Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2420:A2251
Extra
PDB:
ATOM 1 O3' A A2419 -102.386 -49.103 28.779 1.00 0.01 O
ATOM 2 P C A2420 -103.308 -50.211 29.443 1.00 0.01 P
ATOM 3 OP1 C A2420 -102.407 -51.051 30.274 1.00 0.01 O
ATOM 4 OP2 C A2420 -104.074 -50.848 28.357 1.00 0.01 O
ATOM 5 O5' C A2420 -104.281 -49.393 30.374 1.00 0.01 O
ATOM 6 C5' C A2420 -104.262 -49.607 31.775 1.00 0.01 C
ATOM 7 C4' C A2420 -105.494 -49.092 32.447 1.00 0.01 C
ATOM 8 O4' C A2420 -105.794 -47.791 31.948 1.00 0.01 O
ATOM 9 C3' C A2420 -106.772 -49.869 32.229 1.00 0.01 C
ATOM 10 O3' C A2420 -106.872 -50.999 33.076 1.00 0.01 O
ATOM 11 C2' C A2420 -107.828 -48.826 32.541 1.00 0.01 C
ATOM 12 O2' C A2420 -108.019 -48.738 33.941 1.00 0.01 O
ATOM 13 C1' C A2420 -107.158 -47.542 32.087 1.00 0.01 C
ATOM 14 N1 C A2420 -107.683 -47.006 30.822 1.00 0.01 N
ATOM 15 C2 C A2420 -108.795 -46.207 30.900 1.00 0.01 C
ATOM 16 O2 C A2420 -109.291 -46.101 32.003 1.00 0.01 O
ATOM 17 N3 C A2420 -109.313 -45.614 29.811 1.00 0.01 N
ATOM 18 C4 C A2420 -108.719 -45.785 28.630 1.00 0.01 C
ATOM 19 N4 C A2420 -109.223 -45.191 27.539 1.00 0.01 N
ATOM 20 C5 C A2420 -107.545 -46.580 28.520 1.00 0.01 C
ATOM 21 C6 C A2420 -107.059 -47.147 29.628 1.00 0.01 C
ATOM 22 P G A2421 -106.212 -52.400 32.668 1.00 0.01 P
ATOM 23 OP1 G A2421 -105.091 -52.111 31.775 1.00 0.01 O
ATOM 24 OP2 G A2421 -107.302 -53.275 32.178 1.00 0.01 O
ATOM 25 O5' G A2421 -105.669 -52.940 34.048 1.00 0.01 O
TER
ATOM 1 O3' U B2250 -107.903 -47.136 20.550 1.00 0.01 O
ATOM 2 P C B2251 -108.191 -46.887 22.075 1.00 0.01 P
ATOM 3 OP1 C B2251 -109.598 -47.311 22.322 1.00 0.01 O
ATOM 4 OP2 C B2251 -107.794 -45.483 22.380 1.00 0.01 O
ATOM 5 O5' C B2251 -107.179 -47.890 22.770 1.00 0.01 O
ATOM 6 C5' C B2251 -107.526 -49.244 22.967 1.00 0.01 C
ATOM 7 C4' C B2251 -106.609 -49.900 23.939 1.00 0.01 C
ATOM 8 O4' C B2251 -105.250 -49.556 23.605 1.00 0.01 O
ATOM 9 C3' C B2251 -106.805 -49.462 25.365 1.00 0.01 C
ATOM 10 O3' C B2251 -106.468 -50.528 26.224 1.00 0.01 O
ATOM 11 C2' C B2251 -105.790 -48.349 25.512 1.00 0.01 C
ATOM 12 O2' C B2251 -105.415 -48.065 26.852 1.00 0.01 O
ATOM 13 C1' C B2251 -104.643 -48.922 24.703 1.00 0.01 C
ATOM 14 N1 C B2251 -103.695 -47.918 24.194 1.00 0.01 N
ATOM 15 C2 C B2251 -102.355 -48.069 24.483 1.00 0.01 C
ATOM 16 O2 C B2251 -101.986 -49.049 25.163 1.00 0.01 O
ATOM 17 N3 C B2251 -101.511 -47.140 24.023 1.00 0.01 N
ATOM 18 C4 C B2251 -101.965 -46.152 23.300 1.00 0.01 C
ATOM 19 N4 C B2251 -101.105 -45.272 22.844 1.00 0.01 N
ATOM 20 C5 C B2251 -103.304 -45.986 22.984 1.00 0.01 C
ATOM 21 C6 C B2251 -104.131 -46.884 23.457 1.00 0.01 C
ATOM 22 P U B2252 -107.351 -51.839 26.226 1.00 0.01 P
