Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02664:02663
Extra
PDB:
ATOM 1 O3' C A2663 7.975 166.576 120.105 1.00 96.67 O
ATOM 2 P C A2664 6.485 167.161 120.299 1.00 98.81 P
ATOM 3 OP1 C A2664 5.966 166.715 121.621 1.00 98.67 O
ATOM 4 OP2 C A2664 5.709 166.863 119.065 1.00 98.50 O
ATOM 5 O5' C A2664 6.710 168.733 120.376 1.00 98.74 O
ATOM 6 C5' C A2664 7.643 169.283 121.311 1.00 99.66 C
ATOM 7 C4' C A2664 8.608 170.205 120.608 1.00100.94 C
ATOM 8 O4' C A2664 9.317 169.472 119.571 1.00101.99 O
ATOM 9 C3' C A2664 8.005 171.429 119.927 1.00100.70 C
ATOM 10 O3' C A2664 8.925 172.507 120.048 1.00 99.17 O
ATOM 11 C2' C A2664 7.900 170.984 118.471 1.00101.72 C
ATOM 12 O2' C A2664 7.923 172.064 117.557 1.00101.58 O
ATOM 13 C1' C A2664 9.158 170.131 118.328 1.00103.02 C
ATOM 14 N1 C A2664 9.091 169.117 117.255 1.00105.50 N
ATOM 15 C2 C A2664 9.288 169.520 115.914 1.00106.54 C
ATOM 16 O2 C A2664 9.488 170.724 115.661 1.00106.48 O
ATOM 17 N3 C A2664 9.249 168.583 114.932 1.00106.99 N
ATOM 18 C4 C A2664 9.017 167.301 115.238 1.00107.31 C
ATOM 19 N4 C A2664 8.987 166.412 114.238 1.00106.49 N
ATOM 20 C5 C A2664 8.804 166.870 116.583 1.00107.25 C
ATOM 21 C6 C A2664 8.850 167.800 117.549 1.00106.26 C
ATOM 22 P G A2665 9.013 173.325 121.430 1.00 98.02 P
ATOM 23 OP1 G A2665 7.629 173.490 121.945 1.00 98.10 O
ATOM 24 OP2 G A2665 9.856 174.525 121.196 1.00 98.54 O
ATOM 25 O5' G A2665 9.787 172.335 122.413 1.00 96.44 O
TER
ATOM 1 O3' G B2662 11.569 168.418 124.876 1.00 81.04 O
ATOM 2 P C B2663 9.991 168.270 124.605 1.00 82.80 P
ATOM 3 OP1 C B2663 9.519 169.554 124.030 1.00 83.18 O
ATOM 4 OP2 C B2663 9.355 167.744 125.837 1.00 83.36 O
ATOM 5 O5' C B2663 9.891 167.136 123.491 1.00 83.95 O
ATOM 6 C5' C B2663 10.394 167.353 122.160 1.00 87.50 C
ATOM 7 C4' C B2663 10.071 166.164 121.283 1.00 91.06 C
ATOM 8 O4' C B2663 10.671 164.978 121.863 1.00 90.74 O
ATOM 9 C3' C B2663 8.593 165.816 121.150 1.00 93.13 C
ATOM 10 O3' C B2663 7.975 166.576 120.105 1.00 96.67 O
ATOM 11 C2' C B2663 8.628 164.329 120.810 1.00 92.14 C
ATOM 12 O2' C B2663 8.849 164.073 119.437 1.00 92.21 O
ATOM 13 C1' C B2663 9.841 163.857 121.618 1.00 90.89 C
ATOM 14 N1 C B2663 9.536 163.201 122.903 1.00 90.34 N
ATOM 15 C2 C B2663 9.117 161.858 122.893 1.00 90.46 C
ATOM 16 O2 C B2663 8.968 161.278 121.803 1.00 89.92 O
ATOM 17 N3 C B2663 8.883 161.231 124.068 1.00 90.51 N
ATOM 18 C4 C B2663 9.044 161.888 125.219 1.00 90.37 C
ATOM 19 N4 C B2663 8.824 161.220 126.354 1.00 90.04 N
ATOM 20 C5 C B2663 9.444 163.260 125.258 1.00 89.90 C
ATOM 21 C6 C B2663 9.676 163.870 124.089 1.00 89.58 C
