Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1928:A1927
Extra
PDB:
ATOM 1 O3' A A1927 96.722 116.172 110.010 1.00 58.39 O
ATOM 2 P C A1928 95.141 116.408 109.937 1.00 58.99 P
ATOM 3 OP1 C A1928 94.878 117.350 108.828 1.00 58.57 O
ATOM 4 OP2 C A1928 94.694 116.738 111.311 1.00 59.02 O
ATOM 5 O5' C A1928 94.612 114.946 109.579 1.00 58.71 O
ATOM 6 C5' C A1928 93.213 114.631 109.456 1.00 57.66 C
ATOM 7 C4' C A1928 92.977 113.159 109.768 1.00 57.29 C
ATOM 8 O4' C A1928 94.057 112.364 109.207 1.00 57.18 O
ATOM 9 C3' C A1928 92.968 112.794 111.244 1.00 56.77 C
ATOM 10 O3' C A1928 91.690 112.990 111.825 1.00 54.12 O
ATOM 11 C2' C A1928 93.397 111.331 111.256 1.00 58.46 C
ATOM 12 O2' C A1928 92.378 110.364 111.086 1.00 61.07 O
ATOM 13 C1' C A1928 94.361 111.280 110.074 1.00 58.07 C
ATOM 14 N1 C A1928 95.763 111.391 110.506 1.00 57.92 N
ATOM 15 C2 C A1928 96.298 110.421 111.374 1.00 58.84 C
ATOM 16 O2 C A1928 95.556 109.519 111.823 1.00 60.27 O
ATOM 17 N3 C A1928 97.603 110.493 111.706 1.00 58.58 N
ATOM 18 C4 C A1928 98.358 111.488 111.231 1.00 58.15 C
ATOM 19 N4 C A1928 99.650 111.510 111.553 1.00 57.97 N
ATOM 20 C5 C A1928 97.828 112.501 110.394 1.00 57.48 C
ATOM 21 C6 C A1928 96.544 112.413 110.057 1.00 57.47 C
ATOM 22 P C A1929 91.577 113.806 113.194 1.00 53.86 P
ATOM 23 OP1 C A1929 90.154 113.833 113.594 1.00 54.20 O
ATOM 24 OP2 C A1929 92.336 115.087 113.057 1.00 53.10 O
ATOM 25 O5' C A1929 92.341 112.874 114.226 1.00 54.77 O
TER
ATOM 1 O3' U B1926 98.569 117.621 103.962 1.00 57.20 O
ATOM 2 P A B1927 97.341 116.827 104.638 1.00 58.51 P
ATOM 3 OP1 A B1927 97.646 115.388 104.412 1.00 58.36 O
ATOM 4 OP2 A B1927 96.026 117.380 104.228 1.00 58.12 O
ATOM 5 O5' A B1927 97.488 117.087 106.192 1.00 57.40 O
ATOM 6 C5' A B1927 98.616 116.587 106.878 1.00 57.78 C
ATOM 7 C4' A B1927 98.200 115.933 108.156 1.00 58.65 C
ATOM 8 O4' A B1927 99.393 115.384 108.752 1.00 59.50 O
ATOM 9 C3' A B1927 97.605 116.899 109.168 1.00 58.49 C
ATOM 10 O3' A B1927 96.722 116.172 110.010 1.00 58.39 O
ATOM 11 C2' A B1927 98.801 117.261 110.027 1.00 59.14 C
ATOM 12 O2' A B1927 98.396 117.552 111.342 1.00 59.88 O
ATOM 13 C1' A B1927 99.592 115.960 110.006 1.00 60.20 C
ATOM 14 N9 A B1927 101.016 116.181 110.174 1.00 61.98 N
ATOM 15 C8 A B1927 101.888 116.861 109.360 1.00 62.19 C
ATOM 16 N7 A B1927 103.109 116.919 109.833 1.00 62.57 N
ATOM 17 C5 A B1927 103.035 116.217 111.026 1.00 62.60 C
ATOM 18 C6 A B1927 103.987 115.913 111.992 1.00 62.33 C
ATOM 19 N6 A B1927 105.258 116.289 111.904 1.00 62.65 N
ATOM 20 N1 A B1927 103.588 115.194 113.068 1.00 62.85 N
ATOM 21 C2 A B1927 102.306 114.808 113.143 1.00 63.43 C
ATOM 22 N3 A B1927 101.315 115.031 112.289 1.00 63.87 N
ATOM 23 C4 A B1927 101.754 115.750 111.242 1.00 63.10 C
