Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8W:B14:B12
Extra
PDB:
ATOM 1 O3' U A 13 2.079 6.539 41.682 1.00 26.12 O
ATOM 2 P C A 14 1.688 7.788 42.620 1.00 24.53 P
ATOM 3 OP1 C A 14 0.554 8.454 41.944 1.00 27.41 O
ATOM 4 OP2 C A 14 2.921 8.564 42.916 1.00 22.25 O
ATOM 5 O5' C A 14 1.162 7.122 43.974 1.00 22.61 O
ATOM 6 C5' C A 14 0.053 6.221 43.954 1.00 24.46 C
ATOM 7 C4' C A 14 -0.301 5.721 45.350 1.00 26.18 C
ATOM 8 O4' C A 14 0.751 4.866 45.877 1.00 25.97 O
ATOM 9 C3' C A 14 -0.425 6.881 46.340 1.00 26.16 C
ATOM 10 O3' C A 14 -1.561 6.737 47.189 1.00 26.02 O
ATOM 11 C2' C A 14 0.900 6.924 47.101 1.00 24.85 C
ATOM 12 O2' C A 14 0.739 7.251 48.463 1.00 25.78 O
ATOM 13 C1' C A 14 1.324 5.460 47.022 1.00 27.77 C
ATOM 14 N1 C A 14 2.735 5.076 47.172 1.00 28.44 N
ATOM 15 C2 C A 14 3.063 4.165 48.188 1.00 34.79 C
ATOM 16 O2 C A 14 2.154 3.706 48.897 1.00 33.70 O
ATOM 17 N3 C A 14 4.354 3.809 48.370 1.00 33.62 N
ATOM 18 C4 C A 14 5.300 4.324 47.584 1.00 36.29 C
ATOM 19 N4 C A 14 6.564 3.946 47.798 1.00 40.18 N
ATOM 20 C5 C A 14 4.994 5.248 46.540 1.00 36.02 C
ATOM 21 C6 C A 14 3.709 5.590 46.369 1.00 33.12 C
ATOM 22 P C A 15 -2.920 7.515 46.870 1.00 25.84 P
ATOM 23 OP1 C A 15 -3.962 6.928 47.753 1.00 27.92 O
ATOM 24 OP2 C A 15 -3.122 7.534 45.397 1.00 26.40 O
ATOM 25 O5' C A 15 -2.638 8.995 47.365 1.00 22.88 O
TER
ATOM 1 O3' G B 11 11.325 7.033 47.308 1.00 22.12 O
ATOM 2 P A B 12 10.090 6.935 48.323 1.00 25.29 P
ATOM 3 OP1 A B 12 10.566 6.990 49.730 1.00 28.04 O
ATOM 4 OP2 A B 12 9.310 5.765 47.856 1.00 23.03 O
ATOM 5 O5' A B 12 9.227 8.234 48.001 1.00 21.52 O
ATOM 6 C5' A B 12 8.764 8.476 46.675 1.00 19.24 C
ATOM 7 C4' A B 12 7.258 8.367 46.618 1.00 20.51 C
ATOM 8 O4' A B 12 6.643 9.463 47.320 1.00 21.87 O
ATOM 9 C3' A B 12 6.659 8.435 45.224 1.00 24.64 C
ATOM 10 O3' A B 12 6.618 7.091 44.751 1.00 32.93 O
ATOM 11 C2' A B 12 5.246 9.009 45.439 1.00 23.83 C
ATOM 12 O2' A B 12 4.180 8.086 45.388 1.00 25.16 O
ATOM 13 C1' A B 12 5.322 9.596 46.852 1.00 21.46 C
ATOM 14 N9 A B 12 4.880 10.976 47.023 1.00 21.96 N
ATOM 15 C8 A B 12 5.338 12.120 46.422 1.00 21.43 C
ATOM 16 N7 A B 12 4.733 13.211 46.835 1.00 22.36 N
ATOM 17 C5 A B 12 3.811 12.751 47.765 1.00 19.23 C
ATOM 18 C6 A B 12 2.864 13.411 48.573 1.00 20.71 C
ATOM 19 N6 A B 12 2.686 14.734 48.578 1.00 18.63 N
ATOM 20 N1 A B 12 2.100 12.654 49.391 1.00 18.99 N
ATOM 21 C2 A B 12 2.284 11.329 49.393 1.00 21.04 C
ATOM 22 N3 A B 12 3.141 10.595 48.687 1.00 20.53 N
ATOM 23 C4 A B 12 3.884 11.376 47.884 1.00 20.53 C
