Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:B39:B38
Extra
PDB:
ATOM 1 O3' C A 38 35.120 -3.894 -27.457 1.00 49.87 O
ATOM 2 P C A 39 35.786 -3.110 -26.223 1.00 58.14 P
ATOM 3 OP1 C A 39 37.215 -3.497 -26.180 1.00 58.17 O
ATOM 4 OP2 C A 39 34.943 -3.374 -25.033 1.00 60.43 O
ATOM 5 O5' C A 39 35.651 -1.582 -26.659 1.00 61.89 O
ATOM 6 C5' C A 39 36.647 -0.632 -26.308 1.00 59.29 C
ATOM 7 C4' C A 39 36.920 0.331 -27.438 1.00 58.67 C
ATOM 8 O4' C A 39 36.786 -0.355 -28.712 1.00 58.14 O
ATOM 9 C3' C A 39 35.970 1.515 -27.555 1.00 58.32 C
ATOM 10 O3' C A 39 36.291 2.576 -26.670 1.00 55.42 O
ATOM 11 C2' C A 39 36.086 1.891 -29.026 1.00 60.57 C
ATOM 12 O2' C A 39 37.279 2.623 -29.267 1.00 57.98 O
ATOM 13 C1' C A 39 36.225 0.514 -29.675 1.00 55.89 C
ATOM 14 N1 C A 39 34.915 -0.031 -30.097 1.00 47.52 N
ATOM 15 C2 C A 39 34.183 0.647 -31.076 1.00 49.49 C
ATOM 16 O2 C A 39 34.653 1.684 -31.568 1.00 50.89 O
ATOM 17 N3 C A 39 32.982 0.160 -31.463 1.00 47.49 N
ATOM 18 C4 C A 39 32.505 -0.957 -30.912 1.00 48.73 C
ATOM 19 N4 C A 39 31.314 -1.402 -31.325 1.00 47.05 N
ATOM 20 C5 C A 39 33.231 -1.668 -29.911 1.00 52.49 C
ATOM 21 C6 C A 39 34.418 -1.174 -29.538 1.00 51.23 C
ATOM 22 P G A 40 35.202 3.712 -26.343 1.00 56.72 P
ATOM 23 OP1 G A 40 35.787 4.593 -25.303 1.00 61.31 O
ATOM 24 OP2 G A 40 33.923 3.019 -26.052 1.00 53.07 O
ATOM 25 O5' G A 40 35.088 4.504 -27.720 1.00 51.05 O
TER
ATOM 1 O3' A B 37 40.653 -4.468 -30.046 1.00 49.41 O
ATOM 2 P C B 38 40.330 -4.388 -28.474 1.00 56.05 P
ATOM 3 OP1 C B 38 40.684 -3.020 -28.025 1.00 56.26 O
ATOM 4 OP2 C B 38 41.000 -5.546 -27.830 1.00 50.10 O
ATOM 5 O5' C B 38 38.749 -4.582 -28.423 1.00 60.53 O
ATOM 6 C5' C B 38 37.882 -3.747 -29.181 1.00 56.77 C
ATOM 7 C4' C B 38 36.537 -4.399 -29.391 1.00 53.69 C
ATOM 8 O4' C B 38 36.692 -5.579 -30.222 1.00 49.05 O
ATOM 9 C3' C B 38 35.845 -4.907 -28.134 1.00 50.06 C
ATOM 10 O3' C B 38 35.120 -3.894 -27.457 1.00 49.87 O
ATOM 11 C2' C B 38 34.966 -6.037 -28.654 1.00 48.79 C
ATOM 12 O2' C B 38 33.769 -5.523 -29.213 1.00 49.23 O
ATOM 13 C1' C B 38 35.825 -6.602 -29.786 1.00 48.93 C
ATOM 14 N1 C B 38 36.642 -7.753 -29.344 1.00 51.16 N
ATOM 15 C2 C B 38 36.207 -9.045 -29.648 1.00 52.62 C
ATOM 16 O2 C B 38 35.147 -9.180 -30.274 1.00 55.46 O
ATOM 17 N3 C B 38 36.949 -10.106 -29.252 1.00 49.67 N
ATOM 18 C4 C B 38 38.087 -9.912 -28.579 1.00 51.74 C
ATOM 19 N4 C B 38 38.792 -10.984 -28.205 1.00 58.10 N
ATOM 20 C5 C B 38 38.556 -8.605 -28.257 1.00 53.42 C
ATOM 21 C6 C B 38 37.810 -7.567 -28.657 1.00 53.83 C
