Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKI:A39:A38
Extra
PDB:
ATOM 1 O3' C A 38 -5.962 -1.909 -47.598 1.00 17.89 O
ATOM 2 P C A 39 -6.312 -3.238 -46.784 1.00 20.89 P
ATOM 3 OP1 C A 39 -7.783 -3.350 -46.645 1.00 21.47 O
ATOM 4 OP2 C A 39 -5.441 -3.304 -45.589 1.00 21.03 O
ATOM 5 O5' C A 39 -5.750 -4.330 -47.798 1.00 20.62 O
ATOM 6 C5' C A 39 -6.168 -5.662 -47.799 1.00 20.28 C
ATOM 7 C4' C A 39 -5.363 -6.363 -48.869 1.00 19.36 C
ATOM 8 O4' C A 39 -5.126 -5.450 -49.971 1.00 19.18 O
ATOM 9 C3' C A 39 -3.961 -6.743 -48.448 1.00 18.93 C
ATOM 10 O3' C A 39 -3.990 -7.925 -47.649 1.00 19.30 O
ATOM 11 C2' C A 39 -3.303 -6.950 -49.806 1.00 18.88 C
ATOM 12 O2' C A 39 -3.645 -8.188 -50.411 1.00 20.07 O
ATOM 13 C1' C A 39 -3.905 -5.792 -50.606 1.00 18.58 C
ATOM 14 N1 C A 39 -3.011 -4.566 -50.735 1.00 17.63 N
ATOM 15 C2 C A 39 -1.845 -4.635 -51.516 1.00 17.48 C
ATOM 16 O2 C A 39 -1.553 -5.692 -52.088 1.00 18.27 O
ATOM 17 N3 C A 39 -1.057 -3.535 -51.626 1.00 17.20 N
ATOM 18 C4 C A 39 -1.389 -2.394 -51.010 1.00 16.82 C
ATOM 19 N4 C A 39 -0.574 -1.342 -51.167 1.00 16.33 N
ATOM 20 C5 C A 39 -2.573 -2.291 -50.213 1.00 16.85 C
ATOM 21 C6 C A 39 -3.345 -3.388 -50.106 1.00 16.99 C
ATOM 22 P U A 40 -2.985 -8.070 -46.415 1.00 18.77 P
ATOM 23 OP1 U A 40 -3.499 -9.134 -45.526 1.00 19.50 O
ATOM 24 OP2 U A 40 -2.719 -6.715 -45.864 1.00 18.09 O
ATOM 25 O5' U A 40 -1.671 -8.597 -47.146 1.00 18.65 O
TER
ATOM 1 O3' G B 37 -10.799 -3.778 -51.439 1.00 24.23 O
ATOM 2 P C B 38 -10.394 -3.806 -49.888 1.00 23.36 P
ATOM 3 OP1 C B 38 -9.882 -5.167 -49.601 1.00 25.09 O
ATOM 4 OP2 C B 38 -11.541 -3.293 -49.116 1.00 23.15 O
ATOM 5 O5' C B 38 -9.202 -2.736 -49.753 1.00 21.31 O
ATOM 6 C5' C B 38 -7.854 -3.049 -50.121 1.00 18.85 C
ATOM 7 C4' C B 38 -6.890 -1.886 -49.876 1.00 18.35 C
ATOM 8 O4' C B 38 -7.214 -0.783 -50.766 1.00 17.73 O
ATOM 9 C3' C B 38 -6.872 -1.258 -48.482 1.00 17.55 C
ATOM 10 O3' C B 38 -5.962 -1.909 -47.598 1.00 17.89 O
ATOM 11 C2' C B 38 -6.342 0.148 -48.788 1.00 15.41 C
ATOM 12 O2' C B 38 -4.934 0.179 -48.901 1.00 14.77 O
ATOM 13 C1' C B 38 -6.961 0.468 -50.140 1.00 14.47 C
ATOM 14 N1 C B 38 -8.238 1.270 -50.046 1.00 13.38 N
ATOM 15 C2 C B 38 -8.204 2.677 -49.901 1.00 12.23 C
ATOM 16 O2 C B 38 -7.118 3.285 -49.857 1.00 11.75 O
ATOM 17 N3 C B 38 -9.381 3.358 -49.816 1.00 12.07 N
ATOM 18 C4 C B 38 -10.544 2.705 -49.862 1.00 13.32 C
ATOM 19 N4 C B 38 -11.667 3.425 -49.775 1.00 12.72 N
ATOM 20 C5 C B 38 -10.607 1.280 -49.996 1.00 13.26 C
ATOM 21 C6 C B 38 -9.447 0.613 -50.085 1.00 13.15 C
