Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A10:A38
Extra
PDB:
ATOM 1 O3' A A 9 14.291 -16.037 -19.412 1.00 50.64 O
ATOM 2 P C A 10 14.262 -14.604 -20.142 1.00 49.22 P
ATOM 3 OP1 C A 10 13.931 -13.592 -19.109 1.00 39.91 O
ATOM 4 OP2 C A 10 13.373 -14.733 -21.323 1.00 46.61 O
ATOM 5 O5' C A 10 15.772 -14.419 -20.618 1.00 50.27 O
ATOM 6 C5' C A 10 16.589 -13.393 -20.072 1.00 49.90 C
ATOM 7 C4' C A 10 18.056 -13.666 -20.301 1.00 46.95 C
ATOM 8 O4' C A 10 18.415 -14.952 -19.729 1.00 49.41 O
ATOM 9 C3' C A 10 18.502 -13.779 -21.750 1.00 47.24 C
ATOM 10 O3' C A 10 18.680 -12.522 -22.379 1.00 51.53 O
ATOM 11 C2' C A 10 19.783 -14.591 -21.633 1.00 44.60 C
ATOM 12 O2' C A 10 20.852 -13.779 -21.170 1.00 46.45 O
ATOM 13 C1' C A 10 19.409 -15.569 -20.524 1.00 47.86 C
ATOM 14 N1 C A 10 18.867 -16.831 -21.065 1.00 44.56 N
ATOM 15 C2 C A 10 19.770 -17.800 -21.505 1.00 44.04 C
ATOM 16 O2 C A 10 20.985 -17.564 -21.426 1.00 46.20 O
ATOM 17 N3 C A 10 19.295 -18.961 -22.004 1.00 43.08 N
ATOM 18 C4 C A 10 17.980 -19.168 -22.070 1.00 42.77 C
ATOM 19 N4 C A 10 17.563 -20.333 -22.571 1.00 43.71 N
ATOM 20 C5 C A 10 17.036 -18.196 -21.627 1.00 43.95 C
ATOM 21 C6 C A 10 17.520 -17.049 -21.136 1.00 44.02 C
ATOM 22 P U A 11 18.557 -12.398 -23.977 1.00 50.86 P
ATOM 23 OP1 U A 11 18.785 -10.973 -24.327 1.00 42.77 O
ATOM 24 OP2 U A 11 17.274 -13.028 -24.364 1.00 44.44 O
ATOM 25 O5' U A 11 19.773 -13.284 -24.496 1.00 43.03 O
TER
ATOM 1 O3' A B 37 8.918 -23.965 -19.833 1.00 46.63 O
ATOM 2 P C B 38 8.844 -23.583 -21.393 1.00 58.41 P
ATOM 3 OP1 C B 38 7.494 -23.023 -21.640 1.00 55.82 O
ATOM 4 OP2 C B 38 9.270 -24.782 -22.157 1.00 47.59 O
ATOM 5 O5' C B 38 9.938 -22.436 -21.532 1.00 48.72 O
ATOM 6 C5' C B 38 9.718 -21.146 -20.979 1.00 49.63 C
ATOM 7 C4' C B 38 11.003 -20.360 -20.884 1.00 51.45 C
ATOM 8 O4' C B 38 11.977 -21.111 -20.114 1.00 45.54 O
ATOM 9 C3' C B 38 11.712 -20.070 -22.202 1.00 49.92 C
ATOM 10 O3' C B 38 11.176 -18.948 -22.885 1.00 57.72 O
ATOM 11 C2' C B 38 13.160 -19.877 -21.767 1.00 48.50 C
ATOM 12 O2' C B 38 13.356 -18.571 -21.244 1.00 47.41 O
ATOM 13 C1' C B 38 13.274 -20.879 -20.617 1.00 42.92 C
ATOM 14 N1 C B 38 13.853 -22.171 -21.053 1.00 39.55 N
ATOM 15 C2 C B 38 15.212 -22.383 -20.813 1.00 40.32 C
ATOM 16 O2 C B 38 15.859 -21.483 -20.257 1.00 40.17 O
ATOM 17 N3 C B 38 15.781 -23.551 -21.192 1.00 38.05 N
ATOM 18 C4 C B 38 15.042 -24.489 -21.787 1.00 38.00 C
ATOM 19 N4 C B 38 15.639 -25.629 -22.147 1.00 39.41 N
ATOM 20 C5 C B 38 13.653 -24.300 -22.042 1.00 42.62 C
ATOM 21 C6 C B 38 13.103 -23.139 -21.661 1.00 42.05 C
ATOM 22 P C B 39 9.927 -19.120 -23.883 1.00 57.30 P
