Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A486:A20
Extra
PDB:
ATOM 1 O3' C A 485 -40.379 66.410 74.894 1.00 39.18 O
ATOM 2 P C A 486 -39.876 64.875 74.818 1.00 14.30 P
ATOM 3 OP1 C A 486 -38.878 64.654 75.891 1.00 61.16 O
ATOM 4 OP2 C A 486 -39.499 64.604 73.413 1.00 59.89 O
ATOM 5 O5' C A 486 -41.179 64.031 75.189 1.00 14.93 O
ATOM 6 C5' C A 486 -41.420 62.738 74.600 1.00 14.75 C
ATOM 7 C4' C A 486 -42.631 62.095 75.226 1.00 16.07 C
ATOM 8 O4' C A 486 -42.328 61.793 76.608 1.00 16.00 O
ATOM 9 C3' C A 486 -43.902 62.940 75.224 1.00 16.99 C
ATOM 10 O3' C A 486 -45.056 62.126 75.054 1.00 17.96 O
ATOM 11 C2' C A 486 -43.956 63.490 76.643 1.00 16.85 C
ATOM 12 O2' C A 486 -45.283 63.690 77.090 1.00 17.25 O
ATOM 13 C1' C A 486 -43.313 62.360 77.440 1.00 16.51 C
ATOM 14 N1 C A 486 -42.683 62.808 78.695 1.00 43.22 N
ATOM 15 C2 C A 486 -43.264 62.426 79.906 1.00 44.91 C
ATOM 16 O2 C A 486 -44.268 61.702 79.888 1.00 46.02 O
ATOM 17 N3 C A 486 -42.721 62.850 81.063 1.00 45.11 N
ATOM 18 C4 C A 486 -41.635 63.618 81.047 1.00 45.61 C
ATOM 19 N4 C A 486 -41.138 64.010 82.222 1.00 45.00 N
ATOM 20 C5 C A 486 -41.011 64.016 79.831 1.00 45.50 C
ATOM 21 C6 C A 486 -41.562 63.591 78.687 1.00 44.77 C
ATOM 22 P A A 487 -45.449 61.569 73.596 1.00 36.64 P
ATOM 23 OP1 A A 487 -44.561 62.196 72.575 1.00 17.07 O
ATOM 24 OP2 A A 487 -46.936 61.670 73.452 1.00 16.76 O
ATOM 25 O5' A A 487 -45.032 60.034 73.716 1.00 42.80 O
TER
ATOM 1 O3' U B 19 -35.385 69.703 86.513 1.00 22.47 O
ATOM 2 P C B 20 -34.487 68.372 86.452 1.00 33.40 P
ATOM 3 OP1 C B 20 -34.658 67.705 87.775 1.00 25.71 O
ATOM 4 OP2 C B 20 -33.119 68.696 85.958 1.00 26.91 O
ATOM 5 O5' C B 20 -35.179 67.510 85.307 1.00 19.19 O
ATOM 6 C5' C B 20 -36.601 67.348 85.282 1.00 19.77 C
ATOM 7 C4' C B 20 -37.046 66.891 83.920 1.00 21.16 C
ATOM 8 O4' C B 20 -36.898 67.951 82.951 1.00 22.11 O
ATOM 9 C3' C B 20 -36.249 65.743 83.338 1.00 22.22 C
ATOM 10 O3' C B 20 -36.694 64.506 83.861 1.00 24.17 O
ATOM 11 C2' C B 20 -36.508 65.883 81.845 1.00 23.34 C
ATOM 12 O2' C B 20 -37.745 65.327 81.430 1.00 24.57 O
ATOM 13 C1' C B 20 -36.574 67.398 81.693 1.00 21.98 C
ATOM 14 N1 C B 20 -35.290 67.947 81.253 1.00 12.22 N
ATOM 15 C2 C B 20 -35.038 68.040 79.873 1.00 13.53 C
ATOM 16 O2 C B 20 -35.927 67.696 79.076 1.00 14.38 O
ATOM 17 N3 C B 20 -33.843 68.509 79.446 1.00 13.82 N
ATOM 18 C4 C B 20 -32.928 68.897 80.333 1.00 12.61 C
ATOM 19 N4 C B 20 -31.767 69.352 79.867 1.00 12.29 N
ATOM 20 C5 C B 20 -33.165 68.834 81.745 1.00 12.68 C
ATOM 21 C6 C B 20 -34.346 68.353 82.156 1.00 12.20 C