ATOM 22 P C B2664 6.485 167.161 120.299 1.00 98.81 P
ATOM 23 OP1 C B2664 5.966 166.715 121.621 1.00 98.67 O
ATOM 24 OP2 C B2664 5.709 166.863 119.065 1.00 98.50 O
ATOM 25 O5' C B2664 6.710 168.733 120.376 1.00 98.74 O
TER
ATOM 2 P C A2664 6.485 167.161 120.299 1.00 98.81 P
ATOM 3 OP1 C A2664 5.966 166.715 121.621 1.00 98.67 O
ATOM 4 OP2 C A2664 5.709 166.863 119.065 1.00 98.50 O
ATOM 5 O5' C A2664 6.710 168.733 120.376 1.00 98.74 O
ATOM 6 C5' C A2664 7.643 169.283 121.311 1.00 99.66 C
ATOM 7 C4' C A2664 8.608 170.205 120.608 1.00100.94 C
ATOM 8 O4' C A2664 9.317 169.472 119.571 1.00101.99 O
ATOM 9 C3' C A2664 8.005 171.429 119.927 1.00100.70 C
ATOM 10 O3' C A2664 8.925 172.507 120.048 1.00 99.17 O
ATOM 11 C2' C A2664 7.900 170.984 118.471 1.00101.72 C
ATOM 12 O2' C A2664 7.923 172.064 117.557 1.00101.58 O
ATOM 13 C1' C A2664 9.158 170.131 118.328 1.00103.02 C
ATOM 14 N1 C A2664 9.091 169.117 117.255 1.00105.50 N
ATOM 15 C2 C A2664 9.288 169.520 115.914 1.00106.54 C
ATOM 16 O2 C A2664 9.488 170.724 115.661 1.00106.48 O
ATOM 17 N3 C A2664 9.249 168.583 114.932 1.00106.99 N
ATOM 18 C4 C A2664 9.017 167.301 115.238 1.00107.31 C
ATOM 19 N4 C A2664 8.987 166.412 114.238 1.00106.49 N
ATOM 20 C5 C A2664 8.804 166.870 116.583 1.00107.25 C
ATOM 21 C6 C A2664 8.850 167.800 117.549 1.00106.26 C
ATOM 22 P G A2665 9.013 173.325 121.430 1.00 98.02 P
ATOM 23 OP1 G A2665 7.629 173.490 121.945 1.00 98.10 O
ATOM 24 OP2 G A2665 9.856 174.525 121.196 1.00 98.54 O
ATOM 25 O5' G A2665 9.787 172.335 122.413 1.00 96.44 O
TER
ATOM 1 O3' G B2662 11.569 168.418 124.876 1.00 81.04 O
ATOM 2 P C B2663 9.991 168.270 124.605 1.00 82.80 P
ATOM 3 OP1 C B2663 9.519 169.554 124.030 1.00 83.18 O
ATOM 4 OP2 C B2663 9.355 167.744 125.837 1.00 83.36 O
ATOM 5 O5' C B2663 9.891 167.136 123.491 1.00 83.95 O
ATOM 6 C5' C B2663 10.394 167.353 122.160 1.00 87.50 C
ATOM 7 C4' C B2663 10.071 166.164 121.283 1.00 91.06 C
ATOM 8 O4' C B2663 10.671 164.978 121.863 1.00 90.74 O
ATOM 9 C3' C B2663 8.593 165.816 121.150 1.00 93.13 C
ATOM 10 O3' C B2663 7.975 166.576 120.105 1.00 96.67 O
ATOM 11 C2' C B2663 8.628 164.329 120.810 1.00 92.14 C
ATOM 12 O2' C B2663 8.849 164.073 119.437 1.00 92.21 O
ATOM 13 C1' C B2663 9.841 163.857 121.618 1.00 90.89 C
ATOM 14 N1 C B2663 9.536 163.201 122.903 1.00 90.34 N
ATOM 15 C2 C B2663 9.117 161.858 122.893 1.00 90.46 C
ATOM 16 O2 C B2663 8.968 161.278 121.803 1.00 89.92 O
ATOM 17 N3 C B2663 8.883 161.231 124.068 1.00 90.51 N
ATOM 18 C4 C B2663 9.044 161.888 125.219 1.00 90.37 C
ATOM 19 N4 C B2663 8.824 161.220 126.354 1.00 90.04 N