ATOM 23 OP1 C B 39 9.435 -20.512 -23.738 1.00 51.84 O
ATOM 24 OP2 C B 39 10.370 -18.657 -25.221 1.00 61.19 O
ATOM 25 O5' C B 39 8.858 -18.102 -23.284 1.00 56.71 O
TER
ATOM 2 P C A 10 14.262 -14.604 -20.142 1.00 49.22 P
ATOM 3 OP1 C A 10 13.931 -13.592 -19.109 1.00 39.91 O
ATOM 4 OP2 C A 10 13.373 -14.733 -21.323 1.00 46.61 O
ATOM 5 O5' C A 10 15.772 -14.419 -20.618 1.00 50.27 O
ATOM 6 C5' C A 10 16.589 -13.393 -20.072 1.00 49.90 C
ATOM 7 C4' C A 10 18.056 -13.666 -20.301 1.00 46.95 C
ATOM 8 O4' C A 10 18.415 -14.952 -19.729 1.00 49.41 O
ATOM 9 C3' C A 10 18.502 -13.779 -21.750 1.00 47.24 C
ATOM 10 O3' C A 10 18.680 -12.522 -22.379 1.00 51.53 O
ATOM 11 C2' C A 10 19.783 -14.591 -21.633 1.00 44.60 C
ATOM 12 O2' C A 10 20.852 -13.779 -21.170 1.00 46.45 O
ATOM 13 C1' C A 10 19.409 -15.569 -20.524 1.00 47.86 C
ATOM 14 N1 C A 10 18.867 -16.831 -21.065 1.00 44.56 N
ATOM 15 C2 C A 10 19.770 -17.800 -21.505 1.00 44.04 C
ATOM 16 O2 C A 10 20.985 -17.564 -21.426 1.00 46.20 O
ATOM 17 N3 C A 10 19.295 -18.961 -22.004 1.00 43.08 N
ATOM 18 C4 C A 10 17.980 -19.168 -22.070 1.00 42.77 C
ATOM 19 N4 C A 10 17.563 -20.333 -22.571 1.00 43.71 N
ATOM 20 C5 C A 10 17.036 -18.196 -21.627 1.00 43.95 C
ATOM 21 C6 C A 10 17.520 -17.049 -21.136 1.00 44.02 C
ATOM 22 P U A 11 18.557 -12.398 -23.977 1.00 50.86 P
ATOM 23 OP1 U A 11 18.785 -10.973 -24.327 1.00 42.77 O
ATOM 24 OP2 U A 11 17.274 -13.028 -24.364 1.00 44.44 O
ATOM 25 O5' U A 11 19.773 -13.284 -24.496 1.00 43.03 O
TER
ATOM 1 O3' A B 37 8.918 -23.965 -19.833 1.00 46.63 O
ATOM 2 P C B 38 8.844 -23.583 -21.393 1.00 58.41 P
ATOM 3 OP1 C B 38 7.494 -23.023 -21.640 1.00 55.82 O
ATOM 4 OP2 C B 38 9.270 -24.782 -22.157 1.00 47.59 O
ATOM 5 O5' C B 38 9.938 -22.436 -21.532 1.00 48.72 O
ATOM 6 C5' C B 38 9.718 -21.146 -20.979 1.00 49.63 C
ATOM 7 C4' C B 38 11.003 -20.360 -20.884 1.00 51.45 C
ATOM 8 O4' C B 38 11.977 -21.111 -20.114 1.00 45.54 O
ATOM 9 C3' C B 38 11.712 -20.070 -22.202 1.00 49.92 C
ATOM 10 O3' C B 38 11.176 -18.948 -22.885 1.00 57.72 O
ATOM 11 C2' C B 38 13.160 -19.877 -21.767 1.00 48.50 C
ATOM 12 O2' C B 38 13.356 -18.571 -21.244 1.00 47.41 O
ATOM 13 C1' C B 38 13.274 -20.879 -20.617 1.00 42.92 C
ATOM 14 N1 C B 38 13.853 -22.171 -21.053 1.00 39.55 N
ATOM 15 C2 C B 38 15.212 -22.383 -20.813 1.00 40.32 C
ATOM 16 O2 C B 38 15.859 -21.483 -20.257 1.00 40.17 O
ATOM 17 N3 C B 38 15.781 -23.551 -21.192 1.00 38.05 N
ATOM 18 C4 C B 38 15.042 -24.489 -21.787 1.00 38.00 C
ATOM 19 N4 C B 38 15.639 -25.629 -22.147 1.00 39.41 N
ATOM 20 C5 C B 38 13.653 -24.300 -22.042 1.00 42.62 C
