Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:B10:B38
Extra
PDB:
ATOM 1 O3' A A 9 30.706 -5.289 -30.869 1.00 47.27 O
ATOM 2 P C A 10 29.393 -4.638 -30.204 1.00 53.67 P
ATOM 3 OP1 C A 10 28.703 -3.860 -31.262 1.00 45.06 O
ATOM 4 OP2 C A 10 29.831 -3.934 -28.974 1.00 44.90 O
ATOM 5 O5' C A 10 28.523 -5.915 -29.817 1.00 50.93 O
ATOM 6 C5' C A 10 27.435 -6.328 -30.631 1.00 43.14 C
ATOM 7 C4' C A 10 27.200 -7.816 -30.538 1.00 43.91 C
ATOM 8 O4' C A 10 28.347 -8.535 -31.059 1.00 41.70 O
ATOM 9 C3' C A 10 27.019 -8.384 -29.139 1.00 47.61 C
ATOM 10 O3' C A 10 25.713 -8.178 -28.625 1.00 54.31 O
ATOM 11 C2' C A 10 27.374 -9.854 -29.331 1.00 43.05 C
ATOM 12 O2' C A 10 26.280 -10.564 -29.891 1.00 41.91 O
ATOM 13 C1' C A 10 28.482 -9.769 -30.384 1.00 41.76 C
ATOM 14 N1 C A 10 29.834 -9.842 -29.786 1.00 43.64 N
ATOM 15 C2 C A 10 30.239 -11.051 -29.214 1.00 40.82 C
ATOM 16 O2 C A 10 29.453 -12.008 -29.211 1.00 41.02 O
ATOM 17 N3 C A 10 31.472 -11.149 -28.668 1.00 43.92 N
ATOM 18 C4 C A 10 32.293 -10.099 -28.687 1.00 46.47 C
ATOM 19 N4 C A 10 33.502 -10.242 -28.136 1.00 47.23 N
ATOM 20 C5 C A 10 31.912 -8.854 -29.272 1.00 45.32 C
ATOM 21 C6 C A 10 30.686 -8.772 -29.809 1.00 45.84 C
ATOM 22 P U A 11 25.491 -7.921 -27.053 1.00 49.56 P
ATOM 23 OP1 U A 11 24.098 -7.440 -26.884 1.00 44.11 O
ATOM 24 OP2 U A 11 26.603 -7.059 -26.588 1.00 51.81 O
ATOM 25 O5' U A 11 25.639 -9.380 -26.432 1.00 47.79 O
TER
ATOM 1 O3' A B 37 40.653 -4.468 -30.046 1.00 49.41 O
ATOM 2 P C B 38 40.330 -4.388 -28.474 1.00 56.05 P
ATOM 3 OP1 C B 38 40.684 -3.020 -28.025 1.00 56.26 O
ATOM 4 OP2 C B 38 41.000 -5.546 -27.830 1.00 50.10 O
ATOM 5 O5' C B 38 38.749 -4.582 -28.423 1.00 60.53 O
ATOM 6 C5' C B 38 37.882 -3.747 -29.181 1.00 56.77 C
ATOM 7 C4' C B 38 36.537 -4.399 -29.391 1.00 53.69 C
ATOM 8 O4' C B 38 36.692 -5.579 -30.222 1.00 49.05 O
ATOM 9 C3' C B 38 35.845 -4.907 -28.134 1.00 50.06 C
ATOM 10 O3' C B 38 35.120 -3.894 -27.457 1.00 49.87 O
ATOM 11 C2' C B 38 34.966 -6.037 -28.654 1.00 48.79 C
ATOM 12 O2' C B 38 33.769 -5.523 -29.213 1.00 49.23 O
ATOM 13 C1' C B 38 35.825 -6.602 -29.786 1.00 48.93 C
ATOM 14 N1 C B 38 36.642 -7.753 -29.344 1.00 51.16 N
ATOM 15 C2 C B 38 36.207 -9.045 -29.648 1.00 52.62 C
ATOM 16 O2 C B 38 35.147 -9.180 -30.274 1.00 55.46 O
ATOM 17 N3 C B 38 36.949 -10.106 -29.252 1.00 49.67 N
ATOM 18 C4 C B 38 38.087 -9.912 -28.579 1.00 51.74 C
ATOM 19 N4 C B 38 38.792 -10.984 -28.205 1.00 58.10 N
ATOM 20 C5 C B 38 38.556 -8.605 -28.257 1.00 53.42 C
ATOM 21 C6 C B 38 37.810 -7.567 -28.657 1.00 53.83 C
