Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D10:D38
Extra
PDB:
ATOM 1 O3' A A 9 20.923 -4.757 -73.305 1.00 51.51 O
ATOM 2 P C A 10 19.669 -5.509 -72.637 1.00 44.85 P
ATOM 3 OP1 C A 10 18.693 -5.780 -73.722 1.00 47.55 O
ATOM 4 OP2 C A 10 19.237 -4.689 -71.480 1.00 39.37 O
ATOM 5 O5' C A 10 20.309 -6.878 -72.125 1.00 47.42 O
ATOM 6 C5' C A 10 20.118 -8.087 -72.847 1.00 48.13 C
ATOM 7 C4' C A 10 21.165 -9.118 -72.504 1.00 47.08 C
ATOM 8 O4' C A 10 22.465 -8.688 -72.987 1.00 49.44 O
ATOM 9 C3' C A 10 21.398 -9.373 -71.024 1.00 46.39 C
ATOM 10 O3' C A 10 20.419 -10.213 -70.439 1.00 53.05 O
ATOM 11 C2' C A 10 22.799 -9.964 -71.013 1.00 43.45 C
ATOM 12 O2' C A 10 22.775 -11.322 -71.428 1.00 40.30 O
ATOM 13 C1' C A 10 23.475 -9.142 -72.107 1.00 42.81 C
ATOM 14 N1 C A 10 24.187 -7.973 -71.554 1.00 40.24 N
ATOM 15 C2 C A 10 25.489 -8.175 -71.098 1.00 41.60 C
ATOM 16 O2 C A 10 25.975 -9.312 -71.181 1.00 43.40 O
ATOM 17 N3 C A 10 26.178 -7.135 -70.581 1.00 38.49 N
ATOM 18 C4 C A 10 25.609 -5.932 -70.514 1.00 35.99 C
ATOM 19 N4 C A 10 26.336 -4.938 -69.996 1.00 36.86 N
ATOM 20 C5 C A 10 24.278 -5.696 -70.973 1.00 35.59 C
ATOM 21 C6 C A 10 23.608 -6.738 -71.480 1.00 39.08 C
ATOM 22 P U A 11 20.117 -10.115 -68.863 1.00 52.15 P
ATOM 23 OP1 U A 11 18.991 -11.033 -68.574 1.00 47.28 O
ATOM 24 OP2 U A 11 19.966 -8.676 -68.538 1.00 52.70 O
ATOM 25 O5' U A 11 21.454 -10.678 -68.211 1.00 39.76 O
TER
ATOM 1 O3' A B 37 25.368 4.215 -72.820 1.00 50.12 O
ATOM 2 P C B 38 25.053 4.157 -71.245 1.00 54.39 P
ATOM 3 OP1 C B 38 23.951 5.117 -70.984 1.00 49.37 O
ATOM 4 OP2 C B 38 26.343 4.341 -70.536 1.00 46.70 O
ATOM 5 O5' C B 38 24.532 2.667 -71.041 1.00 46.22 O
ATOM 6 C5' C B 38 23.332 2.220 -71.654 1.00 49.07 C
ATOM 7 C4' C B 38 23.291 0.716 -71.747 1.00 50.31 C
ATOM 8 O4' C B 38 24.421 0.248 -72.528 1.00 47.77 O
ATOM 9 C3' C B 38 23.411 -0.041 -70.429 1.00 48.48 C
ATOM 10 O3' C B 38 22.181 -0.141 -69.730 1.00 55.84 O
ATOM 11 C2' C B 38 23.966 -1.391 -70.868 1.00 46.93 C
ATOM 12 O2' C B 38 22.929 -2.219 -71.376 1.00 46.33 O
ATOM 13 C1' C B 38 24.875 -0.990 -72.029 1.00 44.33 C
ATOM 14 N1 C B 38 26.286 -0.846 -71.608 1.00 39.95 N
ATOM 15 C2 C B 38 27.154 -1.887 -71.941 1.00 36.56 C
ATOM 16 O2 C B 38 26.701 -2.861 -72.564 1.00 33.37 O
ATOM 17 N3 C B 38 28.453 -1.809 -71.579 1.00 37.15 N
ATOM 18 C4 C B 38 28.892 -0.741 -70.910 1.00 36.04 C
ATOM 19 N4 C B 38 30.183 -0.707 -70.573 1.00 37.76 N
ATOM 20 C5 C B 38 28.029 0.337 -70.556 1.00 36.21 C
ATOM 21 C6 C B 38 26.744 0.247 -70.922 1.00 39.29 C