ATOM 23 OP1 U B2252 -106.475 -52.923 26.649 1.00 0.01 O
ATOM 24 OP2 U B2252 -108.001 -51.922 24.917 1.00 0.01 O
ATOM 25 O5' U B2252 -108.443 -51.542 27.343 1.00 0.01 O
TER
ATOM 2 P C A2420 -103.308 -50.211 29.443 1.00 0.01 P
ATOM 3 OP1 C A2420 -102.407 -51.051 30.274 1.00 0.01 O
ATOM 4 OP2 C A2420 -104.074 -50.848 28.357 1.00 0.01 O
ATOM 5 O5' C A2420 -104.281 -49.393 30.374 1.00 0.01 O
ATOM 6 C5' C A2420 -104.262 -49.607 31.775 1.00 0.01 C
ATOM 7 C4' C A2420 -105.494 -49.092 32.447 1.00 0.01 C
ATOM 8 O4' C A2420 -105.794 -47.791 31.948 1.00 0.01 O
ATOM 9 C3' C A2420 -106.772 -49.869 32.229 1.00 0.01 C
ATOM 10 O3' C A2420 -106.872 -50.999 33.076 1.00 0.01 O
ATOM 11 C2' C A2420 -107.828 -48.826 32.541 1.00 0.01 C
ATOM 12 O2' C A2420 -108.019 -48.738 33.941 1.00 0.01 O
ATOM 13 C1' C A2420 -107.158 -47.542 32.087 1.00 0.01 C
ATOM 14 N1 C A2420 -107.683 -47.006 30.822 1.00 0.01 N
ATOM 15 C2 C A2420 -108.795 -46.207 30.900 1.00 0.01 C
ATOM 16 O2 C A2420 -109.291 -46.101 32.003 1.00 0.01 O
ATOM 17 N3 C A2420 -109.313 -45.614 29.811 1.00 0.01 N
ATOM 18 C4 C A2420 -108.719 -45.785 28.630 1.00 0.01 C
ATOM 19 N4 C A2420 -109.223 -45.191 27.539 1.00 0.01 N
ATOM 20 C5 C A2420 -107.545 -46.580 28.520 1.00 0.01 C
ATOM 21 C6 C A2420 -107.059 -47.147 29.628 1.00 0.01 C
ATOM 22 P G A2421 -106.212 -52.400 32.668 1.00 0.01 P
ATOM 23 OP1 G A2421 -105.091 -52.111 31.775 1.00 0.01 O
ATOM 24 OP2 G A2421 -107.302 -53.275 32.178 1.00 0.01 O
ATOM 25 O5' G A2421 -105.669 -52.940 34.048 1.00 0.01 O
TER
ATOM 1 O3' U B2250 -107.903 -47.136 20.550 1.00 0.01 O
ATOM 2 P C B2251 -108.191 -46.887 22.075 1.00 0.01 P
ATOM 3 OP1 C B2251 -109.598 -47.311 22.322 1.00 0.01 O
ATOM 4 OP2 C B2251 -107.794 -45.483 22.380 1.00 0.01 O
ATOM 5 O5' C B2251 -107.179 -47.890 22.770 1.00 0.01 O
ATOM 6 C5' C B2251 -107.526 -49.244 22.967 1.00 0.01 C
ATOM 7 C4' C B2251 -106.609 -49.900 23.939 1.00 0.01 C
ATOM 8 O4' C B2251 -105.250 -49.556 23.605 1.00 0.01 O
ATOM 9 C3' C B2251 -106.805 -49.462 25.365 1.00 0.01 C
ATOM 10 O3' C B2251 -106.468 -50.528 26.224 1.00 0.01 O
ATOM 11 C2' C B2251 -105.790 -48.349 25.512 1.00 0.01 C
ATOM 12 O2' C B2251 -105.415 -48.065 26.852 1.00 0.01 O
ATOM 13 C1' C B2251 -104.643 -48.922 24.703 1.00 0.01 C
ATOM 14 N1 C B2251 -103.695 -47.918 24.194 1.00 0.01 N
ATOM 15 C2 C B2251 -102.355 -48.069 24.483 1.00 0.01 C
ATOM 16 O2 C B2251 -101.986 -49.049 25.163 1.00 0.01 O
ATOM 17 N3 C B2251 -101.511 -47.140 24.023 1.00 0.01 N
ATOM 18 C4 C B2251 -101.965 -46.152 23.300 1.00 0.01 C
ATOM 19 N4 C B2251 -101.105 -45.272 22.844 1.00 0.01 N
ATOM 20 C5 C B2251 -103.304 -45.986 22.984 1.00 0.01 C
ATOM 21 C6 C B2251 -104.131 -46.884 23.457 1.00 0.01 C
