Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11717:11637
Extra
PDB:
ATOM 1 O3' U A1716 22.069 67.447 132.148 1.00 83.02 O
ATOM 2 P C A1717 21.541 66.327 133.175 1.00 90.63 P
ATOM 3 OP1 C A1717 22.622 66.125 134.178 1.00 90.89 O
ATOM 4 OP2 C A1717 21.077 65.166 132.371 1.00 89.73 O
ATOM 5 O5' C A1717 20.276 67.031 133.844 1.00 91.37 O
ATOM 6 C5' C A1717 20.411 68.201 134.632 1.00 92.31 C
ATOM 7 C4' C A1717 19.305 69.195 134.358 1.00 92.79 C
ATOM 8 O4' C A1717 19.656 70.018 133.217 1.00 92.69 O
ATOM 9 C3' C A1717 17.933 68.633 133.973 1.00 92.45 C
ATOM 10 O3' C A1717 17.185 68.122 135.064 1.00 92.74 O
ATOM 11 C2' C A1717 17.285 69.838 133.313 1.00 92.85 C
ATOM 12 O2' C A1717 16.881 70.789 134.289 1.00 93.82 O
ATOM 13 C1' C A1717 18.471 70.413 132.541 1.00 92.70 C
ATOM 14 N1 C A1717 18.516 69.891 131.177 1.00 91.84 N
ATOM 15 C2 C A1717 17.652 70.462 130.235 1.00 91.82 C
ATOM 16 O2 C A1717 16.894 71.394 130.549 1.00 92.52 O
ATOM 17 N3 C A1717 17.678 69.976 128.978 1.00 91.04 N
ATOM 18 C4 C A1717 18.513 68.976 128.683 1.00 90.32 C
ATOM 19 N4 C A1717 18.503 68.536 127.424 1.00 89.59 N
ATOM 20 C5 C A1717 19.391 68.367 129.633 1.00 90.32 C
ATOM 21 C6 C A1717 19.353 68.854 130.871 1.00 91.10 C
ATOM 22 P C A1718 15.918 67.150 134.792 1.00 90.99 P
ATOM 23 OP1 C A1718 15.335 66.802 136.121 1.00 91.47 O
ATOM 24 OP2 C A1718 16.385 66.045 133.902 1.00 89.99 O
ATOM 25 O5' C A1718 14.910 68.086 133.999 1.00 91.22 O
TER
ATOM 1 O3' U B1636 25.802 63.138 123.883 1.00 76.17 O
ATOM 2 P C B1637 24.512 62.301 124.333 1.00 72.11 P
ATOM 3 OP1 C B1637 25.010 61.071 124.990 1.00 71.75 O
ATOM 4 OP2 C B1637 23.635 62.184 123.134 1.00 71.66 O
ATOM 5 O5' C B1637 23.818 63.248 125.415 1.00 73.02 O
ATOM 6 C5' C B1637 24.391 63.429 126.702 1.00 73.58 C
ATOM 7 C4' C B1637 23.642 64.463 127.509 1.00 74.45 C
ATOM 8 O4' C B1637 23.789 65.769 126.900 1.00 74.84 O
ATOM 9 C3' C B1637 22.134 64.283 127.603 1.00 74.51 C
ATOM 10 O3' C B1637 21.737 63.290 128.530 1.00 74.43 O
ATOM 11 C2' C B1637 21.661 65.677 127.972 1.00 75.38 C
ATOM 12 O2' C B1637 21.812 65.916 129.359 1.00 76.05 O
ATOM 13 C1' C B1637 22.651 66.555 127.190 1.00 75.43 C
ATOM 14 N1 C B1637 22.040 67.011 125.938 1.00 75.20 N
ATOM 15 C2 C B1637 21.332 68.215 126.013 1.00 75.90 C
ATOM 16 O2 C B1637 21.374 68.859 127.081 1.00 76.65 O
ATOM 17 N3 C B1637 20.648 68.661 124.928 1.00 75.76 N
ATOM 18 C4 C B1637 20.629 67.943 123.808 1.00 74.97 C
ATOM 19 N4 C B1637 19.953 68.426 122.756 1.00 74.88 N
ATOM 20 C5 C B1637 21.324 66.695 123.736 1.00 74.25 C
ATOM 21 C6 C B1637 21.991 66.244 124.811 1.00 74.38 C