ATOM 22 P C B 39 35.786 -3.110 -26.223 1.00 58.14 P
ATOM 23 OP1 C B 39 37.215 -3.497 -26.180 1.00 58.17 O
ATOM 24 OP2 C B 39 34.943 -3.374 -25.033 1.00 60.43 O
ATOM 25 O5' C B 39 35.651 -1.582 -26.659 1.00 61.89 O
TER
ATOM 2 P C A 10 29.393 -4.638 -30.204 1.00 53.67 P
ATOM 3 OP1 C A 10 28.703 -3.860 -31.262 1.00 45.06 O
ATOM 4 OP2 C A 10 29.831 -3.934 -28.974 1.00 44.90 O
ATOM 5 O5' C A 10 28.523 -5.915 -29.817 1.00 50.93 O
ATOM 6 C5' C A 10 27.435 -6.328 -30.631 1.00 43.14 C
ATOM 7 C4' C A 10 27.200 -7.816 -30.538 1.00 43.91 C
ATOM 8 O4' C A 10 28.347 -8.535 -31.059 1.00 41.70 O
ATOM 9 C3' C A 10 27.019 -8.384 -29.139 1.00 47.61 C
ATOM 10 O3' C A 10 25.713 -8.178 -28.625 1.00 54.31 O
ATOM 11 C2' C A 10 27.374 -9.854 -29.331 1.00 43.05 C
ATOM 12 O2' C A 10 26.280 -10.564 -29.891 1.00 41.91 O
ATOM 13 C1' C A 10 28.482 -9.769 -30.384 1.00 41.76 C
ATOM 14 N1 C A 10 29.834 -9.842 -29.786 1.00 43.64 N
ATOM 15 C2 C A 10 30.239 -11.051 -29.214 1.00 40.82 C
ATOM 16 O2 C A 10 29.453 -12.008 -29.211 1.00 41.02 O
ATOM 17 N3 C A 10 31.472 -11.149 -28.668 1.00 43.92 N
ATOM 18 C4 C A 10 32.293 -10.099 -28.687 1.00 46.47 C
ATOM 19 N4 C A 10 33.502 -10.242 -28.136 1.00 47.23 N
ATOM 20 C5 C A 10 31.912 -8.854 -29.272 1.00 45.32 C
ATOM 21 C6 C A 10 30.686 -8.772 -29.809 1.00 45.84 C
ATOM 22 P U A 11 25.491 -7.921 -27.053 1.00 49.56 P
ATOM 23 OP1 U A 11 24.098 -7.440 -26.884 1.00 44.11 O
ATOM 24 OP2 U A 11 26.603 -7.059 -26.588 1.00 51.81 O
ATOM 25 O5' U A 11 25.639 -9.380 -26.432 1.00 47.79 O
TER
ATOM 1 O3' A B 37 40.653 -4.468 -30.046 1.00 49.41 O
ATOM 2 P C B 38 40.330 -4.388 -28.474 1.00 56.05 P
ATOM 3 OP1 C B 38 40.684 -3.020 -28.025 1.00 56.26 O
ATOM 4 OP2 C B 38 41.000 -5.546 -27.830 1.00 50.10 O
ATOM 5 O5' C B 38 38.749 -4.582 -28.423 1.00 60.53 O
ATOM 6 C5' C B 38 37.882 -3.747 -29.181 1.00 56.77 C
ATOM 7 C4' C B 38 36.537 -4.399 -29.391 1.00 53.69 C
ATOM 8 O4' C B 38 36.692 -5.579 -30.222 1.00 49.05 O
ATOM 9 C3' C B 38 35.845 -4.907 -28.134 1.00 50.06 C
ATOM 10 O3' C B 38 35.120 -3.894 -27.457 1.00 49.87 O
ATOM 11 C2' C B 38 34.966 -6.037 -28.654 1.00 48.79 C
ATOM 12 O2' C B 38 33.769 -5.523 -29.213 1.00 49.23 O
ATOM 13 C1' C B 38 35.825 -6.602 -29.786 1.00 48.93 C
ATOM 14 N1 C B 38 36.642 -7.753 -29.344 1.00 51.16 N
ATOM 15 C2 C B 38 36.207 -9.045 -29.648 1.00 52.62 C
ATOM 16 O2 C B 38 35.147 -9.180 -30.274 1.00 55.46 O
ATOM 17 N3 C B 38 36.949 -10.106 -29.252 1.00 49.67 N
ATOM 18 C4 C B 38 38.087 -9.912 -28.579 1.00 51.74 C
ATOM 19 N4 C B 38 38.792 -10.984 -28.205 1.00 58.10 N
ATOM 20 C5 C B 38 38.556 -8.605 -28.257 1.00 53.42 C
