Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2374:A2373
Extra
PDB:
ATOM 1 O3' A A2373 58.449 104.020 100.024 1.00 33.64 O
ATOM 2 P C A2374 57.400 103.983 98.809 1.00 31.61 P
ATOM 3 OP1 C A2374 57.629 102.778 98.000 1.00 34.38 O
ATOM 4 OP2 C A2374 57.428 105.308 98.159 1.00 29.81 O
ATOM 5 O5' C A2374 55.964 103.782 99.471 1.00 31.50 O
ATOM 6 C5' C A2374 55.739 103.932 100.879 1.00 31.43 C
ATOM 7 C4' C A2374 54.601 104.908 101.147 1.00 32.75 C
ATOM 8 O4' C A2374 54.516 105.070 102.589 1.00 34.62 O
ATOM 9 C3' C A2374 54.822 106.318 100.599 1.00 34.29 C
ATOM 10 O3' C A2374 54.161 106.585 99.376 1.00 35.04 O
ATOM 11 C2' C A2374 54.287 107.214 101.696 1.00 35.28 C
ATOM 12 O2' C A2374 52.881 107.347 101.643 1.00 36.34 O
ATOM 13 C1' C A2374 54.713 106.428 102.929 1.00 35.70 C
ATOM 14 N1 C A2374 56.146 106.646 103.252 1.00 35.09 N
ATOM 15 C2 C A2374 56.499 107.815 103.914 1.00 35.63 C
ATOM 16 O2 C A2374 55.622 108.670 104.139 1.00 36.81 O
ATOM 17 N3 C A2374 57.789 107.999 104.282 1.00 35.70 N
ATOM 18 C4 C A2374 58.711 107.081 103.979 1.00 34.47 C
ATOM 19 N4 C A2374 59.973 107.293 104.376 1.00 35.83 N
ATOM 20 C5 C A2374 58.387 105.905 103.263 1.00 32.64 C
ATOM 21 C6 C A2374 57.110 105.726 102.926 1.00 33.60 C
ATOM 22 P C A2375 54.678 107.785 98.448 1.00 35.77 P
ATOM 23 OP1 C A2375 53.794 107.817 97.281 1.00 34.72 O
ATOM 24 OP2 C A2375 56.129 107.567 98.259 1.00 35.78 O
ATOM 25 O5' C A2375 54.452 109.094 99.318 1.00 36.20 O
TER
ATOM 1 O3' U B2372 62.322 99.776 103.125 1.00 37.66 O
ATOM 2 P A B2373 62.520 100.111 101.589 1.00 37.95 P
ATOM 3 OP1 A B2373 62.130 98.925 100.815 1.00 37.68 O
ATOM 4 OP2 A B2373 63.881 100.685 101.440 1.00 35.46 O
ATOM 5 O5' A B2373 61.481 101.273 101.292 1.00 37.89 O
ATOM 6 C5' A B2373 60.119 101.214 101.690 1.00 35.88 C
ATOM 7 C4' A B2373 59.542 102.585 101.543 1.00 35.88 C
ATOM 8 O4' A B2373 60.473 103.489 102.203 1.00 37.51 O
ATOM 9 C3' A B2373 59.497 103.059 100.100 1.00 35.05 C
ATOM 10 O3' A B2373 58.449 104.020 100.024 1.00 33.64 O
ATOM 11 C2' A B2373 60.892 103.656 99.907 1.00 35.91 C
ATOM 12 O2' A B2373 61.052 104.571 98.845 1.00 35.69 O
ATOM 13 C1' A B2373 61.108 104.332 101.253 1.00 37.46 C
ATOM 14 N9 A B2373 62.520 104.484 101.628 1.00 38.37 N
ATOM 15 C8 A B2373 63.556 103.615 101.373 1.00 39.18 C
ATOM 16 N7 A B2373 64.708 104.004 101.863 1.00 39.62 N
ATOM 17 C5 A B2373 64.420 105.214 102.475 1.00 38.31 C
ATOM 18 C6 A B2373 65.221 106.126 103.176 1.00 37.55 C
ATOM 19 N6 A B2373 66.519 105.931 103.415 1.00 38.25 N
ATOM 20 N1 A B2373 64.634 107.254 103.638 1.00 36.97 N
ATOM 21 C2 A B2373 63.323 107.436 103.415 1.00 37.89 C
ATOM 22 N3 A B2373 62.461 106.644 102.782 1.00 37.59 N
ATOM 23 C4 A B2373 63.078 105.534 102.328 1.00 38.55 C