ATOM 22 P U B1638 20.428 62.396 128.246 1.00 77.31 P
ATOM 23 OP1 U B1638 20.148 62.469 126.780 1.00 76.78 O
ATOM 24 OP2 U B1638 19.376 62.850 129.205 1.00 78.00 O
ATOM 25 O5' U B1638 20.914 60.928 128.631 1.00 76.74 O
TER
ATOM 2 P C A1717 21.541 66.327 133.175 1.00 90.63 P
ATOM 3 OP1 C A1717 22.622 66.125 134.178 1.00 90.89 O
ATOM 4 OP2 C A1717 21.077 65.166 132.371 1.00 89.73 O
ATOM 5 O5' C A1717 20.276 67.031 133.844 1.00 91.37 O
ATOM 6 C5' C A1717 20.411 68.201 134.632 1.00 92.31 C
ATOM 7 C4' C A1717 19.305 69.195 134.358 1.00 92.79 C
ATOM 8 O4' C A1717 19.656 70.018 133.217 1.00 92.69 O
ATOM 9 C3' C A1717 17.933 68.633 133.973 1.00 92.45 C
ATOM 10 O3' C A1717 17.185 68.122 135.064 1.00 92.74 O
ATOM 11 C2' C A1717 17.285 69.838 133.313 1.00 92.85 C
ATOM 12 O2' C A1717 16.881 70.789 134.289 1.00 93.82 O
ATOM 13 C1' C A1717 18.471 70.413 132.541 1.00 92.70 C
ATOM 14 N1 C A1717 18.516 69.891 131.177 1.00 91.84 N
ATOM 15 C2 C A1717 17.652 70.462 130.235 1.00 91.82 C
ATOM 16 O2 C A1717 16.894 71.394 130.549 1.00 92.52 O
ATOM 17 N3 C A1717 17.678 69.976 128.978 1.00 91.04 N
ATOM 18 C4 C A1717 18.513 68.976 128.683 1.00 90.32 C
ATOM 19 N4 C A1717 18.503 68.536 127.424 1.00 89.59 N
ATOM 20 C5 C A1717 19.391 68.367 129.633 1.00 90.32 C
ATOM 21 C6 C A1717 19.353 68.854 130.871 1.00 91.10 C
ATOM 22 P C A1718 15.918 67.150 134.792 1.00 90.99 P
ATOM 23 OP1 C A1718 15.335 66.802 136.121 1.00 91.47 O
ATOM 24 OP2 C A1718 16.385 66.045 133.902 1.00 89.99 O
ATOM 25 O5' C A1718 14.910 68.086 133.999 1.00 91.22 O
TER
ATOM 1 O3' U B1636 25.802 63.138 123.883 1.00 76.17 O
ATOM 2 P C B1637 24.512 62.301 124.333 1.00 72.11 P
ATOM 3 OP1 C B1637 25.010 61.071 124.990 1.00 71.75 O
ATOM 4 OP2 C B1637 23.635 62.184 123.134 1.00 71.66 O
ATOM 5 O5' C B1637 23.818 63.248 125.415 1.00 73.02 O
ATOM 6 C5' C B1637 24.391 63.429 126.702 1.00 73.58 C
ATOM 7 C4' C B1637 23.642 64.463 127.509 1.00 74.45 C
ATOM 8 O4' C B1637 23.789 65.769 126.900 1.00 74.84 O
ATOM 9 C3' C B1637 22.134 64.283 127.603 1.00 74.51 C
ATOM 10 O3' C B1637 21.737 63.290 128.530 1.00 74.43 O
ATOM 11 C2' C B1637 21.661 65.677 127.972 1.00 75.38 C
ATOM 12 O2' C B1637 21.812 65.916 129.359 1.00 76.05 O
ATOM 13 C1' C B1637 22.651 66.555 127.190 1.00 75.43 C
ATOM 14 N1 C B1637 22.040 67.011 125.938 1.00 75.20 N
ATOM 15 C2 C B1637 21.332 68.215 126.013 1.00 75.90 C
ATOM 16 O2 C B1637 21.374 68.859 127.081 1.00 76.65 O
ATOM 17 N3 C B1637 20.648 68.661 124.928 1.00 75.76 N
ATOM 18 C4 C B1637 20.629 67.943 123.808 1.00 74.97 C
ATOM 19 N4 C B1637 19.953 68.426 122.756 1.00 74.88 N
