Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0902:01002
Extra
PDB:
ATOM 1 O3' A A 901 51.470 92.371 88.602 1.00 33.94 O
ATOM 2 P C A 902 51.860 91.551 89.929 1.00 35.06 P
ATOM 3 OP1 C A 902 50.841 91.869 90.971 1.00 33.98 O
ATOM 4 OP2 C A 902 53.296 91.822 90.215 1.00 34.26 O
ATOM 5 O5' C A 902 51.720 90.026 89.473 1.00 30.43 O
ATOM 6 C5' C A 902 52.760 89.401 88.694 1.00 29.27 C
ATOM 7 C4' C A 902 52.288 88.095 88.106 1.00 28.40 C
ATOM 8 O4' C A 902 51.139 88.329 87.262 1.00 27.17 O
ATOM 9 C3' C A 902 53.285 87.441 87.166 1.00 28.79 C
ATOM 10 O3' C A 902 54.246 86.670 87.872 1.00 31.60 O
ATOM 11 C2' C A 902 52.406 86.553 86.306 1.00 29.02 C
ATOM 12 O2' C A 902 52.111 85.326 86.931 1.00 31.87 O
ATOM 13 C1' C A 902 51.135 87.394 86.196 1.00 27.89 C
ATOM 14 N1 C A 902 50.964 88.106 84.913 1.00 29.36 N
ATOM 15 C2 C A 902 50.832 87.358 83.740 1.00 31.37 C
ATOM 16 O2 C A 902 50.879 86.126 83.804 1.00 33.46 O
ATOM 17 N3 C A 902 50.654 87.997 82.564 1.00 33.03 N
ATOM 18 C4 C A 902 50.605 89.329 82.528 1.00 32.23 C
ATOM 19 N4 C A 902 50.417 89.912 81.343 1.00 31.94 N
ATOM 20 C5 C A 902 50.744 90.116 83.701 1.00 31.00 C
ATOM 21 C6 C A 902 50.923 89.471 84.860 1.00 31.35 C
ATOM 22 P A A 903 55.659 86.348 87.185 1.00 35.41 P
ATOM 23 OP1 A A 903 56.559 85.781 88.220 1.00 34.77 O
ATOM 24 OP2 A A 903 56.080 87.554 86.436 1.00 37.97 O
ATOM 25 O5' A A 903 55.320 85.216 86.122 1.00 34.86 O
TER
ATOM 1 O3' U B1001 48.987 96.675 82.541 1.00 28.56 O
ATOM 2 P C B1002 50.520 97.122 82.686 1.00 30.48 P
ATOM 3 OP1 C B1002 50.696 97.804 83.986 1.00 28.08 O
ATOM 4 OP2 C B1002 50.940 97.792 81.440 1.00 32.16 O
ATOM 5 O5' C B1002 51.300 95.746 82.733 1.00 30.47 O
ATOM 6 C5' C B1002 51.056 94.814 83.782 1.00 30.09 C
ATOM 7 C4' C B1002 52.091 93.736 83.745 1.00 30.40 C
ATOM 8 O4' C B1002 51.906 92.939 82.560 1.00 29.03 O
ATOM 9 C3' C B1002 53.508 94.244 83.587 1.00 30.60 C
ATOM 10 O3' C B1002 53.984 94.697 84.848 1.00 32.69 O
ATOM 11 C2' C B1002 54.227 92.998 83.078 1.00 30.67 C
ATOM 12 O2' C B1002 54.535 92.092 84.112 1.00 35.00 O
ATOM 13 C1' C B1002 53.141 92.349 82.216 1.00 29.99 C
ATOM 14 N1 C B1002 53.330 92.456 80.762 1.00 30.77 N
ATOM 15 C2 C B1002 54.148 91.522 80.129 1.00 30.73 C
ATOM 16 O2 C B1002 54.726 90.666 80.817 1.00 31.41 O
ATOM 17 N3 C B1002 54.296 91.579 78.784 1.00 30.16 N
ATOM 18 C4 C B1002 53.678 92.531 78.081 1.00 28.96 C
ATOM 19 N4 C B1002 53.848 92.537 76.758 1.00 28.86 N
ATOM 20 C5 C B1002 52.859 93.513 78.704 1.00 28.75 C
ATOM 21 C6 C B1002 52.711 93.440 80.033 1.00 30.63 C