ATOM 24 P C B1928 95.141 116.408 109.937 1.00 58.99 P
ATOM 25 OP1 C B1928 94.878 117.350 108.828 1.00 58.57 O
ATOM 26 OP2 C B1928 94.694 116.738 111.311 1.00 59.02 O
ATOM 27 O5' C B1928 94.612 114.946 109.579 1.00 58.71 O
TER
ATOM 2 P C A1928 95.141 116.408 109.937 1.00 58.99 P
ATOM 3 OP1 C A1928 94.878 117.350 108.828 1.00 58.57 O
ATOM 4 OP2 C A1928 94.694 116.738 111.311 1.00 59.02 O
ATOM 5 O5' C A1928 94.612 114.946 109.579 1.00 58.71 O
ATOM 6 C5' C A1928 93.213 114.631 109.456 1.00 57.66 C
ATOM 7 C4' C A1928 92.977 113.159 109.768 1.00 57.29 C
ATOM 8 O4' C A1928 94.057 112.364 109.207 1.00 57.18 O
ATOM 9 C3' C A1928 92.968 112.794 111.244 1.00 56.77 C
ATOM 10 O3' C A1928 91.690 112.990 111.825 1.00 54.12 O
ATOM 11 C2' C A1928 93.397 111.331 111.256 1.00 58.46 C
ATOM 12 O2' C A1928 92.378 110.364 111.086 1.00 61.07 O
ATOM 13 C1' C A1928 94.361 111.280 110.074 1.00 58.07 C
ATOM 14 N1 C A1928 95.763 111.391 110.506 1.00 57.92 N
ATOM 15 C2 C A1928 96.298 110.421 111.374 1.00 58.84 C
ATOM 16 O2 C A1928 95.556 109.519 111.823 1.00 60.27 O
ATOM 17 N3 C A1928 97.603 110.493 111.706 1.00 58.58 N
ATOM 18 C4 C A1928 98.358 111.488 111.231 1.00 58.15 C
ATOM 19 N4 C A1928 99.650 111.510 111.553 1.00 57.97 N
ATOM 20 C5 C A1928 97.828 112.501 110.394 1.00 57.48 C
ATOM 21 C6 C A1928 96.544 112.413 110.057 1.00 57.47 C
ATOM 22 P C A1929 91.577 113.806 113.194 1.00 53.86 P
ATOM 23 OP1 C A1929 90.154 113.833 113.594 1.00 54.20 O
ATOM 24 OP2 C A1929 92.336 115.087 113.057 1.00 53.10 O
ATOM 25 O5' C A1929 92.341 112.874 114.226 1.00 54.77 O
TER
ATOM 1 O3' U B1926 98.569 117.621 103.962 1.00 57.20 O
ATOM 2 P A B1927 97.341 116.827 104.638 1.00 58.51 P
ATOM 3 OP1 A B1927 97.646 115.388 104.412 1.00 58.36 O
ATOM 4 OP2 A B1927 96.026 117.380 104.228 1.00 58.12 O
ATOM 5 O5' A B1927 97.488 117.087 106.192 1.00 57.40 O
ATOM 6 C5' A B1927 98.616 116.587 106.878 1.00 57.78 C
ATOM 7 C4' A B1927 98.200 115.933 108.156 1.00 58.65 C
ATOM 8 O4' A B1927 99.393 115.384 108.752 1.00 59.50 O
ATOM 9 C3' A B1927 97.605 116.899 109.168 1.00 58.49 C
ATOM 10 O3' A B1927 96.722 116.172 110.010 1.00 58.39 O
ATOM 11 C2' A B1927 98.801 117.261 110.027 1.00 59.14 C
ATOM 12 O2' A B1927 98.396 117.552 111.342 1.00 59.88 O
ATOM 13 C1' A B1927 99.592 115.960 110.006 1.00 60.20 C
ATOM 14 N9 A B1927 101.016 116.181 110.174 1.00 61.98 N
ATOM 15 C8 A B1927 101.888 116.861 109.360 1.00 62.19 C
ATOM 16 N7 A B1927 103.109 116.919 109.833 1.00 62.57 N
ATOM 17 C5 A B1927 103.035 116.217 111.026 1.00 62.60 C
ATOM 18 C6 A B1927 103.987 115.913 111.992 1.00 62.33 C
ATOM 19 N6 A B1927 105.258 116.289 111.904 1.00 62.65 N
ATOM 20 N1 A B1927 103.588 115.194 113.068 1.00 62.85 N
ATOM 21 C2 A B1927 102.306 114.808 113.143 1.00 63.43 C
ATOM 22 N3 A B1927 101.315 115.031 112.289 1.00 63.87 N