ATOM 21 C6 C B 38 37.810 -7.567 -28.657 1.00 53.83 C
ATOM 22 P C B 39 35.786 -3.110 -26.223 1.00 58.14 P
ATOM 23 OP1 C B 39 37.215 -3.497 -26.180 1.00 58.17 O
ATOM 24 OP2 C B 39 34.943 -3.374 -25.033 1.00 60.43 O
ATOM 25 O5' C B 39 35.651 -1.582 -26.659 1.00 61.89 O
TER
Atoms:
C2: (30.239,-11.051,-29.214)
OP1: (28.703,-3.860,-31.262)
OP2: (29.831,-3.934,-28.974)
C4: (32.293,-10.099,-28.687)
O5': (28.523,-5.915,-29.817)
C3': (27.019,-8.384,-29.139)
C1': (28.482,-9.769,-30.384)
O4': (28.347,-8.535,-31.059)
C5': (27.435,-6.328,-30.631)
P: (29.393,-4.638,-30.204)
O2: (29.453,-12.008,-29.211)
C4': (27.200,-7.816,-30.538)
C2': (27.374,-9.854,-29.331)
O2': (26.280,-10.564,-29.891)
N1: (29.834,-9.842,-29.786)
N3: (31.472,-11.149,-28.668)
N4: (33.502,-10.242,-28.136)
C6: (30.686,-8.772,-29.809)
C5: (31.912,-8.854,-29.272)
O3': (25.713,-8.178,-28.625)
OP1: (28.703,-3.860,-31.262)
OP2: (29.831,-3.934,-28.974)
C4: (32.293,-10.099,-28.687)
O5': (28.523,-5.915,-29.817)
C3': (27.019,-8.384,-29.139)
C1': (28.482,-9.769,-30.384)
O4': (28.347,-8.535,-31.059)
C5': (27.435,-6.328,-30.631)
P: (29.393,-4.638,-30.204)
O2: (29.453,-12.008,-29.211)
C4': (27.200,-7.816,-30.538)
C2': (27.374,-9.854,-29.331)
O2': (26.280,-10.564,-29.891)
N1: (29.834,-9.842,-29.786)
N3: (31.472,-11.149,-28.668)
N4: (33.502,-10.242,-28.136)
C6: (30.686,-8.772,-29.809)
C5: (31.912,-8.854,-29.272)
O3': (25.713,-8.178,-28.625)
C2: (36.207,-9.045,-29.648)
OP1: (40.684,-3.020,-28.025)
OP2: (41.000,-5.546,-27.830)
C4: (38.087,-9.912,-28.579)
O5': (38.749,-4.582,-28.423)
C3': (35.845,-4.907,-28.134)
C1': (35.825,-6.602,-29.786)
O4': (36.692,-5.579,-30.222)
C5': (37.882,-3.747,-29.181)
P: (40.330,-4.388,-28.474)
O2: (35.147,-9.180,-30.274)
C4': (36.537,-4.399,-29.391)
C2': (34.966,-6.037,-28.654)
O2': (33.769,-5.523,-29.213)
N1: (36.642,-7.753,-29.344)
N3: (36.949,-10.106,-29.252)
N4: (38.792,-10.984,-28.205)
C6: (37.810,-7.567,-28.657)
C5: (38.556,-8.605,-28.257)
O3': (35.120,-3.894,-27.457)
OP1: (40.684,-3.020,-28.025)
OP2: (41.000,-5.546,-27.830)
C4: (38.087,-9.912,-28.579)
O5': (38.749,-4.582,-28.423)
C3': (35.845,-4.907,-28.134)
C1': (35.825,-6.602,-29.786)
O4': (36.692,-5.579,-30.222)
C5': (37.882,-3.747,-29.181)
P: (40.330,-4.388,-28.474)
O2: (35.147,-9.180,-30.274)
C4': (36.537,-4.399,-29.391)
C2': (34.966,-6.037,-28.654)
O2': (33.769,-5.523,-29.213)
N1: (36.642,-7.753,-29.344)
N3: (36.949,-10.106,-29.252)
N4: (38.792,-10.984,-28.205)
C6: (37.810,-7.567,-28.657)
C5: (38.556,-8.605,-28.257)
O3': (35.120,-3.894,-27.457)
Image (generated by PyMOL):