ATOM 24 P U B 13 6.922 6.760 43.211 1.00 41.94 P
ATOM 25 OP1 U B 13 7.546 5.414 43.192 1.00 45.90 O
ATOM 26 OP2 U B 13 7.632 7.908 42.600 1.00 41.14 O
ATOM 27 O5' U B 13 5.465 6.664 42.579 1.00 39.38 O
TER
ATOM 2 P C A 14 1.688 7.788 42.620 1.00 24.53 P
ATOM 3 OP1 C A 14 0.554 8.454 41.944 1.00 27.41 O
ATOM 4 OP2 C A 14 2.921 8.564 42.916 1.00 22.25 O
ATOM 5 O5' C A 14 1.162 7.122 43.974 1.00 22.61 O
ATOM 6 C5' C A 14 0.053 6.221 43.954 1.00 24.46 C
ATOM 7 C4' C A 14 -0.301 5.721 45.350 1.00 26.18 C
ATOM 8 O4' C A 14 0.751 4.866 45.877 1.00 25.97 O
ATOM 9 C3' C A 14 -0.425 6.881 46.340 1.00 26.16 C
ATOM 10 O3' C A 14 -1.561 6.737 47.189 1.00 26.02 O
ATOM 11 C2' C A 14 0.900 6.924 47.101 1.00 24.85 C
ATOM 12 O2' C A 14 0.739 7.251 48.463 1.00 25.78 O
ATOM 13 C1' C A 14 1.324 5.460 47.022 1.00 27.77 C
ATOM 14 N1 C A 14 2.735 5.076 47.172 1.00 28.44 N
ATOM 15 C2 C A 14 3.063 4.165 48.188 1.00 34.79 C
ATOM 16 O2 C A 14 2.154 3.706 48.897 1.00 33.70 O
ATOM 17 N3 C A 14 4.354 3.809 48.370 1.00 33.62 N
ATOM 18 C4 C A 14 5.300 4.324 47.584 1.00 36.29 C
ATOM 19 N4 C A 14 6.564 3.946 47.798 1.00 40.18 N
ATOM 20 C5 C A 14 4.994 5.248 46.540 1.00 36.02 C
ATOM 21 C6 C A 14 3.709 5.590 46.369 1.00 33.12 C
ATOM 22 P C A 15 -2.920 7.515 46.870 1.00 25.84 P
ATOM 23 OP1 C A 15 -3.962 6.928 47.753 1.00 27.92 O
ATOM 24 OP2 C A 15 -3.122 7.534 45.397 1.00 26.40 O
ATOM 25 O5' C A 15 -2.638 8.995 47.365 1.00 22.88 O
TER
ATOM 1 O3' G B 11 11.325 7.033 47.308 1.00 22.12 O
ATOM 2 P A B 12 10.090 6.935 48.323 1.00 25.29 P
ATOM 3 OP1 A B 12 10.566 6.990 49.730 1.00 28.04 O
ATOM 4 OP2 A B 12 9.310 5.765 47.856 1.00 23.03 O
ATOM 5 O5' A B 12 9.227 8.234 48.001 1.00 21.52 O
ATOM 6 C5' A B 12 8.764 8.476 46.675 1.00 19.24 C
ATOM 7 C4' A B 12 7.258 8.367 46.618 1.00 20.51 C
ATOM 8 O4' A B 12 6.643 9.463 47.320 1.00 21.87 O
ATOM 9 C3' A B 12 6.659 8.435 45.224 1.00 24.64 C
ATOM 10 O3' A B 12 6.618 7.091 44.751 1.00 32.93 O
ATOM 11 C2' A B 12 5.246 9.009 45.439 1.00 23.83 C
ATOM 12 O2' A B 12 4.180 8.086 45.388 1.00 25.16 O
ATOM 13 C1' A B 12 5.322 9.596 46.852 1.00 21.46 C
ATOM 14 N9 A B 12 4.880 10.976 47.023 1.00 21.96 N
ATOM 15 C8 A B 12 5.338 12.120 46.422 1.00 21.43 C
ATOM 16 N7 A B 12 4.733 13.211 46.835 1.00 22.36 N
ATOM 17 C5 A B 12 3.811 12.751 47.765 1.00 19.23 C
ATOM 18 C6 A B 12 2.864 13.411 48.573 1.00 20.71 C
ATOM 19 N6 A B 12 2.686 14.734 48.578 1.00 18.63 N
ATOM 20 N1 A B 12 2.100 12.654 49.391 1.00 18.99 N
ATOM 21 C2 A B 12 2.284 11.329 49.393 1.00 21.04 C