ATOM 22 P A B 21 -35.676 63.282 83.941 1.00 19.35 P
ATOM 23 OP1 A B 21 -36.396 62.236 84.695 1.00 29.85 O
ATOM 24 OP2 A B 21 -34.353 63.760 84.420 1.00 28.54 O
ATOM 25 O5' A B 21 -35.540 62.832 82.422 1.00 34.26 O
TER
ATOM 2 P C A 486 -39.876 64.875 74.818 1.00 14.30 P
ATOM 3 OP1 C A 486 -38.878 64.654 75.891 1.00 61.16 O
ATOM 4 OP2 C A 486 -39.499 64.604 73.413 1.00 59.89 O
ATOM 5 O5' C A 486 -41.179 64.031 75.189 1.00 14.93 O
ATOM 6 C5' C A 486 -41.420 62.738 74.600 1.00 14.75 C
ATOM 7 C4' C A 486 -42.631 62.095 75.226 1.00 16.07 C
ATOM 8 O4' C A 486 -42.328 61.793 76.608 1.00 16.00 O
ATOM 9 C3' C A 486 -43.902 62.940 75.224 1.00 16.99 C
ATOM 10 O3' C A 486 -45.056 62.126 75.054 1.00 17.96 O
ATOM 11 C2' C A 486 -43.956 63.490 76.643 1.00 16.85 C
ATOM 12 O2' C A 486 -45.283 63.690 77.090 1.00 17.25 O
ATOM 13 C1' C A 486 -43.313 62.360 77.440 1.00 16.51 C
ATOM 14 N1 C A 486 -42.683 62.808 78.695 1.00 43.22 N
ATOM 15 C2 C A 486 -43.264 62.426 79.906 1.00 44.91 C
ATOM 16 O2 C A 486 -44.268 61.702 79.888 1.00 46.02 O
ATOM 17 N3 C A 486 -42.721 62.850 81.063 1.00 45.11 N
ATOM 18 C4 C A 486 -41.635 63.618 81.047 1.00 45.61 C
ATOM 19 N4 C A 486 -41.138 64.010 82.222 1.00 45.00 N
ATOM 20 C5 C A 486 -41.011 64.016 79.831 1.00 45.50 C
ATOM 21 C6 C A 486 -41.562 63.591 78.687 1.00 44.77 C
ATOM 22 P A A 487 -45.449 61.569 73.596 1.00 36.64 P
ATOM 23 OP1 A A 487 -44.561 62.196 72.575 1.00 17.07 O
ATOM 24 OP2 A A 487 -46.936 61.670 73.452 1.00 16.76 O
ATOM 25 O5' A A 487 -45.032 60.034 73.716 1.00 42.80 O
TER
ATOM 1 O3' U B 19 -35.385 69.703 86.513 1.00 22.47 O
ATOM 2 P C B 20 -34.487 68.372 86.452 1.00 33.40 P
ATOM 3 OP1 C B 20 -34.658 67.705 87.775 1.00 25.71 O
ATOM 4 OP2 C B 20 -33.119 68.696 85.958 1.00 26.91 O
ATOM 5 O5' C B 20 -35.179 67.510 85.307 1.00 19.19 O
ATOM 6 C5' C B 20 -36.601 67.348 85.282 1.00 19.77 C
ATOM 7 C4' C B 20 -37.046 66.891 83.920 1.00 21.16 C
ATOM 8 O4' C B 20 -36.898 67.951 82.951 1.00 22.11 O
ATOM 9 C3' C B 20 -36.249 65.743 83.338 1.00 22.22 C
ATOM 10 O3' C B 20 -36.694 64.506 83.861 1.00 24.17 O
ATOM 11 C2' C B 20 -36.508 65.883 81.845 1.00 23.34 C
ATOM 12 O2' C B 20 -37.745 65.327 81.430 1.00 24.57 O
ATOM 13 C1' C B 20 -36.574 67.398 81.693 1.00 21.98 C
ATOM 14 N1 C B 20 -35.290 67.947 81.253 1.00 12.22 N
ATOM 15 C2 C B 20 -35.038 68.040 79.873 1.00 13.53 C
ATOM 16 O2 C B 20 -35.927 67.696 79.076 1.00 14.38 O
ATOM 17 N3 C B 20 -33.843 68.509 79.446 1.00 13.82 N
ATOM 18 C4 C B 20 -32.928 68.897 80.333 1.00 12.61 C
ATOM 19 N4 C B 20 -31.767 69.352 79.867 1.00 12.29 N
ATOM 20 C5 C B 20 -33.165 68.834 81.745 1.00 12.68 C
