Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B11:B39
Extra
PDB:
ATOM 1 O3' A A 10 -25.348 -2.259 17.093 1.00 27.43 O
ATOM 2 P C A 11 -24.899 -3.755 16.735 1.00 27.32 P
ATOM 3 OP1 C A 11 -24.397 -4.402 17.973 1.00 26.66 O
ATOM 4 OP2 C A 11 -24.000 -3.621 15.562 1.00 26.88 O
ATOM 5 O5' C A 11 -26.290 -4.392 16.300 1.00 29.16 O
ATOM 6 C5' C A 11 -26.936 -5.378 17.102 1.00 29.76 C
ATOM 7 C4' C A 11 -28.382 -5.492 16.701 1.00 30.56 C
ATOM 8 O4' C A 11 -29.035 -4.210 16.884 1.00 29.79 O
ATOM 9 C3' C A 11 -28.633 -5.830 15.242 1.00 31.73 C
ATOM 10 O3' C A 11 -28.513 -7.206 14.950 1.00 32.57 O
ATOM 11 C2' C A 11 -30.033 -5.271 15.012 1.00 31.98 C
ATOM 12 O2' C A 11 -30.996 -6.147 15.580 1.00 31.90 O
ATOM 13 C1' C A 11 -29.987 -4.003 15.862 1.00 30.89 C
ATOM 14 N1 C A 11 -29.570 -2.833 15.059 1.00 30.75 N
ATOM 15 C2 C A 11 -30.503 -2.240 14.205 1.00 31.06 C
ATOM 16 O2 C A 11 -31.647 -2.714 14.150 1.00 31.70 O
ATOM 17 N3 C A 11 -30.136 -1.172 13.463 1.00 30.33 N
ATOM 18 C4 C A 11 -28.896 -0.695 13.555 1.00 30.24 C
ATOM 19 N4 C A 11 -28.577 0.362 12.806 1.00 30.49 N
ATOM 20 C5 C A 11 -27.924 -1.279 14.417 1.00 29.50 C
ATOM 21 C6 C A 11 -28.300 -2.337 15.145 1.00 29.42 C
ATOM 22 P C A 12 -28.092 -7.643 13.464 1.00 34.81 P
ATOM 23 OP1 C A 12 -27.932 -9.119 13.485 1.00 35.53 O
ATOM 24 OP2 C A 12 -26.935 -6.794 13.082 1.00 32.81 O
ATOM 25 O5' C A 12 -29.373 -7.235 12.613 1.00 35.41 O
TER
ATOM 1 O3' A B 38 -21.642 6.813 15.472 1.00 27.71 O
ATOM 2 P C B 39 -21.381 6.260 13.986 1.00 28.72 P
ATOM 3 OP1 C B 39 -19.914 6.064 13.882 1.00 29.08 O
ATOM 4 OP2 C B 39 -22.054 7.193 13.048 1.00 27.66 O
ATOM 5 O5' C B 39 -22.140 4.859 14.003 1.00 27.32 O
ATOM 6 C5' C B 39 -21.615 3.750 14.731 1.00 26.92 C
ATOM 7 C4' C B 39 -22.650 2.666 14.874 1.00 26.83 C
ATOM 8 O4' C B 39 -23.816 3.219 15.536 1.00 27.54 O
ATOM 9 C3' C B 39 -23.207 2.060 13.592 1.00 26.89 C
ATOM 10 O3' C B 39 -22.386 1.063 13.012 1.00 27.12 O
ATOM 11 C2' C B 39 -24.562 1.532 14.053 1.00 27.62 C
ATOM 12 O2' C B 39 -24.383 0.333 14.793 1.00 27.67 O
ATOM 13 C1' C B 39 -24.992 2.614 15.039 1.00 27.65 C
ATOM 14 N1 C B 39 -25.848 3.628 14.383 1.00 27.47 N
ATOM 15 C2 C B 39 -27.233 3.441 14.392 1.00 28.00 C
ATOM 16 O2 C B 39 -27.704 2.439 14.951 1.00 27.99 O
ATOM 17 N3 C B 39 -28.027 4.357 13.790 1.00 28.22 N
ATOM 18 C4 C B 39 -27.486 5.421 13.198 1.00 27.53 C
ATOM 19 N4 C B 39 -28.310 6.298 12.621 1.00 28.34 N
ATOM 20 C5 C B 39 -26.079 5.637 13.174 1.00 27.31 C
ATOM 21 C6 C B 39 -25.305 4.724 13.771 1.00 27.44 C