ATOM 22 P C B 39 21.645 1.080 -68.831 1.00 52.42 P
ATOM 23 OP1 C B 39 22.622 2.187 -68.964 1.00 49.91 O
ATOM 24 OP2 C B 39 21.363 0.536 -67.479 1.00 52.44 O
ATOM 25 O5' C B 39 20.281 1.468 -69.554 1.00 60.94 O
TER
ATOM 2 P C A 10 19.669 -5.509 -72.637 1.00 44.85 P
ATOM 3 OP1 C A 10 18.693 -5.780 -73.722 1.00 47.55 O
ATOM 4 OP2 C A 10 19.237 -4.689 -71.480 1.00 39.37 O
ATOM 5 O5' C A 10 20.309 -6.878 -72.125 1.00 47.42 O
ATOM 6 C5' C A 10 20.118 -8.087 -72.847 1.00 48.13 C
ATOM 7 C4' C A 10 21.165 -9.118 -72.504 1.00 47.08 C
ATOM 8 O4' C A 10 22.465 -8.688 -72.987 1.00 49.44 O
ATOM 9 C3' C A 10 21.398 -9.373 -71.024 1.00 46.39 C
ATOM 10 O3' C A 10 20.419 -10.213 -70.439 1.00 53.05 O
ATOM 11 C2' C A 10 22.799 -9.964 -71.013 1.00 43.45 C
ATOM 12 O2' C A 10 22.775 -11.322 -71.428 1.00 40.30 O
ATOM 13 C1' C A 10 23.475 -9.142 -72.107 1.00 42.81 C
ATOM 14 N1 C A 10 24.187 -7.973 -71.554 1.00 40.24 N
ATOM 15 C2 C A 10 25.489 -8.175 -71.098 1.00 41.60 C
ATOM 16 O2 C A 10 25.975 -9.312 -71.181 1.00 43.40 O
ATOM 17 N3 C A 10 26.178 -7.135 -70.581 1.00 38.49 N
ATOM 18 C4 C A 10 25.609 -5.932 -70.514 1.00 35.99 C
ATOM 19 N4 C A 10 26.336 -4.938 -69.996 1.00 36.86 N
ATOM 20 C5 C A 10 24.278 -5.696 -70.973 1.00 35.59 C
ATOM 21 C6 C A 10 23.608 -6.738 -71.480 1.00 39.08 C
ATOM 22 P U A 11 20.117 -10.115 -68.863 1.00 52.15 P
ATOM 23 OP1 U A 11 18.991 -11.033 -68.574 1.00 47.28 O
ATOM 24 OP2 U A 11 19.966 -8.676 -68.538 1.00 52.70 O
ATOM 25 O5' U A 11 21.454 -10.678 -68.211 1.00 39.76 O
TER
ATOM 1 O3' A B 37 25.368 4.215 -72.820 1.00 50.12 O
ATOM 2 P C B 38 25.053 4.157 -71.245 1.00 54.39 P
ATOM 3 OP1 C B 38 23.951 5.117 -70.984 1.00 49.37 O
ATOM 4 OP2 C B 38 26.343 4.341 -70.536 1.00 46.70 O
ATOM 5 O5' C B 38 24.532 2.667 -71.041 1.00 46.22 O
ATOM 6 C5' C B 38 23.332 2.220 -71.654 1.00 49.07 C
ATOM 7 C4' C B 38 23.291 0.716 -71.747 1.00 50.31 C
ATOM 8 O4' C B 38 24.421 0.248 -72.528 1.00 47.77 O
ATOM 9 C3' C B 38 23.411 -0.041 -70.429 1.00 48.48 C
ATOM 10 O3' C B 38 22.181 -0.141 -69.730 1.00 55.84 O
ATOM 11 C2' C B 38 23.966 -1.391 -70.868 1.00 46.93 C
ATOM 12 O2' C B 38 22.929 -2.219 -71.376 1.00 46.33 O
ATOM 13 C1' C B 38 24.875 -0.990 -72.029 1.00 44.33 C
ATOM 14 N1 C B 38 26.286 -0.846 -71.608 1.00 39.95 N
ATOM 15 C2 C B 38 27.154 -1.887 -71.941 1.00 36.56 C
ATOM 16 O2 C B 38 26.701 -2.861 -72.564 1.00 33.37 O
ATOM 17 N3 C B 38 28.453 -1.809 -71.579 1.00 37.15 N
ATOM 18 C4 C B 38 28.892 -0.741 -70.910 1.00 36.04 C
ATOM 19 N4 C B 38 30.183 -0.707 -70.573 1.00 37.76 N
ATOM 20 C5 C B 38 28.029 0.337 -70.556 1.00 36.21 C