ATOM 20 C5 C B2663 9.444 163.260 125.258 1.00 89.90 C
ATOM 21 C6 C B2663 9.676 163.870 124.089 1.00 89.58 C
ATOM 22 P C B2664 6.485 167.161 120.299 1.00 98.81 P
ATOM 23 OP1 C B2664 5.966 166.715 121.621 1.00 98.67 O
ATOM 24 OP2 C B2664 5.709 166.863 119.065 1.00 98.50 O
ATOM 25 O5' C B2664 6.710 168.733 120.376 1.00 98.74 O
TER
Atoms:
C2: (9.288,169.520,115.914)
OP1: (5.966,166.715,121.621)
OP2: (5.709,166.863,119.065)
C4: (9.017,167.301,115.238)
O5': (6.710,168.733,120.376)
C3': (8.005,171.429,119.927)
C1': (9.158,170.131,118.328)
O4': (9.317,169.472,119.571)
C5': (7.643,169.283,121.311)
P: (6.485,167.161,120.299)
O2: (9.488,170.724,115.661)
C4': (8.608,170.205,120.608)
C2': (7.900,170.984,118.471)
O2': (7.923,172.064,117.557)
N1: (9.091,169.117,117.255)
N3: (9.249,168.583,114.932)
N4: (8.987,166.412,114.238)
C6: (8.850,167.800,117.549)
C5: (8.804,166.870,116.583)
O3': (8.925,172.507,120.048)
OP1: (5.966,166.715,121.621)
OP2: (5.709,166.863,119.065)
C4: (9.017,167.301,115.238)
O5': (6.710,168.733,120.376)
C3': (8.005,171.429,119.927)
C1': (9.158,170.131,118.328)
O4': (9.317,169.472,119.571)
C5': (7.643,169.283,121.311)
P: (6.485,167.161,120.299)
O2: (9.488,170.724,115.661)
C4': (8.608,170.205,120.608)
C2': (7.900,170.984,118.471)
O2': (7.923,172.064,117.557)
N1: (9.091,169.117,117.255)
N3: (9.249,168.583,114.932)
N4: (8.987,166.412,114.238)
C6: (8.850,167.800,117.549)
C5: (8.804,166.870,116.583)
O3': (8.925,172.507,120.048)
C2: (9.117,161.858,122.893)
OP1: (9.519,169.554,124.030)
OP2: (9.355,167.744,125.837)
C4: (9.044,161.888,125.219)
O5': (9.891,167.136,123.491)
C3': (8.593,165.816,121.150)
C1': (9.841,163.857,121.618)
O4': (10.671,164.978,121.863)
C5': (10.394,167.353,122.160)
P: (9.991,168.270,124.605)
O2: (8.968,161.278,121.803)
C4': (10.071,166.164,121.283)
C2': (8.628,164.329,120.810)
O2': (8.849,164.073,119.437)
N1: (9.536,163.201,122.903)
N3: (8.883,161.231,124.068)
N4: (8.824,161.220,126.354)
C6: (9.676,163.870,124.089)
C5: (9.444,163.260,125.258)
O3': (7.975,166.576,120.105)
OP1: (9.519,169.554,124.030)
OP2: (9.355,167.744,125.837)
C4: (9.044,161.888,125.219)
O5': (9.891,167.136,123.491)
C3': (8.593,165.816,121.150)
C1': (9.841,163.857,121.618)
O4': (10.671,164.978,121.863)
C5': (10.394,167.353,122.160)
P: (9.991,168.270,124.605)
O2: (8.968,161.278,121.803)
C4': (10.071,166.164,121.283)
C2': (8.628,164.329,120.810)
O2': (8.849,164.073,119.437)
N1: (9.536,163.201,122.903)
N3: (8.883,161.231,124.068)
N4: (8.824,161.220,126.354)
C6: (9.676,163.870,124.089)
C5: (9.444,163.260,125.258)
O3': (7.975,166.576,120.105)
Image (generated by PyMOL):