ATOM 23 C4 A B1927 101.754 115.750 111.242 1.00 63.10 C
ATOM 24 P C B1928 95.141 116.408 109.937 1.00 58.99 P
ATOM 25 OP1 C B1928 94.878 117.350 108.828 1.00 58.57 O
ATOM 26 OP2 C B1928 94.694 116.738 111.311 1.00 59.02 O
ATOM 27 O5' C B1928 94.612 114.946 109.579 1.00 58.71 O
TER
Atoms:
C2: (96.298,110.421,111.374)
OP1: (94.878,117.350,108.828)
OP2: (94.694,116.738,111.311)
C4: (98.358,111.488,111.231)
O5': (94.612,114.946,109.579)
C3': (92.968,112.794,111.244)
C1': (94.361,111.280,110.074)
O4': (94.057,112.364,109.207)
C5': (93.213,114.631,109.456)
P: (95.141,116.408,109.937)
O2: (95.556,109.519,111.823)
C4': (92.977,113.159,109.768)
C2': (93.397,111.331,111.256)
O2': (92.378,110.364,111.086)
N1: (95.763,111.391,110.506)
N3: (97.603,110.493,111.706)
N4: (99.650,111.510,111.553)
C6: (96.544,112.413,110.057)
C5: (97.828,112.501,110.394)
O3': (91.690,112.990,111.825)
OP1: (94.878,117.350,108.828)
OP2: (94.694,116.738,111.311)
C4: (98.358,111.488,111.231)
O5': (94.612,114.946,109.579)
C3': (92.968,112.794,111.244)
C1': (94.361,111.280,110.074)
O4': (94.057,112.364,109.207)
C5': (93.213,114.631,109.456)
P: (95.141,116.408,109.937)
O2: (95.556,109.519,111.823)
C4': (92.977,113.159,109.768)
C2': (93.397,111.331,111.256)
O2': (92.378,110.364,111.086)
N1: (95.763,111.391,110.506)
N3: (97.603,110.493,111.706)
N4: (99.650,111.510,111.553)
C6: (96.544,112.413,110.057)
C5: (97.828,112.501,110.394)
O3': (91.690,112.990,111.825)
OP1: (97.646,115.388,104.412)
OP2: (96.026,117.380,104.228)
C3': (97.605,116.899,109.168)
C1': (99.592,115.960,110.006)
C5': (98.616,116.587,106.878)
O4': (99.393,115.384,108.752)
C8: (101.888,116.861,109.360)
O2': (98.396,117.552,111.342)
C6: (103.987,115.913,111.992)
C5: (103.035,116.217,111.026)
C4: (101.754,115.750,111.242)
P: (97.341,116.827,104.638)
C4': (98.200,115.933,108.156)
C2': (98.801,117.261,110.027)
C2: (102.306,114.808,113.143)
N1: (103.588,115.194,113.068)
N3: (101.315,115.031,112.289)
N6: (105.258,116.289,111.904)
N7: (103.109,116.919,109.833)
N9: (101.016,116.181,110.174)
O5': (97.488,117.087,106.192)
O3': (96.722,116.172,110.010)
OP2: (96.026,117.380,104.228)
C3': (97.605,116.899,109.168)
C1': (99.592,115.960,110.006)
C5': (98.616,116.587,106.878)
O4': (99.393,115.384,108.752)
C8: (101.888,116.861,109.360)
O2': (98.396,117.552,111.342)
C6: (103.987,115.913,111.992)
C5: (103.035,116.217,111.026)
C4: (101.754,115.750,111.242)
P: (97.341,116.827,104.638)
C4': (98.200,115.933,108.156)
C2': (98.801,117.261,110.027)
C2: (102.306,114.808,113.143)
N1: (103.588,115.194,113.068)
N3: (101.315,115.031,112.289)
N6: (105.258,116.289,111.904)
N7: (103.109,116.919,109.833)
N9: (101.016,116.181,110.174)
O5': (97.488,117.087,106.192)
O3': (96.722,116.172,110.010)
Image (generated by PyMOL):