ATOM 22 P C B 39 35.786 -3.110 -26.223 1.00 58.14 P
ATOM 23 OP1 C B 39 37.215 -3.497 -26.180 1.00 58.17 O
ATOM 24 OP2 C B 39 34.943 -3.374 -25.033 1.00 60.43 O
ATOM 25 O5' C B 39 35.651 -1.582 -26.659 1.00 61.89 O
TER
ATOM 2 P C A 39 35.786 -3.110 -26.223 1.00 58.14 P
ATOM 3 OP1 C A 39 37.215 -3.497 -26.180 1.00 58.17 O
ATOM 4 OP2 C A 39 34.943 -3.374 -25.033 1.00 60.43 O
ATOM 5 O5' C A 39 35.651 -1.582 -26.659 1.00 61.89 O
ATOM 6 C5' C A 39 36.647 -0.632 -26.308 1.00 59.29 C
ATOM 7 C4' C A 39 36.920 0.331 -27.438 1.00 58.67 C
ATOM 8 O4' C A 39 36.786 -0.355 -28.712 1.00 58.14 O
ATOM 9 C3' C A 39 35.970 1.515 -27.555 1.00 58.32 C
ATOM 10 O3' C A 39 36.291 2.576 -26.670 1.00 55.42 O
ATOM 11 C2' C A 39 36.086 1.891 -29.026 1.00 60.57 C
ATOM 12 O2' C A 39 37.279 2.623 -29.267 1.00 57.98 O
ATOM 13 C1' C A 39 36.225 0.514 -29.675 1.00 55.89 C
ATOM 14 N1 C A 39 34.915 -0.031 -30.097 1.00 47.52 N
ATOM 15 C2 C A 39 34.183 0.647 -31.076 1.00 49.49 C
ATOM 16 O2 C A 39 34.653 1.684 -31.568 1.00 50.89 O
ATOM 17 N3 C A 39 32.982 0.160 -31.463 1.00 47.49 N
ATOM 18 C4 C A 39 32.505 -0.957 -30.912 1.00 48.73 C
ATOM 19 N4 C A 39 31.314 -1.402 -31.325 1.00 47.05 N
ATOM 20 C5 C A 39 33.231 -1.668 -29.911 1.00 52.49 C
ATOM 21 C6 C A 39 34.418 -1.174 -29.538 1.00 51.23 C
ATOM 22 P G A 40 35.202 3.712 -26.343 1.00 56.72 P
ATOM 23 OP1 G A 40 35.787 4.593 -25.303 1.00 61.31 O
ATOM 24 OP2 G A 40 33.923 3.019 -26.052 1.00 53.07 O
ATOM 25 O5' G A 40 35.088 4.504 -27.720 1.00 51.05 O
TER
ATOM 1 O3' A B 37 40.653 -4.468 -30.046 1.00 49.41 O
ATOM 2 P C B 38 40.330 -4.388 -28.474 1.00 56.05 P
ATOM 3 OP1 C B 38 40.684 -3.020 -28.025 1.00 56.26 O
ATOM 4 OP2 C B 38 41.000 -5.546 -27.830 1.00 50.10 O
ATOM 5 O5' C B 38 38.749 -4.582 -28.423 1.00 60.53 O
ATOM 6 C5' C B 38 37.882 -3.747 -29.181 1.00 56.77 C
ATOM 7 C4' C B 38 36.537 -4.399 -29.391 1.00 53.69 C
ATOM 8 O4' C B 38 36.692 -5.579 -30.222 1.00 49.05 O
ATOM 9 C3' C B 38 35.845 -4.907 -28.134 1.00 50.06 C
ATOM 10 O3' C B 38 35.120 -3.894 -27.457 1.00 49.87 O
ATOM 11 C2' C B 38 34.966 -6.037 -28.654 1.00 48.79 C
ATOM 12 O2' C B 38 33.769 -5.523 -29.213 1.00 49.23 O
ATOM 13 C1' C B 38 35.825 -6.602 -29.786 1.00 48.93 C
ATOM 14 N1 C B 38 36.642 -7.753 -29.344 1.00 51.16 N
ATOM 15 C2 C B 38 36.207 -9.045 -29.648 1.00 52.62 C
ATOM 16 O2 C B 38 35.147 -9.180 -30.274 1.00 55.46 O
ATOM 17 N3 C B 38 36.949 -10.106 -29.252 1.00 49.67 N
ATOM 18 C4 C B 38 38.087 -9.912 -28.579 1.00 51.74 C
ATOM 19 N4 C B 38 38.792 -10.984 -28.205 1.00 58.10 N
ATOM 20 C5 C B 38 38.556 -8.605 -28.257 1.00 53.42 C