ATOM 24 P C B2374 57.400 103.983 98.809 1.00 31.61 P
ATOM 25 OP1 C B2374 57.629 102.778 98.000 1.00 34.38 O
ATOM 26 OP2 C B2374 57.428 105.308 98.159 1.00 29.81 O
ATOM 27 O5' C B2374 55.964 103.782 99.471 1.00 31.50 O
TER
ATOM 2 P C A2374 57.400 103.983 98.809 1.00 31.61 P
ATOM 3 OP1 C A2374 57.629 102.778 98.000 1.00 34.38 O
ATOM 4 OP2 C A2374 57.428 105.308 98.159 1.00 29.81 O
ATOM 5 O5' C A2374 55.964 103.782 99.471 1.00 31.50 O
ATOM 6 C5' C A2374 55.739 103.932 100.879 1.00 31.43 C
ATOM 7 C4' C A2374 54.601 104.908 101.147 1.00 32.75 C
ATOM 8 O4' C A2374 54.516 105.070 102.589 1.00 34.62 O
ATOM 9 C3' C A2374 54.822 106.318 100.599 1.00 34.29 C
ATOM 10 O3' C A2374 54.161 106.585 99.376 1.00 35.04 O
ATOM 11 C2' C A2374 54.287 107.214 101.696 1.00 35.28 C
ATOM 12 O2' C A2374 52.881 107.347 101.643 1.00 36.34 O
ATOM 13 C1' C A2374 54.713 106.428 102.929 1.00 35.70 C
ATOM 14 N1 C A2374 56.146 106.646 103.252 1.00 35.09 N
ATOM 15 C2 C A2374 56.499 107.815 103.914 1.00 35.63 C
ATOM 16 O2 C A2374 55.622 108.670 104.139 1.00 36.81 O
ATOM 17 N3 C A2374 57.789 107.999 104.282 1.00 35.70 N
ATOM 18 C4 C A2374 58.711 107.081 103.979 1.00 34.47 C
ATOM 19 N4 C A2374 59.973 107.293 104.376 1.00 35.83 N
ATOM 20 C5 C A2374 58.387 105.905 103.263 1.00 32.64 C
ATOM 21 C6 C A2374 57.110 105.726 102.926 1.00 33.60 C
ATOM 22 P C A2375 54.678 107.785 98.448 1.00 35.77 P
ATOM 23 OP1 C A2375 53.794 107.817 97.281 1.00 34.72 O
ATOM 24 OP2 C A2375 56.129 107.567 98.259 1.00 35.78 O
ATOM 25 O5' C A2375 54.452 109.094 99.318 1.00 36.20 O
TER
ATOM 1 O3' U B2372 62.322 99.776 103.125 1.00 37.66 O
ATOM 2 P A B2373 62.520 100.111 101.589 1.00 37.95 P
ATOM 3 OP1 A B2373 62.130 98.925 100.815 1.00 37.68 O
ATOM 4 OP2 A B2373 63.881 100.685 101.440 1.00 35.46 O
ATOM 5 O5' A B2373 61.481 101.273 101.292 1.00 37.89 O
ATOM 6 C5' A B2373 60.119 101.214 101.690 1.00 35.88 C
ATOM 7 C4' A B2373 59.542 102.585 101.543 1.00 35.88 C
ATOM 8 O4' A B2373 60.473 103.489 102.203 1.00 37.51 O
ATOM 9 C3' A B2373 59.497 103.059 100.100 1.00 35.05 C
ATOM 10 O3' A B2373 58.449 104.020 100.024 1.00 33.64 O
ATOM 11 C2' A B2373 60.892 103.656 99.907 1.00 35.91 C
ATOM 12 O2' A B2373 61.052 104.571 98.845 1.00 35.69 O
ATOM 13 C1' A B2373 61.108 104.332 101.253 1.00 37.46 C
ATOM 14 N9 A B2373 62.520 104.484 101.628 1.00 38.37 N
ATOM 15 C8 A B2373 63.556 103.615 101.373 1.00 39.18 C
ATOM 16 N7 A B2373 64.708 104.004 101.863 1.00 39.62 N
ATOM 17 C5 A B2373 64.420 105.214 102.475 1.00 38.31 C
ATOM 18 C6 A B2373 65.221 106.126 103.176 1.00 37.55 C
ATOM 19 N6 A B2373 66.519 105.931 103.415 1.00 38.25 N
ATOM 20 N1 A B2373 64.634 107.254 103.638 1.00 36.97 N
ATOM 21 C2 A B2373 63.323 107.436 103.415 1.00 37.89 C
ATOM 22 N3 A B2373 62.461 106.644 102.782 1.00 37.59 N