ATOM 22 P C B 40 -21.260 1.451 11.931 1.00 28.77 P
ATOM 23 OP1 C B 40 -21.688 2.695 11.242 1.00 26.69 O
ATOM 24 OP2 C B 40 -21.012 0.229 11.126 1.00 26.71 O
ATOM 25 O5' C B 40 -20.027 1.752 12.889 1.00 27.32 O
TER
ATOM 2 P C A 11 -24.899 -3.755 16.735 1.00 27.32 P
ATOM 3 OP1 C A 11 -24.397 -4.402 17.973 1.00 26.66 O
ATOM 4 OP2 C A 11 -24.000 -3.621 15.562 1.00 26.88 O
ATOM 5 O5' C A 11 -26.290 -4.392 16.300 1.00 29.16 O
ATOM 6 C5' C A 11 -26.936 -5.378 17.102 1.00 29.76 C
ATOM 7 C4' C A 11 -28.382 -5.492 16.701 1.00 30.56 C
ATOM 8 O4' C A 11 -29.035 -4.210 16.884 1.00 29.79 O
ATOM 9 C3' C A 11 -28.633 -5.830 15.242 1.00 31.73 C
ATOM 10 O3' C A 11 -28.513 -7.206 14.950 1.00 32.57 O
ATOM 11 C2' C A 11 -30.033 -5.271 15.012 1.00 31.98 C
ATOM 12 O2' C A 11 -30.996 -6.147 15.580 1.00 31.90 O
ATOM 13 C1' C A 11 -29.987 -4.003 15.862 1.00 30.89 C
ATOM 14 N1 C A 11 -29.570 -2.833 15.059 1.00 30.75 N
ATOM 15 C2 C A 11 -30.503 -2.240 14.205 1.00 31.06 C
ATOM 16 O2 C A 11 -31.647 -2.714 14.150 1.00 31.70 O
ATOM 17 N3 C A 11 -30.136 -1.172 13.463 1.00 30.33 N
ATOM 18 C4 C A 11 -28.896 -0.695 13.555 1.00 30.24 C
ATOM 19 N4 C A 11 -28.577 0.362 12.806 1.00 30.49 N
ATOM 20 C5 C A 11 -27.924 -1.279 14.417 1.00 29.50 C
ATOM 21 C6 C A 11 -28.300 -2.337 15.145 1.00 29.42 C
ATOM 22 P C A 12 -28.092 -7.643 13.464 1.00 34.81 P
ATOM 23 OP1 C A 12 -27.932 -9.119 13.485 1.00 35.53 O
ATOM 24 OP2 C A 12 -26.935 -6.794 13.082 1.00 32.81 O
ATOM 25 O5' C A 12 -29.373 -7.235 12.613 1.00 35.41 O
TER
ATOM 1 O3' A B 38 -21.642 6.813 15.472 1.00 27.71 O
ATOM 2 P C B 39 -21.381 6.260 13.986 1.00 28.72 P
ATOM 3 OP1 C B 39 -19.914 6.064 13.882 1.00 29.08 O
ATOM 4 OP2 C B 39 -22.054 7.193 13.048 1.00 27.66 O
ATOM 5 O5' C B 39 -22.140 4.859 14.003 1.00 27.32 O
ATOM 6 C5' C B 39 -21.615 3.750 14.731 1.00 26.92 C
ATOM 7 C4' C B 39 -22.650 2.666 14.874 1.00 26.83 C
ATOM 8 O4' C B 39 -23.816 3.219 15.536 1.00 27.54 O
ATOM 9 C3' C B 39 -23.207 2.060 13.592 1.00 26.89 C
ATOM 10 O3' C B 39 -22.386 1.063 13.012 1.00 27.12 O
ATOM 11 C2' C B 39 -24.562 1.532 14.053 1.00 27.62 C
ATOM 12 O2' C B 39 -24.383 0.333 14.793 1.00 27.67 O
ATOM 13 C1' C B 39 -24.992 2.614 15.039 1.00 27.65 C
ATOM 14 N1 C B 39 -25.848 3.628 14.383 1.00 27.47 N
ATOM 15 C2 C B 39 -27.233 3.441 14.392 1.00 28.00 C
ATOM 16 O2 C B 39 -27.704 2.439 14.951 1.00 27.99 O
ATOM 17 N3 C B 39 -28.027 4.357 13.790 1.00 28.22 N
ATOM 18 C4 C B 39 -27.486 5.421 13.198 1.00 27.53 C
ATOM 19 N4 C B 39 -28.310 6.298 12.621 1.00 28.34 N
ATOM 20 C5 C B 39 -26.079 5.637 13.174 1.00 27.31 C