ATOM 22 N3 A B 12 3.141 10.595 48.687 1.00 20.53 N
ATOM 23 C4 A B 12 3.884 11.376 47.884 1.00 20.53 C
ATOM 24 P U B 13 6.922 6.760 43.211 1.00 41.94 P
ATOM 25 OP1 U B 13 7.546 5.414 43.192 1.00 45.90 O
ATOM 26 OP2 U B 13 7.632 7.908 42.600 1.00 41.14 O
ATOM 27 O5' U B 13 5.465 6.664 42.579 1.00 39.38 O
TER
Atoms:
C2: (3.063,4.165,48.188)
OP1: (0.554,8.454,41.944)
OP2: (2.921,8.564,42.916)
C4: (5.300,4.324,47.584)
O5': (1.162,7.122,43.974)
C3': (-0.425,6.881,46.340)
C1': (1.324,5.460,47.022)
O4': (0.751,4.866,45.877)
C5': (0.053,6.221,43.954)
P: (1.688,7.788,42.620)
O2: (2.154,3.706,48.897)
C4': (-0.301,5.721,45.350)
C2': (0.900,6.924,47.101)
O2': (0.739,7.251,48.463)
N1: (2.735,5.076,47.172)
N3: (4.354,3.809,48.370)
N4: (6.564,3.946,47.798)
C6: (3.709,5.590,46.369)
C5: (4.994,5.248,46.540)
O3': (-1.561,6.737,47.189)
OP1: (0.554,8.454,41.944)
OP2: (2.921,8.564,42.916)
C4: (5.300,4.324,47.584)
O5': (1.162,7.122,43.974)
C3': (-0.425,6.881,46.340)
C1': (1.324,5.460,47.022)
O4': (0.751,4.866,45.877)
C5': (0.053,6.221,43.954)
P: (1.688,7.788,42.620)
O2: (2.154,3.706,48.897)
C4': (-0.301,5.721,45.350)
C2': (0.900,6.924,47.101)
O2': (0.739,7.251,48.463)
N1: (2.735,5.076,47.172)
N3: (4.354,3.809,48.370)
N4: (6.564,3.946,47.798)
C6: (3.709,5.590,46.369)
C5: (4.994,5.248,46.540)
O3': (-1.561,6.737,47.189)
OP1: (10.566,6.990,49.730)
OP2: (9.310,5.765,47.856)
C3': (6.659,8.435,45.224)
C1': (5.322,9.596,46.852)
C5': (8.764,8.476,46.675)
O4': (6.643,9.463,47.320)
C8: (5.338,12.120,46.422)
O2': (4.180,8.086,45.388)
C6: (2.864,13.411,48.573)
C5: (3.811,12.751,47.765)
C4: (3.884,11.376,47.884)
P: (10.090,6.935,48.323)
C4': (7.258,8.367,46.618)
C2': (5.246,9.009,45.439)
C2: (2.284,11.329,49.393)
N1: (2.100,12.654,49.391)
N3: (3.141,10.595,48.687)
N6: (2.686,14.734,48.578)
N7: (4.733,13.211,46.835)
N9: (4.880,10.976,47.023)
O5': (9.227,8.234,48.001)
O3': (6.618,7.091,44.751)
OP2: (9.310,5.765,47.856)
C3': (6.659,8.435,45.224)
C1': (5.322,9.596,46.852)
C5': (8.764,8.476,46.675)
O4': (6.643,9.463,47.320)
C8: (5.338,12.120,46.422)
O2': (4.180,8.086,45.388)
C6: (2.864,13.411,48.573)
C5: (3.811,12.751,47.765)
C4: (3.884,11.376,47.884)
P: (10.090,6.935,48.323)
C4': (7.258,8.367,46.618)
C2': (5.246,9.009,45.439)
C2: (2.284,11.329,49.393)
N1: (2.100,12.654,49.391)
N3: (3.141,10.595,48.687)
N6: (2.686,14.734,48.578)
N7: (4.733,13.211,46.835)
N9: (4.880,10.976,47.023)
O5': (9.227,8.234,48.001)
O3': (6.618,7.091,44.751)
Image (generated by PyMOL):