0.946 34.947 1.00 89.69 O
ATOM 9 C3' U B 562 -62.800 -2.657 35.259 1.00 89.28 C
ATOM 10 O3' U B 562 -61.433 -2.975 35.096 1.00 88.80 O
ATOM 11 C2' U B 562 -63.122 -2.079 36.639 1.00 88.36 C
ATOM 12 O2' U B 562 -62.036 -1.299 37.123 1.00 87.20 O
ATOM 13 C1' U B 562 -64.302 -1.146 36.341 1.00 88.84 C
ATOM 14 N1 U B 562 -65.592 -1.701 36.789 1.00 89.47 N
ATOM 15 C2 U B 562 -65.993 -1.593 38.121 1.00 88.84 C
ATOM 16 O2 U B 562 -65.324 -1.074 39.013 1.00 87.74 O
ATOM 17 N3 U B 562 -67.235 -2.149 38.370 1.00 89.61 N
ATOM 18 C4 U B 562 -68.073 -2.758 37.465 1.00 90.88 C
ATOM 19 O4 U B 562 -69.157 -3.198 37.830 1.00 91.47 O
ATOM 20 C5 U B 562 -67.578 -2.809 36.133 1.00 91.44 C
ATOM 21 C6 U B 562 -66.393 -2.290 35.841 1.00 90.75 C
ATOM 22 P G B 563 -60.926 -4.496 35.115 1.00 82.49 P
ATOM 23 OP1 G B 563 -59.453 -4.467 34.812 1.00 81.94 O
ATOM 24 OP2 G B 563 -61.823 -5.278 34.225 1.00 83.84 O
ATOM 25 O5' G B 563 -61.166 -4.918 36.626 1.00 81.84 O
TER
ATOM 2 P G A 561 -70.941 -3.631 30.470 1.00 88.80 P
ATOM 3 OP1 G A 561 -70.470 -4.704 29.556 1.00 89.58 O
ATOM 4 OP2 G A 561 -71.740 -4.018 31.659 1.00 88.62 O
ATOM 5 O5' G A 561 -69.706 -2.697 30.926 1.00 87.34 O
ATOM 6 C5' G A 561 -68.971 -1.928 29.976 1.00 87.28 C
ATOM 7 C4' G A 561 -68.046 -0.937 30.638 1.00 85.89 C
ATOM 8 O4' G A 561 -68.820 0.033 31.396 1.00 85.49 O
ATOM 9 C3' G A 561 -67.068 -1.504 31.653 1.00 84.79 C
ATOM 10 O3' G A 561 -65.927 -2.100 31.068 1.00 84.76 O
ATOM 11 C2' G A 561 -66.754 -0.297 32.546 1.00 83.56 C
ATOM 12 O2' G A 561 -65.781 0.552 31.951 1.00 83.12 O
ATOM 13 C1' G A 561 -68.105 0.429 32.560 1.00 84.11 C
ATOM 14 N9 G A 561 -68.896 0.072 33.761 1.00 83.89 N
ATOM 15 C8 G A 561 -69.910 -0.848 33.939 1.00 84.72 C
ATOM 16 N7 G A 561 -70.337 -0.928 35.173 1.00 84.20 N
ATOM 17 C5 G A 561 -69.552 -0.008 35.845 1.00 82.95 C
ATOM 18 C6 G A 561 -69.534 0.376 37.208 1.00 81.95 C
ATOM 19 O6 G A 561 -70.251 -0.047 38.116 1.00 81.97 O
ATOM 20 N1 G A 561 -68.574 1.344 37.471 1.00 80.87 N
ATOM 21 C2 G A 561 -67.725 1.877 36.527 1.00 80.78 C
ATOM 22 N2 G A 561 -66.836 2.812 36.919 1.00 79.71 N
ATOM 23 N3 G A 561 -67.738 1.524 35.256 1.00 81.72 N
ATOM 24 C4 G A 561 -68.663 0.593 34.994 1.00 82.76 C
ATOM 25 P U A 562 -65.356 -3.484 31.663 1.00 93.39 P
ATOM 26 OP1 U A 562 -64.371 -4.012 30.684 1.00 93.72 O
ATOM 27 OP2 U A 562 -66.523 -4.316 32.022 1.00 94.13 O
ATOM 28 O5' U A 562 -64.607 -3.016 32.983 1.00 91.89 O
TER
ATOM 1 O3' G B 561 -65.927 -2.100 31.068 1.00 84.76 O
ATOM 2 P U B 562 -65.356 -3.484 31.663 1.00 93.39 P
ATOM 3 OP1 U B 562 -64.371 -4.012 30.684 1.00 93.72 O
ATOM 4 OP2 U B 562 -66.523 -4.316 32.022 1.00 94.13 O
ATOM 5 O5' U B 562 -64.607 -3.016 32.983 1.00 91.89 O
ATOM 6 C5' U B 562 -63.615 -2.009 32.932 1.00 90.99 C
ATOM 7 C4' U B 562 -63.235 -1.560 34.305 1.00 89.71 C
ATOM 8 O4' U B 562 -64.370 -0.946 34.947 1.00 89.69 O
ATOM 9 C3' U B 562 -62.800 -2.657 35.259 1.00 89.28 C
ATOM 10 O3' U B 562 -61.433 -2.975 35.096 1.00 88.80 O
ATOM 11 C2' U B 562 -63.122 -2.079 36.639 1.00 88.36 C
ATOM 12 O2' U B 562 -62.036 -1.299 37.123 1.00 87.20 O
