Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:B39:B38
Extra
PDB:
ATOM 1 O3' C A 38 6.427 -3.579 1.343 1.00 65.42 O
ATOM 2 P C A 39 7.375 -4.455 0.384 1.00 72.42 P
ATOM 3 OP1 C A 39 8.777 -4.159 0.761 1.00 71.98 O
ATOM 4 OP2 C A 39 6.944 -4.192 -1.003 1.00 69.94 O
ATOM 5 O5' C A 39 7.019 -5.948 0.795 1.00 76.50 O
ATOM 6 C5' C A 39 5.683 -6.421 0.765 1.00 70.35 C
ATOM 7 C4' C A 39 5.452 -7.451 1.837 1.00 66.95 C
ATOM 8 O4' C A 39 5.435 -6.799 3.135 1.00 61.88 O
ATOM 9 C3' C A 39 4.129 -8.197 1.772 1.00 64.84 C
ATOM 10 O3' C A 39 4.152 -9.295 0.872 1.00 64.71 O
ATOM 11 C2' C A 39 3.909 -8.594 3.222 1.00 60.67 C
ATOM 12 O2' C A 39 4.756 -9.683 3.577 1.00 52.57 O
ATOM 13 C1' C A 39 4.417 -7.346 3.933 1.00 64.56 C
ATOM 14 N1 C A 39 3.364 -6.321 4.084 1.00 70.73 N
ATOM 15 C2 C A 39 2.192 -6.593 4.797 1.00 78.67 C
ATOM 16 O2 C A 39 2.048 -7.724 5.278 1.00 87.04 O
ATOM 17 N3 C A 39 1.245 -5.630 4.940 1.00 72.54 N
ATOM 18 C4 C A 39 1.442 -4.431 4.405 1.00 71.10 C
ATOM 19 N4 C A 39 0.491 -3.516 4.561 1.00 37.80 N
ATOM 20 C5 C A 39 2.629 -4.121 3.683 1.00 69.80 C
ATOM 21 C6 C A 39 3.556 -5.081 3.553 1.00 67.98 C
ATOM 22 P U A 40 2.786 -9.823 0.200 1.00 75.69 P
ATOM 23 OP1 U A 40 3.136 -11.001 -0.629 1.00 75.25 O
ATOM 24 OP2 U A 40 2.140 -8.664 -0.451 1.00 63.23 O
ATOM 25 O5' U A 40 1.919 -10.286 1.458 1.00 92.41 O
TER
ATOM 1 O3' G B 37 10.544 -4.948 5.655 1.00 74.40 O
ATOM 2 P C B 38 10.459 -4.904 4.050 1.00 71.24 P
ATOM 3 OP1 C B 38 10.145 -6.278 3.586 1.00 72.02 O
ATOM 4 OP2 C B 38 11.705 -4.253 3.567 1.00 59.28 O
ATOM 5 O5' C B 38 9.208 -3.954 3.798 1.00 60.86 O
ATOM 6 C5' C B 38 7.891 -4.398 4.089 1.00 60.90 C
ATOM 7 C4' C B 38 6.875 -3.352 3.734 1.00 56.19 C
ATOM 8 O4' C B 38 7.043 -2.210 4.606 1.00 55.65 O
ATOM 9 C3' C B 38 7.005 -2.766 2.346 1.00 58.80 C
ATOM 10 O3' C B 38 6.427 -3.579 1.343 1.00 65.42 O
ATOM 11 C2' C B 38 6.356 -1.399 2.499 1.00 55.46 C
ATOM 12 O2' C B 38 4.947 -1.509 2.530 1.00 53.80 O
ATOM 13 C1' C B 38 6.817 -1.019 3.891 1.00 52.39 C
ATOM 14 N1 C B 38 8.059 -0.254 3.869 1.00 50.91 N
ATOM 15 C2 C B 38 7.951 1.095 3.588 1.00 54.93 C
ATOM 16 O2 C B 38 6.815 1.525 3.357 1.00 58.00 O
ATOM 17 N3 C B 38 9.067 1.862 3.573 1.00 54.44 N
ATOM 18 C4 C B 38 10.258 1.304 3.849 1.00 55.61 C
ATOM 19 N4 C B 38 11.356 2.081 3.846 1.00 32.42 N
ATOM 20 C5 C B 38 10.377 -0.090 4.145 1.00 52.33 C
ATOM 21 C6 C B 38 9.260 -0.830 4.149 1.00 49.49 C