ATOM 22 P C B1003 55.186 95.754 84.926 1.00 34.22 P
ATOM 23 OP1 C B1003 55.869 95.835 83.616 1.00 36.14 O
ATOM 24 OP2 C B1003 55.954 95.356 86.130 1.00 35.41 O
ATOM 25 O5' C B1003 54.504 97.172 85.203 1.00 35.01 O
TER
ATOM 2 P C A 902 51.860 91.551 89.929 1.00 35.06 P
ATOM 3 OP1 C A 902 50.841 91.869 90.971 1.00 33.98 O
ATOM 4 OP2 C A 902 53.296 91.822 90.215 1.00 34.26 O
ATOM 5 O5' C A 902 51.720 90.026 89.473 1.00 30.43 O
ATOM 6 C5' C A 902 52.760 89.401 88.694 1.00 29.27 C
ATOM 7 C4' C A 902 52.288 88.095 88.106 1.00 28.40 C
ATOM 8 O4' C A 902 51.139 88.329 87.262 1.00 27.17 O
ATOM 9 C3' C A 902 53.285 87.441 87.166 1.00 28.79 C
ATOM 10 O3' C A 902 54.246 86.670 87.872 1.00 31.60 O
ATOM 11 C2' C A 902 52.406 86.553 86.306 1.00 29.02 C
ATOM 12 O2' C A 902 52.111 85.326 86.931 1.00 31.87 O
ATOM 13 C1' C A 902 51.135 87.394 86.196 1.00 27.89 C
ATOM 14 N1 C A 902 50.964 88.106 84.913 1.00 29.36 N
ATOM 15 C2 C A 902 50.832 87.358 83.740 1.00 31.37 C
ATOM 16 O2 C A 902 50.879 86.126 83.804 1.00 33.46 O
ATOM 17 N3 C A 902 50.654 87.997 82.564 1.00 33.03 N
ATOM 18 C4 C A 902 50.605 89.329 82.528 1.00 32.23 C
ATOM 19 N4 C A 902 50.417 89.912 81.343 1.00 31.94 N
ATOM 20 C5 C A 902 50.744 90.116 83.701 1.00 31.00 C
ATOM 21 C6 C A 902 50.923 89.471 84.860 1.00 31.35 C
ATOM 22 P A A 903 55.659 86.348 87.185 1.00 35.41 P
ATOM 23 OP1 A A 903 56.559 85.781 88.220 1.00 34.77 O
ATOM 24 OP2 A A 903 56.080 87.554 86.436 1.00 37.97 O
ATOM 25 O5' A A 903 55.320 85.216 86.122 1.00 34.86 O
TER
ATOM 1 O3' U B1001 48.987 96.675 82.541 1.00 28.56 O
ATOM 2 P C B1002 50.520 97.122 82.686 1.00 30.48 P
ATOM 3 OP1 C B1002 50.696 97.804 83.986 1.00 28.08 O
ATOM 4 OP2 C B1002 50.940 97.792 81.440 1.00 32.16 O
ATOM 5 O5' C B1002 51.300 95.746 82.733 1.00 30.47 O
ATOM 6 C5' C B1002 51.056 94.814 83.782 1.00 30.09 C
ATOM 7 C4' C B1002 52.091 93.736 83.745 1.00 30.40 C
ATOM 8 O4' C B1002 51.906 92.939 82.560 1.00 29.03 O
ATOM 9 C3' C B1002 53.508 94.244 83.587 1.00 30.60 C
ATOM 10 O3' C B1002 53.984 94.697 84.848 1.00 32.69 O
ATOM 11 C2' C B1002 54.227 92.998 83.078 1.00 30.67 C
ATOM 12 O2' C B1002 54.535 92.092 84.112 1.00 35.00 O
ATOM 13 C1' C B1002 53.141 92.349 82.216 1.00 29.99 C
ATOM 14 N1 C B1002 53.330 92.456 80.762 1.00 30.77 N
ATOM 15 C2 C B1002 54.148 91.522 80.129 1.00 30.73 C
ATOM 16 O2 C B1002 54.726 90.666 80.817 1.00 31.41 O
ATOM 17 N3 C B1002 54.296 91.579 78.784 1.00 30.16 N
ATOM 18 C4 C B1002 53.678 92.531 78.081 1.00 28.96 C
ATOM 19 N4 C B1002 53.848 92.537 76.758 1.00 28.86 N