ATOM 21 C6 C B 38 26.744 0.247 -70.922 1.00 39.29 C
ATOM 22 P C B 39 21.645 1.080 -68.831 1.00 52.42 P
ATOM 23 OP1 C B 39 22.622 2.187 -68.964 1.00 49.91 O
ATOM 24 OP2 C B 39 21.363 0.536 -67.479 1.00 52.44 O
ATOM 25 O5' C B 39 20.281 1.468 -69.554 1.00 60.94 O
TER
Atoms:
C2: (25.489,-8.175,-71.098)
OP1: (18.693,-5.780,-73.722)
OP2: (19.237,-4.689,-71.480)
C4: (25.609,-5.932,-70.514)
O5': (20.309,-6.878,-72.125)
C3': (21.398,-9.373,-71.024)
C1': (23.475,-9.142,-72.107)
O4': (22.465,-8.688,-72.987)
C5': (20.118,-8.087,-72.847)
P: (19.669,-5.509,-72.637)
O2: (25.975,-9.312,-71.181)
C4': (21.165,-9.118,-72.504)
C2': (22.799,-9.964,-71.013)
O2': (22.775,-11.322,-71.428)
N1: (24.187,-7.973,-71.554)
N3: (26.178,-7.135,-70.581)
N4: (26.336,-4.938,-69.996)
C6: (23.608,-6.738,-71.480)
C5: (24.278,-5.696,-70.973)
O3': (20.419,-10.213,-70.439)
OP1: (18.693,-5.780,-73.722)
OP2: (19.237,-4.689,-71.480)
C4: (25.609,-5.932,-70.514)
O5': (20.309,-6.878,-72.125)
C3': (21.398,-9.373,-71.024)
C1': (23.475,-9.142,-72.107)
O4': (22.465,-8.688,-72.987)
C5': (20.118,-8.087,-72.847)
P: (19.669,-5.509,-72.637)
O2: (25.975,-9.312,-71.181)
C4': (21.165,-9.118,-72.504)
C2': (22.799,-9.964,-71.013)
O2': (22.775,-11.322,-71.428)
N1: (24.187,-7.973,-71.554)
N3: (26.178,-7.135,-70.581)
N4: (26.336,-4.938,-69.996)
C6: (23.608,-6.738,-71.480)
C5: (24.278,-5.696,-70.973)
O3': (20.419,-10.213,-70.439)
C2: (27.154,-1.887,-71.941)
OP1: (23.951,5.117,-70.984)
OP2: (26.343,4.341,-70.536)
C4: (28.892,-0.741,-70.910)
O5': (24.532,2.667,-71.041)
C3': (23.411,-0.041,-70.429)
C1': (24.875,-0.990,-72.029)
O4': (24.421,0.248,-72.528)
C5': (23.332,2.220,-71.654)
P: (25.053,4.157,-71.245)
O2: (26.701,-2.861,-72.564)
C4': (23.291,0.716,-71.747)
C2': (23.966,-1.391,-70.868)
O2': (22.929,-2.219,-71.376)
N1: (26.286,-0.846,-71.608)
N3: (28.453,-1.809,-71.579)
N4: (30.183,-0.707,-70.573)
C6: (26.744,0.247,-70.922)
C5: (28.029,0.337,-70.556)
O3': (22.181,-0.141,-69.730)
OP1: (23.951,5.117,-70.984)
OP2: (26.343,4.341,-70.536)
C4: (28.892,-0.741,-70.910)
O5': (24.532,2.667,-71.041)
C3': (23.411,-0.041,-70.429)
C1': (24.875,-0.990,-72.029)
O4': (24.421,0.248,-72.528)
C5': (23.332,2.220,-71.654)
P: (25.053,4.157,-71.245)
O2: (26.701,-2.861,-72.564)
C4': (23.291,0.716,-71.747)
C2': (23.966,-1.391,-70.868)
O2': (22.929,-2.219,-71.376)
N1: (26.286,-0.846,-71.608)
N3: (28.453,-1.809,-71.579)
N4: (30.183,-0.707,-70.573)
C6: (26.744,0.247,-70.922)
C5: (28.029,0.337,-70.556)
O3': (22.181,-0.141,-69.730)
Image (generated by PyMOL):