ATOM 22 P C B 39 -6.312 -3.238 -46.784 1.00 20.89 P
ATOM 23 OP1 C B 39 -7.783 -3.350 -46.645 1.00 21.47 O
ATOM 24 OP2 C B 39 -5.441 -3.304 -45.589 1.00 21.03 O
ATOM 25 O5' C B 39 -5.750 -4.330 -47.798 1.00 20.62 O
TER
ATOM 2 P C A 39 -6.312 -3.238 -46.784 1.00 20.89 P
ATOM 3 OP1 C A 39 -7.783 -3.350 -46.645 1.00 21.47 O
ATOM 4 OP2 C A 39 -5.441 -3.304 -45.589 1.00 21.03 O
ATOM 5 O5' C A 39 -5.750 -4.330 -47.798 1.00 20.62 O
ATOM 6 C5' C A 39 -6.168 -5.662 -47.799 1.00 20.28 C
ATOM 7 C4' C A 39 -5.363 -6.363 -48.869 1.00 19.36 C
ATOM 8 O4' C A 39 -5.126 -5.450 -49.971 1.00 19.18 O
ATOM 9 C3' C A 39 -3.961 -6.743 -48.448 1.00 18.93 C
ATOM 10 O3' C A 39 -3.990 -7.925 -47.649 1.00 19.30 O
ATOM 11 C2' C A 39 -3.303 -6.950 -49.806 1.00 18.88 C
ATOM 12 O2' C A 39 -3.645 -8.188 -50.411 1.00 20.07 O
ATOM 13 C1' C A 39 -3.905 -5.792 -50.606 1.00 18.58 C
ATOM 14 N1 C A 39 -3.011 -4.566 -50.735 1.00 17.63 N
ATOM 15 C2 C A 39 -1.845 -4.635 -51.516 1.00 17.48 C
ATOM 16 O2 C A 39 -1.553 -5.692 -52.088 1.00 18.27 O
ATOM 17 N3 C A 39 -1.057 -3.535 -51.626 1.00 17.20 N
ATOM 18 C4 C A 39 -1.389 -2.394 -51.010 1.00 16.82 C
ATOM 19 N4 C A 39 -0.574 -1.342 -51.167 1.00 16.33 N
ATOM 20 C5 C A 39 -2.573 -2.291 -50.213 1.00 16.85 C
ATOM 21 C6 C A 39 -3.345 -3.388 -50.106 1.00 16.99 C
ATOM 22 P U A 40 -2.985 -8.070 -46.415 1.00 18.77 P
ATOM 23 OP1 U A 40 -3.499 -9.134 -45.526 1.00 19.50 O
ATOM 24 OP2 U A 40 -2.719 -6.715 -45.864 1.00 18.09 O
ATOM 25 O5' U A 40 -1.671 -8.597 -47.146 1.00 18.65 O
TER
ATOM 1 O3' G B 37 -10.799 -3.778 -51.439 1.00 24.23 O
ATOM 2 P C B 38 -10.394 -3.806 -49.888 1.00 23.36 P
ATOM 3 OP1 C B 38 -9.882 -5.167 -49.601 1.00 25.09 O
ATOM 4 OP2 C B 38 -11.541 -3.293 -49.116 1.00 23.15 O
ATOM 5 O5' C B 38 -9.202 -2.736 -49.753 1.00 21.31 O
ATOM 6 C5' C B 38 -7.854 -3.049 -50.121 1.00 18.85 C
ATOM 7 C4' C B 38 -6.890 -1.886 -49.876 1.00 18.35 C
ATOM 8 O4' C B 38 -7.214 -0.783 -50.766 1.00 17.73 O
ATOM 9 C3' C B 38 -6.872 -1.258 -48.482 1.00 17.55 C
ATOM 10 O3' C B 38 -5.962 -1.909 -47.598 1.00 17.89 O
ATOM 11 C2' C B 38 -6.342 0.148 -48.788 1.00 15.41 C
ATOM 12 O2' C B 38 -4.934 0.179 -48.901 1.00 14.77 O
ATOM 13 C1' C B 38 -6.961 0.468 -50.140 1.00 14.47 C
ATOM 14 N1 C B 38 -8.238 1.270 -50.046 1.00 13.38 N
ATOM 15 C2 C B 38 -8.204 2.677 -49.901 1.00 12.23 C
ATOM 16 O2 C B 38 -7.118 3.285 -49.857 1.00 11.75 O
ATOM 17 N3 C B 38 -9.381 3.358 -49.816 1.00 12.07 N
ATOM 18 C4 C B 38 -10.544 2.705 -49.862 1.00 13.32 C
ATOM 19 N4 C B 38 -11.667 3.425 -49.775 1.00 12.72 N
ATOM 20 C5 C B 38 -10.607 1.280 -49.996 1.00 13.26 C