ATOM 23 C4 A B2373 63.078 105.534 102.328 1.00 38.55 C
ATOM 24 P C B2374 57.400 103.983 98.809 1.00 31.61 P
ATOM 25 OP1 C B2374 57.629 102.778 98.000 1.00 34.38 O
ATOM 26 OP2 C B2374 57.428 105.308 98.159 1.00 29.81 O
ATOM 27 O5' C B2374 55.964 103.782 99.471 1.00 31.50 O
TER
Atoms:
C2: (56.499,107.815,103.914)
OP1: (57.629,102.778,98.000)
OP2: (57.428,105.308,98.159)
C4: (58.711,107.081,103.979)
O5': (55.964,103.782,99.471)
C3': (54.822,106.318,100.599)
C1': (54.713,106.428,102.929)
O4': (54.516,105.070,102.589)
C5': (55.739,103.932,100.879)
P: (57.400,103.983,98.809)
O2: (55.622,108.670,104.139)
C4': (54.601,104.908,101.147)
C2': (54.287,107.214,101.696)
O2': (52.881,107.347,101.643)
N1: (56.146,106.646,103.252)
N3: (57.789,107.999,104.282)
N4: (59.973,107.293,104.376)
C6: (57.110,105.726,102.926)
C5: (58.387,105.905,103.263)
O3': (54.161,106.585,99.376)
OP1: (57.629,102.778,98.000)
OP2: (57.428,105.308,98.159)
C4: (58.711,107.081,103.979)
O5': (55.964,103.782,99.471)
C3': (54.822,106.318,100.599)
C1': (54.713,106.428,102.929)
O4': (54.516,105.070,102.589)
C5': (55.739,103.932,100.879)
P: (57.400,103.983,98.809)
O2: (55.622,108.670,104.139)
C4': (54.601,104.908,101.147)
C2': (54.287,107.214,101.696)
O2': (52.881,107.347,101.643)
N1: (56.146,106.646,103.252)
N3: (57.789,107.999,104.282)
N4: (59.973,107.293,104.376)
C6: (57.110,105.726,102.926)
C5: (58.387,105.905,103.263)
O3': (54.161,106.585,99.376)
OP1: (62.130,98.925,100.815)
OP2: (63.881,100.685,101.440)
C3': (59.497,103.059,100.100)
C1': (61.108,104.332,101.253)
C5': (60.119,101.214,101.690)
O4': (60.473,103.489,102.203)
C8: (63.556,103.615,101.373)
O2': (61.052,104.571,98.845)
C6: (65.221,106.126,103.176)
C5: (64.420,105.214,102.475)
C4: (63.078,105.534,102.328)
P: (62.520,100.111,101.589)
C4': (59.542,102.585,101.543)
C2': (60.892,103.656,99.907)
C2: (63.323,107.436,103.415)
N1: (64.634,107.254,103.638)
N3: (62.461,106.644,102.782)
N6: (66.519,105.931,103.415)
N7: (64.708,104.004,101.863)
N9: (62.520,104.484,101.628)
O5': (61.481,101.273,101.292)
O3': (58.449,104.020,100.024)
OP2: (63.881,100.685,101.440)
C3': (59.497,103.059,100.100)
C1': (61.108,104.332,101.253)
C5': (60.119,101.214,101.690)
O4': (60.473,103.489,102.203)
C8: (63.556,103.615,101.373)
O2': (61.052,104.571,98.845)
C6: (65.221,106.126,103.176)
C5: (64.420,105.214,102.475)
C4: (63.078,105.534,102.328)
P: (62.520,100.111,101.589)
C4': (59.542,102.585,101.543)
C2': (60.892,103.656,99.907)
C2: (63.323,107.436,103.415)
N1: (64.634,107.254,103.638)
N3: (62.461,106.644,102.782)
N6: (66.519,105.931,103.415)
N7: (64.708,104.004,101.863)
N9: (62.520,104.484,101.628)
O5': (61.481,101.273,101.292)
O3': (58.449,104.020,100.024)
Image (generated by PyMOL):