ATOM 21 C6 C B 38 37.810 -7.567 -28.657 1.00 53.83 C
ATOM 22 P C B 39 35.786 -3.110 -26.223 1.00 58.14 P
ATOM 23 OP1 C B 39 37.215 -3.497 -26.180 1.00 58.17 O
ATOM 24 OP2 C B 39 34.943 -3.374 -25.033 1.00 60.43 O
ATOM 25 O5' C B 39 35.651 -1.582 -26.659 1.00 61.89 O
TER
Atoms:
C2: (34.183,0.647,-31.076)
OP1: (37.215,-3.497,-26.180)
OP2: (34.943,-3.374,-25.033)
C4: (32.505,-0.957,-30.912)
O5': (35.651,-1.582,-26.659)
C3': (35.970,1.515,-27.555)
C1': (36.225,0.514,-29.675)
O4': (36.786,-0.355,-28.712)
C5': (36.647,-0.632,-26.308)
P: (35.786,-3.110,-26.223)
O2: (34.653,1.684,-31.568)
C4': (36.920,0.331,-27.438)
C2': (36.086,1.891,-29.026)
O2': (37.279,2.623,-29.267)
N1: (34.915,-0.031,-30.097)
N3: (32.982,0.160,-31.463)
N4: (31.314,-1.402,-31.325)
C6: (34.418,-1.174,-29.538)
C5: (33.231,-1.668,-29.911)
O3': (36.291,2.576,-26.670)
OP1: (37.215,-3.497,-26.180)
OP2: (34.943,-3.374,-25.033)
C4: (32.505,-0.957,-30.912)
O5': (35.651,-1.582,-26.659)
C3': (35.970,1.515,-27.555)
C1': (36.225,0.514,-29.675)
O4': (36.786,-0.355,-28.712)
C5': (36.647,-0.632,-26.308)
P: (35.786,-3.110,-26.223)
O2: (34.653,1.684,-31.568)
C4': (36.920,0.331,-27.438)
C2': (36.086,1.891,-29.026)
O2': (37.279,2.623,-29.267)
N1: (34.915,-0.031,-30.097)
N3: (32.982,0.160,-31.463)
N4: (31.314,-1.402,-31.325)
C6: (34.418,-1.174,-29.538)
C5: (33.231,-1.668,-29.911)
O3': (36.291,2.576,-26.670)
C2: (36.207,-9.045,-29.648)
OP1: (40.684,-3.020,-28.025)
OP2: (41.000,-5.546,-27.830)
C4: (38.087,-9.912,-28.579)
O5': (38.749,-4.582,-28.423)
C3': (35.845,-4.907,-28.134)
C1': (35.825,-6.602,-29.786)
O4': (36.692,-5.579,-30.222)
C5': (37.882,-3.747,-29.181)
P: (40.330,-4.388,-28.474)
O2: (35.147,-9.180,-30.274)
C4': (36.537,-4.399,-29.391)
C2': (34.966,-6.037,-28.654)
O2': (33.769,-5.523,-29.213)
N1: (36.642,-7.753,-29.344)
N3: (36.949,-10.106,-29.252)
N4: (38.792,-10.984,-28.205)
C6: (37.810,-7.567,-28.657)
C5: (38.556,-8.605,-28.257)
O3': (35.120,-3.894,-27.457)
OP1: (40.684,-3.020,-28.025)
OP2: (41.000,-5.546,-27.830)
C4: (38.087,-9.912,-28.579)
O5': (38.749,-4.582,-28.423)
C3': (35.845,-4.907,-28.134)
C1': (35.825,-6.602,-29.786)
O4': (36.692,-5.579,-30.222)
C5': (37.882,-3.747,-29.181)
P: (40.330,-4.388,-28.474)
O2: (35.147,-9.180,-30.274)
C4': (36.537,-4.399,-29.391)
C2': (34.966,-6.037,-28.654)
O2': (33.769,-5.523,-29.213)
N1: (36.642,-7.753,-29.344)
N3: (36.949,-10.106,-29.252)
N4: (38.792,-10.984,-28.205)
C6: (37.810,-7.567,-28.657)
C5: (38.556,-8.605,-28.257)
O3': (35.120,-3.894,-27.457)
Image (generated by PyMOL):