ATOM 21 C6 C B 38 -9.447 0.613 -50.085 1.00 13.15 C
ATOM 22 P C B 39 -6.312 -3.238 -46.784 1.00 20.89 P
ATOM 23 OP1 C B 39 -7.783 -3.350 -46.645 1.00 21.47 O
ATOM 24 OP2 C B 39 -5.441 -3.304 -45.589 1.00 21.03 O
ATOM 25 O5' C B 39 -5.750 -4.330 -47.798 1.00 20.62 O
TER
Atoms:
C2: (-1.845,-4.635,-51.516)
OP1: (-7.783,-3.350,-46.645)
OP2: (-5.441,-3.304,-45.589)
C4: (-1.389,-2.394,-51.010)
O5': (-5.750,-4.330,-47.798)
C3': (-3.961,-6.743,-48.448)
C1': (-3.905,-5.792,-50.606)
O4': (-5.126,-5.450,-49.971)
C5': (-6.168,-5.662,-47.799)
P: (-6.312,-3.238,-46.784)
O2: (-1.553,-5.692,-52.088)
C4': (-5.363,-6.363,-48.869)
C2': (-3.303,-6.950,-49.806)
O2': (-3.645,-8.188,-50.411)
N1: (-3.011,-4.566,-50.735)
N3: (-1.057,-3.535,-51.626)
N4: (-0.574,-1.342,-51.167)
C6: (-3.345,-3.388,-50.106)
C5: (-2.573,-2.291,-50.213)
O3': (-3.990,-7.925,-47.649)
OP1: (-7.783,-3.350,-46.645)
OP2: (-5.441,-3.304,-45.589)
C4: (-1.389,-2.394,-51.010)
O5': (-5.750,-4.330,-47.798)
C3': (-3.961,-6.743,-48.448)
C1': (-3.905,-5.792,-50.606)
O4': (-5.126,-5.450,-49.971)
C5': (-6.168,-5.662,-47.799)
P: (-6.312,-3.238,-46.784)
O2: (-1.553,-5.692,-52.088)
C4': (-5.363,-6.363,-48.869)
C2': (-3.303,-6.950,-49.806)
O2': (-3.645,-8.188,-50.411)
N1: (-3.011,-4.566,-50.735)
N3: (-1.057,-3.535,-51.626)
N4: (-0.574,-1.342,-51.167)
C6: (-3.345,-3.388,-50.106)
C5: (-2.573,-2.291,-50.213)
O3': (-3.990,-7.925,-47.649)
C2: (-8.204,2.677,-49.901)
OP1: (-9.882,-5.167,-49.601)
OP2: (-11.541,-3.293,-49.116)
C4: (-10.544,2.705,-49.862)
O5': (-9.202,-2.736,-49.753)
C3': (-6.872,-1.258,-48.482)
C1': (-6.961,0.468,-50.140)
O4': (-7.214,-0.783,-50.766)
C5': (-7.854,-3.049,-50.121)
P: (-10.394,-3.806,-49.888)
O2: (-7.118,3.285,-49.857)
C4': (-6.890,-1.886,-49.876)
C2': (-6.342,0.148,-48.788)
O2': (-4.934,0.179,-48.901)
N1: (-8.238,1.270,-50.046)
N3: (-9.381,3.358,-49.816)
N4: (-11.667,3.425,-49.775)
C6: (-9.447,0.613,-50.085)
C5: (-10.607,1.280,-49.996)
O3': (-5.962,-1.909,-47.598)
OP1: (-9.882,-5.167,-49.601)
OP2: (-11.541,-3.293,-49.116)
C4: (-10.544,2.705,-49.862)
O5': (-9.202,-2.736,-49.753)
C3': (-6.872,-1.258,-48.482)
C1': (-6.961,0.468,-50.140)
O4': (-7.214,-0.783,-50.766)
C5': (-7.854,-3.049,-50.121)
P: (-10.394,-3.806,-49.888)
O2: (-7.118,3.285,-49.857)
C4': (-6.890,-1.886,-49.876)
C2': (-6.342,0.148,-48.788)
O2': (-4.934,0.179,-48.901)
N1: (-8.238,1.270,-50.046)
N3: (-9.381,3.358,-49.816)
N4: (-11.667,3.425,-49.775)
C6: (-9.447,0.613,-50.085)
C5: (-10.607,1.280,-49.996)
O3': (-5.962,-1.909,-47.598)
Image (generated by PyMOL):