ATOM 22 P C B 39 7.375 -4.455 0.384 1.00 72.42 P
ATOM 23 OP1 C B 39 8.777 -4.159 0.761 1.00 71.98 O
ATOM 24 OP2 C B 39 6.944 -4.192 -1.003 1.00 69.94 O
ATOM 25 O5' C B 39 7.019 -5.948 0.795 1.00 76.50 O
TER
ATOM 2 P C A 39 7.375 -4.455 0.384 1.00 72.42 P
ATOM 3 OP1 C A 39 8.777 -4.159 0.761 1.00 71.98 O
ATOM 4 OP2 C A 39 6.944 -4.192 -1.003 1.00 69.94 O
ATOM 5 O5' C A 39 7.019 -5.948 0.795 1.00 76.50 O
ATOM 6 C5' C A 39 5.683 -6.421 0.765 1.00 70.35 C
ATOM 7 C4' C A 39 5.452 -7.451 1.837 1.00 66.95 C
ATOM 8 O4' C A 39 5.435 -6.799 3.135 1.00 61.88 O
ATOM 9 C3' C A 39 4.129 -8.197 1.772 1.00 64.84 C
ATOM 10 O3' C A 39 4.152 -9.295 0.872 1.00 64.71 O
ATOM 11 C2' C A 39 3.909 -8.594 3.222 1.00 60.67 C
ATOM 12 O2' C A 39 4.756 -9.683 3.577 1.00 52.57 O
ATOM 13 C1' C A 39 4.417 -7.346 3.933 1.00 64.56 C
ATOM 14 N1 C A 39 3.364 -6.321 4.084 1.00 70.73 N
ATOM 15 C2 C A 39 2.192 -6.593 4.797 1.00 78.67 C
ATOM 16 O2 C A 39 2.048 -7.724 5.278 1.00 87.04 O
ATOM 17 N3 C A 39 1.245 -5.630 4.940 1.00 72.54 N
ATOM 18 C4 C A 39 1.442 -4.431 4.405 1.00 71.10 C
ATOM 19 N4 C A 39 0.491 -3.516 4.561 1.00 37.80 N
ATOM 20 C5 C A 39 2.629 -4.121 3.683 1.00 69.80 C
ATOM 21 C6 C A 39 3.556 -5.081 3.553 1.00 67.98 C
ATOM 22 P U A 40 2.786 -9.823 0.200 1.00 75.69 P
ATOM 23 OP1 U A 40 3.136 -11.001 -0.629 1.00 75.25 O
ATOM 24 OP2 U A 40 2.140 -8.664 -0.451 1.00 63.23 O
ATOM 25 O5' U A 40 1.919 -10.286 1.458 1.00 92.41 O
TER
ATOM 1 O3' G B 37 10.544 -4.948 5.655 1.00 74.40 O
ATOM 2 P C B 38 10.459 -4.904 4.050 1.00 71.24 P
ATOM 3 OP1 C B 38 10.145 -6.278 3.586 1.00 72.02 O
ATOM 4 OP2 C B 38 11.705 -4.253 3.567 1.00 59.28 O
ATOM 5 O5' C B 38 9.208 -3.954 3.798 1.00 60.86 O
ATOM 6 C5' C B 38 7.891 -4.398 4.089 1.00 60.90 C
ATOM 7 C4' C B 38 6.875 -3.352 3.734 1.00 56.19 C
ATOM 8 O4' C B 38 7.043 -2.210 4.606 1.00 55.65 O
ATOM 9 C3' C B 38 7.005 -2.766 2.346 1.00 58.80 C
ATOM 10 O3' C B 38 6.427 -3.579 1.343 1.00 65.42 O
ATOM 11 C2' C B 38 6.356 -1.399 2.499 1.00 55.46 C
ATOM 12 O2' C B 38 4.947 -1.509 2.530 1.00 53.80 O
ATOM 13 C1' C B 38 6.817 -1.019 3.891 1.00 52.39 C
ATOM 14 N1 C B 38 8.059 -0.254 3.869 1.00 50.91 N
ATOM 15 C2 C B 38 7.951 1.095 3.588 1.00 54.93 C
ATOM 16 O2 C B 38 6.815 1.525 3.357 1.00 58.00 O
ATOM 17 N3 C B 38 9.067 1.862 3.573 1.00 54.44 N
ATOM 18 C4 C B 38 10.258 1.304 3.849 1.00 55.61 C