ATOM 21 C6 C B 38 13.103 -23.139 -21.661 1.00 42.05 C
ATOM 22 P C B 39 9.927 -19.120 -23.883 1.00 57.30 P
ATOM 23 OP1 C B 39 9.435 -20.512 -23.738 1.00 51.84 O
ATOM 24 OP2 C B 39 10.370 -18.657 -25.221 1.00 61.19 O
ATOM 25 O5' C B 39 8.858 -18.102 -23.284 1.00 56.71 O
TER
Atoms:
C2: (19.770,-17.800,-21.505)
OP1: (13.931,-13.592,-19.109)
OP2: (13.373,-14.733,-21.323)
C4: (17.980,-19.168,-22.070)
O5': (15.772,-14.419,-20.618)
C3': (18.502,-13.779,-21.750)
C1': (19.409,-15.569,-20.524)
O4': (18.415,-14.952,-19.729)
C5': (16.589,-13.393,-20.072)
P: (14.262,-14.604,-20.142)
O2: (20.985,-17.564,-21.426)
C4': (18.056,-13.666,-20.301)
C2': (19.783,-14.591,-21.633)
O2': (20.852,-13.779,-21.170)
N1: (18.867,-16.831,-21.065)
N3: (19.295,-18.961,-22.004)
N4: (17.563,-20.333,-22.571)
C6: (17.520,-17.049,-21.136)
C5: (17.036,-18.196,-21.627)
O3': (18.680,-12.522,-22.379)
OP1: (13.931,-13.592,-19.109)
OP2: (13.373,-14.733,-21.323)
C4: (17.980,-19.168,-22.070)
O5': (15.772,-14.419,-20.618)
C3': (18.502,-13.779,-21.750)
C1': (19.409,-15.569,-20.524)
O4': (18.415,-14.952,-19.729)
C5': (16.589,-13.393,-20.072)
P: (14.262,-14.604,-20.142)
O2: (20.985,-17.564,-21.426)
C4': (18.056,-13.666,-20.301)
C2': (19.783,-14.591,-21.633)
O2': (20.852,-13.779,-21.170)
N1: (18.867,-16.831,-21.065)
N3: (19.295,-18.961,-22.004)
N4: (17.563,-20.333,-22.571)
C6: (17.520,-17.049,-21.136)
C5: (17.036,-18.196,-21.627)
O3': (18.680,-12.522,-22.379)
C2: (15.212,-22.383,-20.813)
OP1: (7.494,-23.023,-21.640)
OP2: (9.270,-24.782,-22.157)
C4: (15.042,-24.489,-21.787)
O5': (9.938,-22.436,-21.532)
C3': (11.712,-20.070,-22.202)
C1': (13.274,-20.879,-20.617)
O4': (11.977,-21.111,-20.114)
C5': (9.718,-21.146,-20.979)
P: (8.844,-23.583,-21.393)
O2: (15.859,-21.483,-20.257)
C4': (11.003,-20.360,-20.884)
C2': (13.160,-19.877,-21.767)
O2': (13.356,-18.571,-21.244)
N1: (13.853,-22.171,-21.053)
N3: (15.781,-23.551,-21.192)
N4: (15.639,-25.629,-22.147)
C6: (13.103,-23.139,-21.661)
C5: (13.653,-24.300,-22.042)
O3': (11.176,-18.948,-22.885)
OP1: (7.494,-23.023,-21.640)
OP2: (9.270,-24.782,-22.157)
C4: (15.042,-24.489,-21.787)
O5': (9.938,-22.436,-21.532)
C3': (11.712,-20.070,-22.202)
C1': (13.274,-20.879,-20.617)
O4': (11.977,-21.111,-20.114)
C5': (9.718,-21.146,-20.979)
P: (8.844,-23.583,-21.393)
O2: (15.859,-21.483,-20.257)
C4': (11.003,-20.360,-20.884)
C2': (13.160,-19.877,-21.767)
O2': (13.356,-18.571,-21.244)
N1: (13.853,-22.171,-21.053)
N3: (15.781,-23.551,-21.192)
N4: (15.639,-25.629,-22.147)
C6: (13.103,-23.139,-21.661)
C5: (13.653,-24.300,-22.042)
O3': (11.176,-18.948,-22.885)
Image (generated by PyMOL):