ATOM 13 C1' U B 562 -64.302 -1.146 36.341 1.00 88.84 C
ATOM 14 N1 U B 562 -65.592 -1.701 36.789 1.00 89.47 N
ATOM 15 C2 U B 562 -65.993 -1.593 38.121 1.00 88.84 C
ATOM 16 O2 U B 562 -65.324 -1.074 39.013 1.00 87.74 O
ATOM 17 N3 U B 562 -67.235 -2.149 38.370 1.00 89.61 N
ATOM 18 C4 U B 562 -68.073 -2.758 37.465 1.00 90.88 C
ATOM 19 O4 U B 562 -69.157 -3.198 37.830 1.00 91.47 O
ATOM 20 C5 U B 562 -67.578 -2.809 36.133 1.00 91.44 C
ATOM 21 C6 U B 562 -66.393 -2.290 35.841 1.00 90.75 C
ATOM 22 P G B 563 -60.926 -4.496 35.115 1.00 82.49 P
ATOM 23 OP1 G B 563 -59.453 -4.467 34.812 1.00 81.94 O
ATOM 24 OP2 G B 563 -61.823 -5.278 34.225 1.00 83.84 O
ATOM 25 O5' G B 563 -61.166 -4.918 36.626 1.00 81.84 O
TER
Atoms:
OP1: (-70.470,-4.704,29.556)
OP2: (-71.740,-4.018,31.659)
C3': (-67.068,-1.504,31.653)
C1': (-68.105,0.429,32.560)
C5': (-68.971,-1.928,29.976)
O6: (-70.251,-0.047,38.116)
O4': (-68.820,0.033,31.396)
C8: (-69.910,-0.848,33.939)
C2: (-67.725,1.877,36.527)
C6: (-69.534,0.376,37.208)
C5: (-69.552,-0.008,35.845)
C4: (-68.663,0.593,34.994)
P: (-70.941,-3.631,30.470)
C4': (-68.046,-0.937,30.638)
C2': (-66.754,-0.297,32.546)
O2': (-65.781,0.552,31.951)
N1: (-68.574,1.344,37.471)
N2: (-66.836,2.812,36.919)
N3: (-67.738,1.524,35.256)
N7: (-70.337,-0.928,35.173)
N9: (-68.896,0.072,33.761)
O5': (-69.706,-2.697,30.926)
O3': (-65.927,-2.100,31.068)
OP2: (-71.740,-4.018,31.659)
C3': (-67.068,-1.504,31.653)
C1': (-68.105,0.429,32.560)
C5': (-68.971,-1.928,29.976)
O6: (-70.251,-0.047,38.116)
O4': (-68.820,0.033,31.396)
C8: (-69.910,-0.848,33.939)
C2: (-67.725,1.877,36.527)
C6: (-69.534,0.376,37.208)
C5: (-69.552,-0.008,35.845)
C4: (-68.663,0.593,34.994)
P: (-70.941,-3.631,30.470)
C4': (-68.046,-0.937,30.638)
C2': (-66.754,-0.297,32.546)
O2': (-65.781,0.552,31.951)
N1: (-68.574,1.344,37.471)
N2: (-66.836,2.812,36.919)
N3: (-67.738,1.524,35.256)
N7: (-70.337,-0.928,35.173)
N9: (-68.896,0.072,33.761)
O5': (-69.706,-2.697,30.926)
O3': (-65.927,-2.100,31.068)
C4: (-68.073,-2.758,37.465)
N3: (-67.235,-2.149,38.370)
OP1: (-64.371,-4.012,30.684)
OP2: (-66.523,-4.316,32.022)
C2: (-65.993,-1.593,38.121)
C1': (-64.302,-1.146,36.341)
C3': (-62.800,-2.657,35.259)
O5': (-64.607,-3.016,32.983)
O4': (-64.370,-0.946,34.947)
C5': (-63.615,-2.009,32.932)
P: (-65.356,-3.484,31.663)
C4': (-63.235,-1.560,34.305)
C2': (-63.122,-2.079,36.639)
O2': (-62.036,-1.299,37.123)
N1: (-65.592,-1.701,36.789)
O4: (-69.157,-3.198,37.830)
O2: (-65.324,-1.074,39.013)
C6: (-66.393,-2.290,35.841)
C5: (-67.578,-2.809,36.133)
O3': (-61.433,-2.975,35.096)
N3: (-67.235,-2.149,38.370)
OP1: (-64.371,-4.012,30.684)
OP2: (-66.523,-4.316,32.022)
C2: (-65.993,-1.593,38.121)
C1': (-64.302,-1.146,36.341)
C3': (-62.800,-2.657,35.259)
O5': (-64.607,-3.016,32.983)
O4': (-64.370,-0.946,34.947)
C5': (-63.615,-2.009,32.932)
P: (-65.356,-3.484,31.663)
C4': (-63.235,-1.560,34.305)
C2': (-63.122,-2.079,36.639)
O2': (-62.036,-1.299,37.123)
N1: (-65.592,-1.701,36.789)
O4: (-69.157,-3.198,37.830)
O2: (-65.324,-1.074,39.013)
C6: (-66.393,-2.290,35.841)
C5: (-67.578,-2.809,36.133)
O3': (-61.433,-2.975,35.096)
Image (generated by PyMOL):