ATOM 21 C6 C B 20 -34.346 68.353 82.156 1.00 12.20 C
ATOM 22 P A B 21 -35.676 63.282 83.941 1.00 19.35 P
ATOM 23 OP1 A B 21 -36.396 62.236 84.695 1.00 29.85 O
ATOM 24 OP2 A B 21 -34.353 63.760 84.420 1.00 28.54 O
ATOM 25 O5' A B 21 -35.540 62.832 82.422 1.00 34.26 O
TER
Atoms:
C2: (-43.264,62.426,79.906)
OP1: (-38.878,64.654,75.891)
OP2: (-39.499,64.604,73.413)
C4: (-41.635,63.618,81.047)
O5': (-41.179,64.031,75.189)
C3': (-43.902,62.940,75.224)
C1': (-43.313,62.360,77.440)
O4': (-42.328,61.793,76.608)
C5': (-41.420,62.738,74.600)
P: (-39.876,64.875,74.818)
O2: (-44.268,61.702,79.888)
C4': (-42.631,62.095,75.226)
C2': (-43.956,63.490,76.643)
O2': (-45.283,63.690,77.090)
N1: (-42.683,62.808,78.695)
N3: (-42.721,62.850,81.063)
N4: (-41.138,64.010,82.222)
C6: (-41.562,63.591,78.687)
C5: (-41.011,64.016,79.831)
O3': (-45.056,62.126,75.054)
OP1: (-38.878,64.654,75.891)
OP2: (-39.499,64.604,73.413)
C4: (-41.635,63.618,81.047)
O5': (-41.179,64.031,75.189)
C3': (-43.902,62.940,75.224)
C1': (-43.313,62.360,77.440)
O4': (-42.328,61.793,76.608)
C5': (-41.420,62.738,74.600)
P: (-39.876,64.875,74.818)
O2: (-44.268,61.702,79.888)
C4': (-42.631,62.095,75.226)
C2': (-43.956,63.490,76.643)
O2': (-45.283,63.690,77.090)
N1: (-42.683,62.808,78.695)
N3: (-42.721,62.850,81.063)
N4: (-41.138,64.010,82.222)
C6: (-41.562,63.591,78.687)
C5: (-41.011,64.016,79.831)
O3': (-45.056,62.126,75.054)
C2: (-35.038,68.040,79.873)
OP1: (-34.658,67.705,87.775)
OP2: (-33.119,68.696,85.958)
C4: (-32.928,68.897,80.333)
O5': (-35.179,67.510,85.307)
C3': (-36.249,65.743,83.338)
C1': (-36.574,67.398,81.693)
O4': (-36.898,67.951,82.951)
C5': (-36.601,67.348,85.282)
P: (-34.487,68.372,86.452)
O2: (-35.927,67.696,79.076)
C4': (-37.046,66.891,83.920)
C2': (-36.508,65.883,81.845)
O2': (-37.745,65.327,81.430)
N1: (-35.290,67.947,81.253)
N3: (-33.843,68.509,79.446)
N4: (-31.767,69.352,79.867)
C6: (-34.346,68.353,82.156)
C5: (-33.165,68.834,81.745)
O3': (-36.694,64.506,83.861)
OP1: (-34.658,67.705,87.775)
OP2: (-33.119,68.696,85.958)
C4: (-32.928,68.897,80.333)
O5': (-35.179,67.510,85.307)
C3': (-36.249,65.743,83.338)
C1': (-36.574,67.398,81.693)
O4': (-36.898,67.951,82.951)
C5': (-36.601,67.348,85.282)
P: (-34.487,68.372,86.452)
O2: (-35.927,67.696,79.076)
C4': (-37.046,66.891,83.920)
C2': (-36.508,65.883,81.845)
O2': (-37.745,65.327,81.430)
N1: (-35.290,67.947,81.253)
N3: (-33.843,68.509,79.446)
N4: (-31.767,69.352,79.867)
C6: (-34.346,68.353,82.156)
C5: (-33.165,68.834,81.745)
O3': (-36.694,64.506,83.861)
Image (generated by PyMOL):