ATOM 20 C5 C B1002 52.859 93.513 78.704 1.00 28.75 C
ATOM 21 C6 C B1002 52.711 93.440 80.033 1.00 30.63 C
ATOM 22 P C B1003 55.186 95.754 84.926 1.00 34.22 P
ATOM 23 OP1 C B1003 55.869 95.835 83.616 1.00 36.14 O
ATOM 24 OP2 C B1003 55.954 95.356 86.130 1.00 35.41 O
ATOM 25 O5' C B1003 54.504 97.172 85.203 1.00 35.01 O
TER
Atoms:
C2: (50.832,87.358,83.740)
OP1: (50.841,91.869,90.971)
OP2: (53.296,91.822,90.215)
C4: (50.605,89.329,82.528)
O5': (51.720,90.026,89.473)
C3': (53.285,87.441,87.166)
C1': (51.135,87.394,86.196)
O4': (51.139,88.329,87.262)
C5': (52.760,89.401,88.694)
P: (51.860,91.551,89.929)
O2: (50.879,86.126,83.804)
C4': (52.288,88.095,88.106)
C2': (52.406,86.553,86.306)
O2': (52.111,85.326,86.931)
N1: (50.964,88.106,84.913)
N3: (50.654,87.997,82.564)
N4: (50.417,89.912,81.343)
C6: (50.923,89.471,84.860)
C5: (50.744,90.116,83.701)
O3': (54.246,86.670,87.872)
OP1: (50.841,91.869,90.971)
OP2: (53.296,91.822,90.215)
C4: (50.605,89.329,82.528)
O5': (51.720,90.026,89.473)
C3': (53.285,87.441,87.166)
C1': (51.135,87.394,86.196)
O4': (51.139,88.329,87.262)
C5': (52.760,89.401,88.694)
P: (51.860,91.551,89.929)
O2: (50.879,86.126,83.804)
C4': (52.288,88.095,88.106)
C2': (52.406,86.553,86.306)
O2': (52.111,85.326,86.931)
N1: (50.964,88.106,84.913)
N3: (50.654,87.997,82.564)
N4: (50.417,89.912,81.343)
C6: (50.923,89.471,84.860)
C5: (50.744,90.116,83.701)
O3': (54.246,86.670,87.872)
C2: (54.148,91.522,80.129)
OP1: (50.696,97.804,83.986)
OP2: (50.940,97.792,81.440)
C4: (53.678,92.531,78.081)
O5': (51.300,95.746,82.733)
C3': (53.508,94.244,83.587)
C1': (53.141,92.349,82.216)
O4': (51.906,92.939,82.560)
C5': (51.056,94.814,83.782)
P: (50.520,97.122,82.686)
O2: (54.726,90.666,80.817)
C4': (52.091,93.736,83.745)
C2': (54.227,92.998,83.078)
O2': (54.535,92.092,84.112)
N1: (53.330,92.456,80.762)
N3: (54.296,91.579,78.784)
N4: (53.848,92.537,76.758)
C6: (52.711,93.440,80.033)
C5: (52.859,93.513,78.704)
O3': (53.984,94.697,84.848)
OP1: (50.696,97.804,83.986)
OP2: (50.940,97.792,81.440)
C4: (53.678,92.531,78.081)
O5': (51.300,95.746,82.733)
C3': (53.508,94.244,83.587)
C1': (53.141,92.349,82.216)
O4': (51.906,92.939,82.560)
C5': (51.056,94.814,83.782)
P: (50.520,97.122,82.686)
O2: (54.726,90.666,80.817)
C4': (52.091,93.736,83.745)
C2': (54.227,92.998,83.078)
O2': (54.535,92.092,84.112)
N1: (53.330,92.456,80.762)
N3: (54.296,91.579,78.784)
N4: (53.848,92.537,76.758)
C6: (52.711,93.440,80.033)
C5: (52.859,93.513,78.704)
O3': (53.984,94.697,84.848)
Image (generated by PyMOL):