ATOM 21 C6 C B 39 -25.305 4.724 13.771 1.00 27.44 C
ATOM 22 P C B 40 -21.260 1.451 11.931 1.00 28.77 P
ATOM 23 OP1 C B 40 -21.688 2.695 11.242 1.00 26.69 O
ATOM 24 OP2 C B 40 -21.012 0.229 11.126 1.00 26.71 O
ATOM 25 O5' C B 40 -20.027 1.752 12.889 1.00 27.32 O
TER
Atoms:
C2: (-30.503,-2.240,14.205)
OP1: (-24.397,-4.402,17.973)
OP2: (-24.000,-3.621,15.562)
C4: (-28.896,-0.695,13.555)
O5': (-26.290,-4.392,16.300)
C3': (-28.633,-5.830,15.242)
C1': (-29.987,-4.003,15.862)
O4': (-29.035,-4.210,16.884)
C5': (-26.936,-5.378,17.102)
P: (-24.899,-3.755,16.735)
O2: (-31.647,-2.714,14.150)
C4': (-28.382,-5.492,16.701)
C2': (-30.033,-5.271,15.012)
O2': (-30.996,-6.147,15.580)
N1: (-29.570,-2.833,15.059)
N3: (-30.136,-1.172,13.463)
N4: (-28.577,0.362,12.806)
C6: (-28.300,-2.337,15.145)
C5: (-27.924,-1.279,14.417)
O3': (-28.513,-7.206,14.950)
OP1: (-24.397,-4.402,17.973)
OP2: (-24.000,-3.621,15.562)
C4: (-28.896,-0.695,13.555)
O5': (-26.290,-4.392,16.300)
C3': (-28.633,-5.830,15.242)
C1': (-29.987,-4.003,15.862)
O4': (-29.035,-4.210,16.884)
C5': (-26.936,-5.378,17.102)
P: (-24.899,-3.755,16.735)
O2: (-31.647,-2.714,14.150)
C4': (-28.382,-5.492,16.701)
C2': (-30.033,-5.271,15.012)
O2': (-30.996,-6.147,15.580)
N1: (-29.570,-2.833,15.059)
N3: (-30.136,-1.172,13.463)
N4: (-28.577,0.362,12.806)
C6: (-28.300,-2.337,15.145)
C5: (-27.924,-1.279,14.417)
O3': (-28.513,-7.206,14.950)
C2: (-27.233,3.441,14.392)
OP1: (-19.914,6.064,13.882)
OP2: (-22.054,7.193,13.048)
C4: (-27.486,5.421,13.198)
O5': (-22.140,4.859,14.003)
C3': (-23.207,2.060,13.592)
C1': (-24.992,2.614,15.039)
O4': (-23.816,3.219,15.536)
C5': (-21.615,3.750,14.731)
P: (-21.381,6.260,13.986)
O2: (-27.704,2.439,14.951)
C4': (-22.650,2.666,14.874)
C2': (-24.562,1.532,14.053)
O2': (-24.383,0.333,14.793)
N1: (-25.848,3.628,14.383)
N3: (-28.027,4.357,13.790)
N4: (-28.310,6.298,12.621)
C6: (-25.305,4.724,13.771)
C5: (-26.079,5.637,13.174)
O3': (-22.386,1.063,13.012)
OP1: (-19.914,6.064,13.882)
OP2: (-22.054,7.193,13.048)
C4: (-27.486,5.421,13.198)
O5': (-22.140,4.859,14.003)
C3': (-23.207,2.060,13.592)
C1': (-24.992,2.614,15.039)
O4': (-23.816,3.219,15.536)
C5': (-21.615,3.750,14.731)
P: (-21.381,6.260,13.986)
O2: (-27.704,2.439,14.951)
C4': (-22.650,2.666,14.874)
C2': (-24.562,1.532,14.053)
O2': (-24.383,0.333,14.793)
N1: (-25.848,3.628,14.383)
N3: (-28.027,4.357,13.790)
N4: (-28.310,6.298,12.621)
C6: (-25.305,4.724,13.771)
C5: (-26.079,5.637,13.174)
O3': (-22.386,1.063,13.012)
Image (generated by PyMOL):