ATOM 20 C5 C B1637 21.324 66.695 123.736 1.00 74.25 C
ATOM 21 C6 C B1637 21.991 66.244 124.811 1.00 74.38 C
ATOM 22 P U B1638 20.428 62.396 128.246 1.00 77.31 P
ATOM 23 OP1 U B1638 20.148 62.469 126.780 1.00 76.78 O
ATOM 24 OP2 U B1638 19.376 62.850 129.205 1.00 78.00 O
ATOM 25 O5' U B1638 20.914 60.928 128.631 1.00 76.74 O
TER
Atoms:
C2: (17.652,70.462,130.235)
OP1: (22.622,66.125,134.178)
OP2: (21.077,65.166,132.371)
C4: (18.513,68.976,128.683)
O5': (20.276,67.031,133.844)
C3': (17.933,68.633,133.973)
C1': (18.471,70.413,132.541)
O4': (19.656,70.018,133.217)
C5': (20.411,68.201,134.632)
P: (21.541,66.327,133.175)
O2: (16.894,71.394,130.549)
C4': (19.305,69.195,134.358)
C2': (17.285,69.838,133.313)
O2': (16.881,70.789,134.289)
N1: (18.516,69.891,131.177)
N3: (17.678,69.976,128.978)
N4: (18.503,68.536,127.424)
C6: (19.353,68.854,130.871)
C5: (19.391,68.367,129.633)
O3': (17.185,68.122,135.064)
OP1: (22.622,66.125,134.178)
OP2: (21.077,65.166,132.371)
C4: (18.513,68.976,128.683)
O5': (20.276,67.031,133.844)
C3': (17.933,68.633,133.973)
C1': (18.471,70.413,132.541)
O4': (19.656,70.018,133.217)
C5': (20.411,68.201,134.632)
P: (21.541,66.327,133.175)
O2: (16.894,71.394,130.549)
C4': (19.305,69.195,134.358)
C2': (17.285,69.838,133.313)
O2': (16.881,70.789,134.289)
N1: (18.516,69.891,131.177)
N3: (17.678,69.976,128.978)
N4: (18.503,68.536,127.424)
C6: (19.353,68.854,130.871)
C5: (19.391,68.367,129.633)
O3': (17.185,68.122,135.064)
C2: (21.332,68.215,126.013)
OP1: (25.010,61.071,124.990)
OP2: (23.635,62.184,123.134)
C4: (20.629,67.943,123.808)
O5': (23.818,63.248,125.415)
C3': (22.134,64.283,127.603)
C1': (22.651,66.555,127.190)
O4': (23.789,65.769,126.900)
C5': (24.391,63.429,126.702)
P: (24.512,62.301,124.333)
O2: (21.374,68.859,127.081)
C4': (23.642,64.463,127.509)
C2': (21.661,65.677,127.972)
O2': (21.812,65.916,129.359)
N1: (22.040,67.011,125.938)
N3: (20.648,68.661,124.928)
N4: (19.953,68.426,122.756)
C6: (21.991,66.244,124.811)
C5: (21.324,66.695,123.736)
O3': (21.737,63.290,128.530)
OP1: (25.010,61.071,124.990)
OP2: (23.635,62.184,123.134)
C4: (20.629,67.943,123.808)
O5': (23.818,63.248,125.415)
C3': (22.134,64.283,127.603)
C1': (22.651,66.555,127.190)
O4': (23.789,65.769,126.900)
C5': (24.391,63.429,126.702)
P: (24.512,62.301,124.333)
O2: (21.374,68.859,127.081)
C4': (23.642,64.463,127.509)
C2': (21.661,65.677,127.972)
O2': (21.812,65.916,129.359)
N1: (22.040,67.011,125.938)
N3: (20.648,68.661,124.928)
N4: (19.953,68.426,122.756)
C6: (21.991,66.244,124.811)
C5: (21.324,66.695,123.736)
O3': (21.737,63.290,128.530)
Image (generated by PyMOL):