ATOM 22 P U B2252 -107.351 -51.839 26.226 1.00 0.01 P
ATOM 23 OP1 U B2252 -106.475 -52.923 26.649 1.00 0.01 O
ATOM 24 OP2 U B2252 -108.001 -51.922 24.917 1.00 0.01 O
ATOM 25 O5' U B2252 -108.443 -51.542 27.343 1.00 0.01 O
TER
Atoms:
C2: (-108.795,-46.207,30.900)
OP1: (-102.407,-51.051,30.274)
OP2: (-104.074,-50.848,28.357)
C4: (-108.719,-45.785,28.630)
O5': (-104.281,-49.393,30.374)
C3': (-106.772,-49.869,32.229)
C1': (-107.158,-47.542,32.087)
O4': (-105.794,-47.791,31.948)
C5': (-104.262,-49.607,31.775)
P: (-103.308,-50.211,29.443)
O2: (-109.291,-46.101,32.003)
C4': (-105.494,-49.092,32.447)
C2': (-107.828,-48.826,32.541)
O2': (-108.019,-48.738,33.941)
N1: (-107.683,-47.006,30.822)
N3: (-109.313,-45.614,29.811)
N4: (-109.223,-45.191,27.539)
C6: (-107.059,-47.147,29.628)
C5: (-107.545,-46.580,28.520)
O3': (-106.872,-50.999,33.076)
OP1: (-102.407,-51.051,30.274)
OP2: (-104.074,-50.848,28.357)
C4: (-108.719,-45.785,28.630)
O5': (-104.281,-49.393,30.374)
C3': (-106.772,-49.869,32.229)
C1': (-107.158,-47.542,32.087)
O4': (-105.794,-47.791,31.948)
C5': (-104.262,-49.607,31.775)
P: (-103.308,-50.211,29.443)
O2: (-109.291,-46.101,32.003)
C4': (-105.494,-49.092,32.447)
C2': (-107.828,-48.826,32.541)
O2': (-108.019,-48.738,33.941)
N1: (-107.683,-47.006,30.822)
N3: (-109.313,-45.614,29.811)
N4: (-109.223,-45.191,27.539)
C6: (-107.059,-47.147,29.628)
C5: (-107.545,-46.580,28.520)
O3': (-106.872,-50.999,33.076)
C2: (-102.355,-48.069,24.483)
OP1: (-109.598,-47.311,22.322)
OP2: (-107.794,-45.483,22.380)
C4: (-101.965,-46.152,23.300)
O5': (-107.179,-47.890,22.770)
C3': (-106.805,-49.462,25.365)
C1': (-104.643,-48.922,24.703)
O4': (-105.250,-49.556,23.605)
C5': (-107.526,-49.244,22.967)
P: (-108.191,-46.887,22.075)
O2: (-101.986,-49.049,25.163)
C4': (-106.609,-49.900,23.939)
C2': (-105.790,-48.349,25.512)
O2': (-105.415,-48.065,26.852)
N1: (-103.695,-47.918,24.194)
N3: (-101.511,-47.140,24.023)
N4: (-101.105,-45.272,22.844)
C6: (-104.131,-46.884,23.457)
C5: (-103.304,-45.986,22.984)
O3': (-106.468,-50.528,26.224)
OP1: (-109.598,-47.311,22.322)
OP2: (-107.794,-45.483,22.380)
C4: (-101.965,-46.152,23.300)
O5': (-107.179,-47.890,22.770)
C3': (-106.805,-49.462,25.365)
C1': (-104.643,-48.922,24.703)
O4': (-105.250,-49.556,23.605)
C5': (-107.526,-49.244,22.967)
P: (-108.191,-46.887,22.075)
O2: (-101.986,-49.049,25.163)
C4': (-106.609,-49.900,23.939)
C2': (-105.790,-48.349,25.512)
O2': (-105.415,-48.065,26.852)
N1: (-103.695,-47.918,24.194)
N3: (-101.511,-47.140,24.023)
N4: (-101.105,-45.272,22.844)
C6: (-104.131,-46.884,23.457)
C5: (-103.304,-45.986,22.984)
O3': (-106.468,-50.528,26.224)
Image (generated by PyMOL):