ATOM 19 N4 C B 38 11.356 2.081 3.846 1.00 32.42 N
ATOM 20 C5 C B 38 10.377 -0.090 4.145 1.00 52.33 C
ATOM 21 C6 C B 38 9.260 -0.830 4.149 1.00 49.49 C
ATOM 22 P C B 39 7.375 -4.455 0.384 1.00 72.42 P
ATOM 23 OP1 C B 39 8.777 -4.159 0.761 1.00 71.98 O
ATOM 24 OP2 C B 39 6.944 -4.192 -1.003 1.00 69.94 O
ATOM 25 O5' C B 39 7.019 -5.948 0.795 1.00 76.50 O
TER
Atoms:
C2: (2.192,-6.593,4.797)
OP1: (8.777,-4.159,0.761)
OP2: (6.944,-4.192,-1.003)
C4: (1.442,-4.431,4.405)
O5': (7.019,-5.948,0.795)
C3': (4.129,-8.197,1.772)
C1': (4.417,-7.346,3.933)
O4': (5.435,-6.799,3.135)
C5': (5.683,-6.421,0.765)
P: (7.375,-4.455,0.384)
O2: (2.048,-7.724,5.278)
C4': (5.452,-7.451,1.837)
C2': (3.909,-8.594,3.222)
O2': (4.756,-9.683,3.577)
N1: (3.364,-6.321,4.084)
N3: (1.245,-5.630,4.940)
N4: (0.491,-3.516,4.561)
C6: (3.556,-5.081,3.553)
C5: (2.629,-4.121,3.683)
O3': (4.152,-9.295,0.872)
OP1: (8.777,-4.159,0.761)
OP2: (6.944,-4.192,-1.003)
C4: (1.442,-4.431,4.405)
O5': (7.019,-5.948,0.795)
C3': (4.129,-8.197,1.772)
C1': (4.417,-7.346,3.933)
O4': (5.435,-6.799,3.135)
C5': (5.683,-6.421,0.765)
P: (7.375,-4.455,0.384)
O2: (2.048,-7.724,5.278)
C4': (5.452,-7.451,1.837)
C2': (3.909,-8.594,3.222)
O2': (4.756,-9.683,3.577)
N1: (3.364,-6.321,4.084)
N3: (1.245,-5.630,4.940)
N4: (0.491,-3.516,4.561)
C6: (3.556,-5.081,3.553)
C5: (2.629,-4.121,3.683)
O3': (4.152,-9.295,0.872)
C2: (7.951,1.095,3.588)
OP1: (10.145,-6.278,3.586)
OP2: (11.705,-4.253,3.567)
C4: (10.258,1.304,3.849)
O5': (9.208,-3.954,3.798)
C3': (7.005,-2.766,2.346)
C1': (6.817,-1.019,3.891)
O4': (7.043,-2.210,4.606)
C5': (7.891,-4.398,4.089)
P: (10.459,-4.904,4.050)
O2: (6.815,1.525,3.357)
C4': (6.875,-3.352,3.734)
C2': (6.356,-1.399,2.499)
O2': (4.947,-1.509,2.530)
N1: (8.059,-0.254,3.869)
N3: (9.067,1.862,3.573)
N4: (11.356,2.081,3.846)
C6: (9.260,-0.830,4.149)
C5: (10.377,-0.090,4.145)
O3': (6.427,-3.579,1.343)
OP1: (10.145,-6.278,3.586)
OP2: (11.705,-4.253,3.567)
C4: (10.258,1.304,3.849)
O5': (9.208,-3.954,3.798)
C3': (7.005,-2.766,2.346)
C1': (6.817,-1.019,3.891)
O4': (7.043,-2.210,4.606)
C5': (7.891,-4.398,4.089)
P: (10.459,-4.904,4.050)
O2: (6.815,1.525,3.357)
C4': (6.875,-3.352,3.734)
C2': (6.356,-1.399,2.499)
O2': (4.947,-1.509,2.530)
N1: (8.059,-0.254,3.869)
N3: (9.067,1.862,3.573)
N4: (11.356,2.081,3.846)
C6: (9.260,-0.830,4.149)
C5: (10.377,-0.090,4.145)
O3': (6.427,-3.579,1.343)
Image (generated by PyMOL):